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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021655 ID=TCONS_00021655|Name=TCONS_00021655|organism=Clytia hemisphaerica|type=transcript|length=971bp
taaatatatgttttgaattttaataatttagacCCACCGCTGACCCCTTT
CCTTTTTATGTACGTATTTGCATGGTTAGAATTATCATTGTtagttgatt
taaaatttagttaCGTACAAGGAAAGGCTCCAAAGACCAATATTGCCGAA
ATTGATTTCAATTAACTAGTCTCATATTTATCAAATTGCCAttaattatt
taaaatttatcataatGTTGAAAAGGTTTAGTATGAATCAAAtcttaatt
aaactttttcattttgttaattggtcaattttcttgaaaacaaatACACA
TATAACATATTTCACAGACctaaattgaaatttaatttttgcagtgtttt
taaaCATCATCATCACAAATAACTAGTGTTGAAAATGTGTTAAGAAGCTG
CAATTCTACAGTGACAAGCTTTTAACAACTTGACAGCATATACATGTCAC
TGTCGTCTTCTTGAACCAATATTTTTTAGCATTCATAGCACAATCTAGAG
TTGTAACCTAAACTAAAATGTGATTGTTATATTAAGTAACTAATAAGATa
actttttctctaaaaaagaggaactggacattcaaaagccaatcttaaat
tttgtgaaaatgttacAATTATTACAAGATAATCATAATAAAACGCCATT
TTTGTGGCAATCATAAAATACATTTAGAAACAAAGGAACGTACTTATTAA
AGGATGCTGAACGCATTATATTGGTTTTCAATTCGTTTATATAATGTTAA
TCTCGAAATggatttatttgaaaatgttatcctAAAAAATTTGTTCTCAT
TATTAAATAtaggttttgaattttaataatttagacCCACCGCTGACCCC
TTTCCTTTTTATGTACGTATTTGCATGGTTAAAATTATCATTGTTAGTTG
ATTTAGAATTTAGTTACGTACAAGGAAAGGCTCCAAAGATAGAAATTGCC
GAAATTGATTTCAATTAACTA Run BLAST on NCBI transcript from alignment at sc0000391:278865..281416- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021655 ID=TCONS_00021655|Name=TCONS_00021655|organism=Clytia hemisphaerica|type=transcript|length=2552bp|location=Sequence derived from alignment at sc0000391:278865..281416- (Clytia hemisphaerica)
TAAATATATGTTTTGAATTTTAATAATTTAGACCCACCGCTGACCCCTTT
CCTTTTTATGTACGTATTTGCATGGTTAGAATTATCATTGTTAGTTGATT
TAAAATTTAGTTACGTACAAGGAAAGGCTCCAAAGATCAAAATTGCCGAA
GTCGATTTCAATTAACTAGTCTCATATTTAACAGATTGCCATTAATTATT
GAAAATTTATTATAATGTTGAAAAGGTTTAGTATCAATCAAATCTTAATT
AAAGTTTTTCATTTCGTTAGTTGGTCAATTTTCTTGAAAACAAATACACA
TATAACATATGTCACAGACCTAAAATGAAACTTGATTTTTGCAGTGTTTT
TAAACATCATCATCATAAATAACTACTGTTGAAAGTGTATTAAGAAGCTG
CAAACCTACAGTGACAAGCTTCTAAAAACTTGANNNNNNNNNNNNNNNNN
GTCTTCTTGAACCAATATTTTTTGGCATTCATAGAACAATCTAGAGTCGT
AACCTAAACTAAAATGCGATTGTTACATTAAGTGAGTAATAAGATAACTT
TTTTTCTAAAAAAGAGGAACTGAACATTCAAAAGCCAATCTTAAATTTTG
TGAAAATGTTACAATTATTACAAGATAATCATAATAAAACAACATCTTTG
TGGCAATGATAAAATACATTTAGAAAAAAAGAAACGTATTTATTGAAGGA
AGCTGAACGCATTATCTTAGTTTTCAATTTTTTGTATAATGGTAACCTCA
AAATGGATTTATTTCAAAATGTGATTAATCATCATTAATAATATGTTTTG
AATTTTAATAATTTAGACCCGCCACTGACCCCTTTCCTTTTTATGTACGT
ATTTGCATGGTTTAAATTTTCATTGTTAGTCGATTTAAAATTTAGTTATG
TACAATGAAAGGCTCCAAAGACCGAAATTGCCGAAATTGATTACAATTAA
CTAGTCTCATATTTATCAAATTGCCATTAATTATTGAAAATTTATTATAA
TGTTGAAAAAGTTTAGTATCAATTAAATCTTAATTAAACTTTTTCATTTC
GTTAGTTGGTCAATTTTCTTGAAAACAAATACACATATAACATATGTCAC
