TCONS_00018287 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018287
Unique NameTCONS_00018287
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1239

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018287 ID=TCONS_00018287|Name=TCONS_00018287|organism=Clytia hemisphaerica|type=transcript|length=1239bp
GACGACAAAAGAAGGGTTATGTTGTGGTTATTTTAGGTAAATAAAATGGA
GCAGTTATTGAATAACAAAAGTATGAGGGAACTAACACCAGAAGAGAAGT
GGAGGCAGGACCATGAAAAGCTACACGCTAAGCACAGAGGTCACGAAGCA
ATGCATTTGGAAATGGTGCTCATTCTTTTTGCCACTTTATTTGTGATGCA
AATAGTGCTGTTTAAATGGCAACAAATGCACAGCAGATCGTACAAGatGG
TGACGTTGATAGGGATGTGGGTCTTCCCTTTCATCTTCACAGTAAGGCAT
GGATGGTATCGGATGATATCTGTATGGTCGATCTTCACAATCATCACACT
CTTTGTCATATGGAAAGCCACCAGGTTTCCTGTAAACCCAACAACCCCAA
GGCTCGTATACAAATGGTTTTACAACGTGCATCGTGTAACATATGCTTTA
GGAATCATCGGTTACCTAATTATCATGATGACTTTCATGGGGTTCAACGT
GTTGCTGCTCATCAAGCCTGAATTCTCAATGCAAGCTGGTGTCATTATCA
TATTTTATGGACTTTATTATGGTGTGCTAGGTAGAGATTGTGCTGAGTTG
TGTGCAGATAAAATGGCTGCTAAAATGGGGTACTACAGTGAGACTGGTCT
ACCTTCCAAGCGTCTGATGCCAAACATCTGTGCAGTGTGTGGTCAGGAGT
TGACGCTGACAGCTATGGAAGATATGGAAGAGGATGATACTGAGAAAAGT
TATAAATTATCTTGTGGTCATTTattCCACGAGTTTTGTATACGTGGTTG
GTGCATCGTCGGGAAGAAACAGACCTGTCCGTATTGTAAAGAAAAAGTCG
ATCTTAAAAGAATGTTCAAGAATCCATGGGAACGACCTCACATTTTATTT
GGACAACTGTTGGATTGGTTGCGTTATTTCATCGTATGGCTTCCAGTCAT
CATTCTCGTAACACGTGGTATTAATTACGAACTGGGGCTAGAATGAAATT
GTACAGTCAAacccaaatttcaaaaaggctCAAAAATTCGATTTAGTCTC
CCAACGGATGAGATTTGTTCTTACATGGAACGttataatactaaaatcaa
acaaatttcTGACAATGAATTGGTAGAAAAAACTTTTCCGTTTGTTGCAC
GCACAAGTTCATCATTGCCAACAAAGTAATGTCTGTCATACAATAAAAGA
TGTACCAATATGGTGAATTAGGGTTACAAGATTTTATAC
Run BLAST on NCBI

transcript from alignment at sc0000295:131203..141874-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018287 ID=TCONS_00018287|Name=TCONS_00018287|organism=Clytia hemisphaerica|type=transcript|length=10672bp|location=Sequence derived from alignment at sc0000295:131203..141874- (Clytia hemisphaerica)
GACGACAAAAGAAGGGTTATGTTGTGGTTATTTTAGGTTTTGGAAATCAA
ACTGTTACCATTTACTAGGGTTGTTTAAAAGTATTCTTTTTTTGATCTGA
TTATTAATATTCAATGGTCTGCTGATAGACCCATGTAGCTCTATTATCAA
GATCTCCCCTTCTTAGGTAAATAAAATGGAGCAGTTATTGAATAACAAAA
GTATGAGGGAACTAACACCAGAAGAGAAGTGGAGGTAAAAGTAGTGTGAT
CAAATTCATCAAATTCATCATTGATTTCTGCCCGACTCATAGTTTGAAAA
TCCATTTTTCTGACGTTATTTTCGCAGAAATGGGTGTTACCGACTCATTT
TATTTTTGCCTAAAAACGATGCAAACACAAGTTATTTGTGATTGTAGCCT
TATTAAAACTGCTAAACTAACTTAATGTGTTACACCAATCTCAGTAGTGT
AATCAAACGCTCAGTAGGTATCCTTTTATCATTGTTTTAACCACAGCACA
AAGCAATATGTCCCAAACACTTGAGTTCTAGAGTCCATTTGCTTCAAGTT
TGAACTCTTTTTTTATACTTTATGGAAACTATGTCAGTGTAATTAGACTA
ACGCCCTTGAGCATGGTAATGAACTTTTGTAATGAAGCTTTTGTAGGTCT
TAGCTTTTCAACCTAACAACATTGGTATCAATTCGAAAGCGATTCTTTAT
AGACCCAAATTTTATTCTTATATTTTATATCTTGTTTTTAATATTTATAT
ATCTTAAATCATGACATTACGTGTAATTTCATGTGATATTCAAGTCTTTT
AAAAAACATTGTCTCCTTTGTTTTACAGGCAGGACCATGAAAAGCTACAC
GCTAAGCACAGAGGTCACGAAGCAATGCATTTGGAAATGGTGCTCATTCT
TTTTGCCACTTTATTTGTGATGCAAATAGTGCTGTTTAAATGGCAACAAA
TGCACAGCAGATCGTACAAGGTATTTCTTTGTAAATCTTTTTTTATAAAA
GTACAGAATTTGGTAAAAGCAAAAGCTATGTGGAGGGACTGAAGGAGAAT
TTAAAAATTGCATTCCATAGCAATAGAGAAAAAAGCCAACTGCATTTGCC
AGCGCTGTGTTTTGAGGTTGTAAAGATGAATCAAAGTACCTTTCTTTCAA
CTACCATGCCTGTCATGGTGACAGTGATCTTACTACTTCAGTGACGTGCT
CCTTTCCTATTTAAATTGATTGCTTCAATAGCAAAAAATATAAAATTGTT
AAATTTTTTATGGAGTATGGGTTTAATTTTATCTTCAGTTCTTAAAATAG
TATCCATACCATCAAAAAACAGATATGATCCTTTCTTAGCCCCTTAAGAA
TATGGGTGACGTGGGAAGAATGAAAACACTTGCATAAAATCGTAAAAGCA
TGATTGACGGGTCTTTCTTGCCTTTGATTGGCCAATACTTGTAAACATGC
AAATTCAAATCATTAAGATGGGGTATGATTTGTGAAATGTGGGGAAAGTT
TTAAAGAATTTGTTCAGACTGAATGATTACAGATTTCTTTTTTTTTGCAG
ATGGTGACGTTGATAGGGATGTGGGTCTTCCCTTTCATCTTCACAGTAAG
GCATGGATGGTATCGGATGATATCTGTATGGTCGATCTTCACAATCATCA
CACTCTTTGTCATATGGAAAGCCACCAGGTTTCCTGTAAACCCAACAACC
CCAAGGTACGTAATTCAGTTATTCTGAAAGATTTGGTTTTTGTACCCAAA
ATTTCACAAAAGTTTTTTATATTTGTCTTCTATCTTCTCGTTAACTCGGC
TGGATATAATACAATGATCAAAAGATTGCTTGAATTAAAGTTCCTACCAG
ATTGTTTAAGGGAGGAATTTGCAAAGAACGAAATTCAAAAATAATACAAT
TTACTAAATGTAAGGGTTATTTTGATGCTAAACTACTGGTCAATTGACAT
AGTGTGCAACCCCCCAGAATAGTGGGGGGGGGGTTTGCTGTTTTGGGTCA
GAAATTTCTAGATTTTTTTACTGTTCTAGGCTTTTCTCTTTTTTATTATT
ATACTGTAATTTCTTCAGGGGGAGGGATCTAAAATCTCGGTCATATAATA
TGAATCATACTAAAGTATTTTGGAGAATGTCTTGTATACCACCACCTTAA
TTTTGACAAGTGGTATTTTAGTACCCTTGCCAGTCCTTGAATTAAATATT
TTAAAGACATTAGGACACAAAGACCACCCAATTTTGGTATTTTCGAGACA
GATTTTGTCTTCTCAGAACCATTTTCCTCGCGAGTGCTGATTTTATGCAA
GATGATATCTATTTTCCTCAAAAATCTATTAAACAATGCTGCTTCTGAAT
TGAGCAAACATTAAAGATATTTGATTGAANNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNCAATAATTTTTGTTTACCTTCTTCGTATTAGTATAATTTTTC
ATGGGGATAGTAGTTTTAGCTGGGATCTGGGAGTCTGGATTGGAGGTGGG
AAATTTAGGGTTAGGTGGGACCTGGAACCCCCATTGCACACTATGATTGA
ATTAAATTTAAACATTAAGTTCTTTGCCATTACTGGTTAGAAATAACGAA
ACTGGTGCTTATCTGTCCTTTTCAGGCTCGTATACAAATGGTTTTACAAC
GTGCATCGTGTAACATATGCTTTAGGAATCATCGGTTACCTAATTATCAT
GATGACTTTCATGGGGTTCAACGTGTTGCTGCTCATCAAGCCTGAATTCT