AGACCTAAAATGAAACTTAATTTTTGCAATGTTTTTAAAAATCATCATCA
TTAATAACTACTGTTGAAAGTGTATTAAGAAGCTGCAAACCTACAGTGAG
AAACTCCTAAAAACTTGACAGCATATATATGTCACTCTCGTCTTCTTGAA
CCAATATTTTTTGGCATTCATAGAACAATCTAGAGTCGTAACCTAAACTA
AAATGCGATTGTTACATTAAGTGAGTAATAAGATACCTTTTTTATTTAAA
AAAGAGGAACTGGACATTCAAAAGCCAATCTTGAATTTTTTGAAAATGTT
ACAGTATTACAAGATAATTATAATAAAACACCATCTTTGTAGCAATCATA
AAATACATTTAGAAGCAAAGAAACGTACTTATTGAAGGATGCTGAACGTA
TTGTTTTCAATTTTTGGTATAATGGTAACCTCAAAATGGATTCATTTGAA
AATCTTATTCTAATAGATTTTTTCTCATTATTTAATATATATTGCGAATT
TTAATAATTTAAACCCACCACTGACCCCTTTCCTTTTTATGTACGTATTT
GCATGATTTAAATTTTCATTGTTATTTGATTTAAAATTTAGTTACGTACA
AGGAAAGGCTCCAAAGACCAATATTGCCGAAATTGATTTCAATTAACTAG
TCTCATATTTATCAAATTGCCATTAATTATTTAAAATTTATCATAATGTT
GAAAAGGTTTAGTATGAATCAAATCTTAATTAAACTTTTTCATTTTGTTA
ATTGGTCAATTTTCTTGAAAACAAATACACATATAACATATTTCACAGAC
CTAAATTGAAATTTAATTTTTGCAGTGTTTTTAAACATCATCATCACAAA
TAACTAGTGTTGAAAATGTGTTAAGAAGCTGCAATTCTACAGTGACAAGC
TTTTAACAACTTGACAGCATATACATGTCACTGTCGTCTTCTTGAACCAA
TATTTTTTAGCATTCATAGCACAATCTAGAGTTGTAACCTAAACTAAAAT
GTGATTGTTATATTAAGTAACTAATAAGATAACTTTTTCTCTAAAAAAGA
GGAACTGGACATTCAAAAGCCAATCTTAAATTTTGTGAAAATGTTACAAT
TATTACAAGATAATCATAATAAAACGCCATTTTTGTGGCAATCATAAAAT
ACATTTAGAAACAAAGGAACGTACTTATTAAAGGATGCTGAACGCATTAT
ATTGGTTTTCAATTCGTTTATATAATGTTAATCTCGAAATGGATTTATTT
GAAAATGTTATCCTAAAAAATTTGTTCTCATTATTAAATATAGGTTTTGA
ATTTTAATAATTTAGACCCACCGCTGACCCCTTTCCTTTTTATGTACGTA
TTTGCATGGTTAAAATTATCATTGTTAGTTGATTTAGAATTTAGTTACGT
ACAAGGAAAGGCTCCAAAGATAGAAATTGCCGAAATTGATTTCAATTAAC
TA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021655-exon-sc0000391-1575043694:281291..281416 | TCONS_00021655-exon-sc0000391-1575043694:281291..281416 | Clytia hemisphaerica | exon |
| TCONS_00021655-exon-sc0000391-1575043694:278865..279709 | TCONS_00021655-exon-sc0000391-1575043694:278865..279709 | Clytia hemisphaerica | exon |
| TCONS_00021655-exon-sc0000391-1510915933:281291..281416 | TCONS_00021655-exon-sc0000391-1510915933:281291..281416 | Clytia hemisphaerica | exon |
| TCONS_00021655-exon-sc0000391-1510915933:278865..279709 | TCONS_00021655-exon-sc0000391-1510915933:278865..279709 | Clytia hemisphaerica | exon |
| TCONS_00021655-exon-sc0000391-1491911889:281291..281416 | TCONS_00021655-exon-sc0000391-1491911889:281291..281416 | Clytia hemisphaerica | exon |
| TCONS_00021655-exon-sc0000391-1491911889:278865..279709 | TCONS_00021655-exon-sc0000391-1491911889:278865..279709 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000391 | supercontig | sc0000391:278865..281416 - |
Blast
The following BLAST results are available for this feature:
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