CAATGCAAGCTGGTGTCATTATCATATTTTATGGACTTTATTATGGTGTG
CTAGGTAGAGATTGTGCTGAGTTGTGTGCAGATAAAATGGCTGCTAAAAT
GGGGGTAAGAGAATAATTTAGCTTTTGTATCCAGGGAGACTTATAAAAAT
ACTTTTTATCATTCCCTTTCTTTATTAGAGACCCATTGACCTGTACCAAC
CAATGTTTTGATTTAATATGAAACCCTCTTTAATAAATAAACTCATTGTT
CTTATGCAATGGTTTATGCTTTTGAAGAACGAAGAGTGTATTAAAAAGTT
TACTCGAGAAAATTCACATAAACTCCTAAGTGTACAGAGAGACGAACATG
ATCTTTTTTTTACTTCTCACAAATTTAGTACTACAGTGAGACTGGTCTAC
CTTCCAAGCGTCTGATGCCAAACATCTGTGCAGTGTGTGGTCAGGAGTTG
ACGCTGACAGCTATGGAAGATATGGAAGAGGATGATACTGAGAAAAGTTA
TAAATTATCTTGTGGTCATTTGTATCCTTTTCTCTCATTGGTTGATTTTG
CAATACACGTTTCTTATGATGACACCTCCATCACAAACATATTTTTTGAG
GACTATAATCAAATTAGCCTCCCTCATGACCATCTTACCACCTTTTTATT
TTGGCTAATAATTCGCTAAATGAGAGGAGGTAGGTGGGTGATTGCATGCA
CCCTAAAAATGAAAGCTGACAAAAAGGTCGAAGATTTGTCTCCTGTTTTT
GTGGGATTTGGTATTTCTGATTTTGGCCTCTTGACCTGAATAAGCTTATG
AGAAGTTTCAAGAACTGAACATCCTCTAACTAAAAGACACTCGCAGAGAC
CTACACTCTTTTTGGACCTACCTCCGGGTACCCCGGTGGAGGTTCTATAA
ATTAACCCATGTCCGTTCGTCCGTCCGTCCGTTCGTCCGTCCGTCTGTTA
CCAGCTTTTCTCAGGATTGGCTCATTAGTTTTTTCNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAATCCTGTCATTACTTT
TTTCTGATTTTTTGTACAAAGATGGAGGGCAAGATTCTCTAAAGAATGGC
TGAAGTGGTTTTTCCTGGAAAATTCTTATTCCCCTTAAAAAACGGATTTT
CGTATTTTGGGGAAATTCCCTTTAACCAAATAAGAAAATATAGCTTTTCT
CAAAGTTGGCTCATTAGTTTTTTCTGATTTTTTGCACAATGATGCAAAAT
GGCAATGCCCAGAACGTGACGGAGCCCGATTTTTGAGAAAAAATTTATTT
GGGCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTGAAGTGGTTTTTCCCGGAAAATTCTTATTCGCCTTAAA
AAACGGATTTTCGTATTTTGGGGAAATTCCCTTTAACCAAATAAGAAAAT
ATAGCTTTTATCAATGTTGACTCGTTATTTTTTTCTAATTTGTTGCACAA
TGATGCAAAATGGCAATGCCTAATATGTGTCGGAGCCCGATTTTCGAAAA
AAAATATATTTGGGCAAATTTGGGCCAAAAACTGCCTAAAAATAGGGTTT
TTTGGACTTGGTGCAAAATCCTGTCGTTACTTTTTTCTGATTTTTTGTAC
AAAGATGGAGGGCAAGATTCTCTAAAGAATGGCTGAAGTGGTTTTTCCTG
GAAAATTCTTATTCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTTTTAAGGAAAATTTTTTGGGCAAATTTGGGCCAAAAACAGC
TTAAAAGGTTTTTTGGGCCTGAATGGTTTAAGTGATTTTCGTATTTGGGG
AAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNCTAATTCTTTCTAGATCAGGAGATATAAGCCCTTAAAG
TTTGAACTAGCGATTTTTAAAAAAAAACTTAGAAAAAAAGACCCTGGCAC
TCAAAGGGTTAATCCAGTCAAATTCATGGTTCTTATGTACCCTATATGGT
TTTTCCAAATTTTGTTTTACCGAAAACAGTAATATCTCTTCTCATCAGTG
AATGTAATTTATGATAATACTAGCTGTTCCGGTGTCGTCGGAGACGACTT
TGCTGCAATTTTTTTTCTCGCTAACTTTAAATGTGCCATCCAGCTCTCGG
TAATTTGAAAAACTTTGGTGTTAAGATAATGGACATGGAATGAGATTCTT
CAGGCAATGGCGGAAAATACATGTGGGTCATCCATTTAGTACGTACGCAA
AAAATGTCCAAATATTTGACACCACCTTCCCTGCGTACGTACTACATGGA
TTTTTTCTGTGGTTCATTGTCAACACCGATATCTTTTTCCTTGACAGAAA
ATTTATTTTAGATTCCACGAGTTTTGTATACGTGGTTGGTGCATCGTCGG
GAAGAAACAGACCTGTCCGTATTGTAAAGAAAAAGTCGATCTTAAAAGAA
TGTTCAAGAATCCGTATCCTTTTCATCGTAGATATTGCTGAAAATTGGTC
GGTTTTTTTATAGGCTTTTGATCTTTGGTATGAAGTAAATAGTTTTGATT
TGTTCAGATTATCACGTCAAGACCCTTACCATCAATCATAAACCCTTATA
CTTCTTCAAACAGATCACAGTTGATTATACTTTATTGTTTTGAATTGGTG
TCAAATGCTTAAGATTCTCTCACATAATGGAATGCAGAGCTCCCTGTGTT
ACTTTTTTGTTATTACAAATGACTTTAAAATGGCTATGCTTTTTATGGGT
AGTTTTATTGGACTTGTAGCCTGATTTGGTTTTGTTGAAAATTTCAAGGT
TCAGTTTATTAGTGCTTAAAGGTTATTTTATTATGCTATTAATCAAAATA
GATCAATTAGTTTACCAAAAAGAAGTTAGTCTTCCCTTCTAGCGAAAACT
ATTGGTAGTATAAGTCTGCGAATCAAAGCGAGAAGTTTAATAAGTTATGT
TCTCAACGTGTCTGATGCTATCTATCTATCATCTTTCTTTGACCACCTTC
ATCGCGTAAACAATGTTTAGATGGGAACGACCTCACATTTTATTTGGACA
ACTGTTGGATTGGTTGCGTTATTTCATCGTATGGCTTCCAGTCATCATTC
TCGTAACACGTGGTATTAATTACGAACTGGGGCTAGAATGAAATTGTACG
GTCAAACCCAAATTTCAAAAAGGCTCAAAAATTCGATTTAGTCTCCCAAC
GGATGAGATTTGTTCTTAACTGGAACGTTATAATACTGAAATCAAACAAA
TTTCTGACAATGAATTGGTAGAAAAAACTTTTCCGTTTGTTGCACGCACA
AGTTCATCATTGCCAACAAAGTAATGTCTGTCATACAATAAAAGATGTAC
CAATATGGTGAATTAGGGTTACAAGATTTTATACACAGAAAGATGACATG
GAACAAAACAATTTTACTTCACATCCTAGCAATAGGGATCTTGTCGCTAC
AATTTTTACCTTTTTAACATCCATGTTTCATTATCCCTAGAAAAACGATA
GGGCGACACTTCTGTAGACTGAATTTCTGGTATTGCATCTGAGATTTGGA
GGTTTATTGTATATTTTGAAAGTTTATTTTTAATGTTCAATCTCTGAAGG
GGCTTCACAGGGTCAAACTACTCAGCAAACATTGAGGTTTTTCAAATTCA
GTGGATTTGATCGAAACGGATGAAACGTGGGTGTTCTTATTTTAGATAGG
GTCTAAATTAGGAATTGAATAATTAGTTATTTTGAATAATTTTCGAAACG
GTTCTGATTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTTTTTGGGCCTGAATGGTTTAAGTGATTTTCGTATTTGGGGA
AATTCCTTTTTACCATTTTACATTATTCAACACACAAGCTTTATTTTTCC
ATTCTGAATTTTTTTACAATTATTGTCACTTTTTTCTTATTTTCATCTGA
TGTTAATCATTAGGTAGGTCCATTCAGCATGTTGCTTGTTTTTCTCAAAA
GTTTGTTTAACCGCTATGGATGATTTTATGGATTGTCGTTAACCCTTTAA
GTGCCGATGTCGTATATATACGACATGGGCTATATAGGAGGGCGAAGCCC
TCCTGTAATGCCCAGTTTGAGTTAGAAATCGTTATTTTTTGTNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTAAACA
ATGTTTAGATGGGAACGACCTCACATTTTATTTGGACAACTGTTGGATTG
GTTGCGTTATTTCATCGTATGGCTTCCAGTCATCATTCTCGTAACACGTG
GTATTAATTACGAACTGGGGCTAGAATGAAATTGTACAGTCAAACCCAAA
TTTCAAAAAGGCTCAAAAATTCGATTTAGTCTCCCAACGGATGAGATTTG
TTCTTACATGGAACGTTATAATACTAAAATCAAACAAATTTCTGACAATG
AATTGGTAGAAAAAACTTTTCCGTTTGTTGCACGCACAAGTTCATCATTG
CCAACAAAGTAATGTCTGTCATACAATAAAAGATGTACCAATATGGTGAA
TTAGGGTTACAAGATTTTATAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010269XLOC_010269Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018287-exon-sc0000295-1575043694:141839..141874TCONS_00018287-exon-sc0000295-1575043694:141839..141874Clytia hemisphaericaexon
TCONS_00018287-exon-sc0000295-1575043694:141641..141708TCONS_00018287-exon-sc0000295-1575043694:141641..141708Clytia hemisphaericaexon
TCONS_00018287-exon-sc0000295-1575043694:140905..141046TCONS_00018287-exon-sc0000295-1575043694:140905..141046Clytia hemisphaericaexon
TCONS_00018287-exon-sc0000295-1575043694:140170..140324TCONS_00018287-exon-sc0000295-1575043694:140170..140324Clytia hemisphaericaexon
TCONS_00018287-exon-sc0000295-1575043694:138321..138549TCONS_00018287-exon-sc0000295-1575043694:138321..138549Clytia hemisphaericaexon
TCONS_00018287-exon-sc0000295-1575043694:137904..138046TCONS_00018287-exon-sc0000295-1575043694:137904..138046Clytia hemisphaericaexon
TCONS_00018287-exon-sc0000295-1575043694:135212..135313TCONS_00018287-exon-sc0000295-1575043694:135212..135313Clytia hemisphaericaexon
TCONS_00018287-exon-sc0000295-1575043694:131203..131566TCONS_00018287-exon-sc0000295-1575043694:131203..131566Clytia hemisphaericaexon
TCONS_00018287-exon-sc0000295-1510915933:141839..141874TCONS_00018287-exon-sc0000295-1510915933:141839..141874Clytia hemisphaericaexon
TCONS_00018287-exon-sc0000295-1510915933:141641..141708TCONS_00018287-exon-sc0000295-1510915933:141641..141708Clytia hemisphaericaexon
TCONS_00018287-exon-sc0000295-1510915933:140905..141046TCONS_00018287-exon-sc0000295-1510915933:140905..141046Clytia hemisphaericaexon
TCONS_00018287-exon-sc0000295-1510915933:140170..140324TCONS_00018287-exon-sc0000295-1510915933:140170..140324Clytia hemisphaericaexon
TCONS_00018287-exon-sc0000295-1510915933:138321..138549TCONS_00018287-exon-sc0000295-1510915933:138321..138549Clytia hemisphaericaexon
TCONS_00018287-exon-sc0000295-1510915933:137904..138046TCONS_00018287-exon-sc0000295-1510915933:137904..138046Clytia hemisphaericaexon
TCONS_00018287-exon-sc0000295-1510915933:135212..135313TCONS_00018287-exon-sc0000295-1510915933:135212..135313Clytia hemisphaericaexon
TCONS_00018287-exon-sc0000295-1510915933:131203..131566TCONS_00018287-exon-sc0000295-1510915933:131203..131566Clytia hemisphaericaexon
TCONS_00018287-exon-sc0000295-1491911889:141839..141874TCONS_00018287-exon-sc0000295-1491911889:141839..141874Clytia hemisphaericaexon
TCONS_00018287-exon-sc0000295-1491911889:141641..141708TCONS_00018287-exon-sc0000295-1491911889:141641..141708Clytia hemisphaericaexon
TCONS_00018287-exon-sc0000295-1491911889:140905..141046TCONS_00018287-exon-sc0000295-1491911889:140905..141046Clytia hemisphaericaexon
TCONS_00018287-exon-sc0000295-1491911889:140170..140324TCONS_00018287-exon-sc0000295-1491911889:140170..140324Clytia hemisphaericaexon
TCONS_00018287-exon-sc0000295-1491911889:138321..138549TCONS_00018287-exon-sc0000295-1491911889:138321..138549Clytia hemisphaericaexon
TCONS_00018287-exon-sc0000295-1491911889:137904..138046TCONS_00018287-exon-sc0000295-1491911889:137904..138046Clytia hemisphaericaexon
TCONS_00018287-exon-sc0000295-1491911889:135212..135313TCONS_00018287-exon-sc0000295-1491911889:135212..135313Clytia hemisphaericaexon
TCONS_00018287-exon-sc0000295-1491911889:131203..131566TCONS_00018287-exon-sc0000295-1491911889:131203..131566Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000295supercontigsc0000295:131203..141874 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.42499	6.02675	0.00120774	4.10031	5.88082	1.85811	7.78553	7.21848	13.5532	11.4532	9.11537	9.56406	8.64024	7.05661	12.0571	9.95958	11.874	11.8918	6.37708	9.22186	7.94699	10.5775	14.0717	14.7607	0.00317275	6.24904	6.80487	3.56756	17.6959	17.0851
Blast
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BLAST of TCONS_00018287 vs. Swiss-Prot (Human)
Match: RN121 (RING finger protein 121 OS=Homo sapiens GN=RNF121 PE=1 SV=1)

HSP 1 Score: 415.616 bits (1067), Expect = 2.247e-143
Identity = 189/315 (60.00%), Postives = 244/315 (77.46%), Query Frame = 1 
Query:   49 EQLLNNKSMRELTPEEKWRQDHEKLHAKHRGHEAMHLEMVLILFATLFVMQIVLFKWQQMHSRSYKMVTLIGMWVFPFIFTVRHGWYRMISVWSIFTIITLFVIWKATRFPVNPTTPRLVYKWFYNVHRVTYALGIIGYLIIMMTFMGFNVLLLIKPEFSMQAGVIIIFYGLYYGVLGRDCAELCADKMAAKMGYYSETGLPSKRLMPNICAVCGQELTLTAXXXXXXXXTEKSYKLSCGHLFHEFCIRGWCIVGKKQTCPYCKEKVDLKRMFKNPWERPHILFGQLLDWLRYFIVWLPVIILVTRGINYELGLE 993
            E+ L+   M +L+PEE+WR +H ++HAKHRGHEAMH EMVLIL ATL V Q++L +W+Q H RSY MVTL  MWV P  FTV+  W+R + +W +F+ +T FV ++ATR P+  TTPRLVYKWF  +++++YA GI+GY+ +M T  G N+L  IKPE +M  G+ ++FYGLYYGVL RD AE+CAD MA+ +G+YSE+G+P+K L  ++CAVCGQ++ +      EE   E +Y+LSC H+FHEFCIRGWCIVGKKQTCPYCKEKVDLKRMF NPWERPH+++GQLLDWLRY + W PVII V +GINY LGLE
Sbjct:   16 ERELDEVDMSDLSPEEQWRVEHARMHAKHRGHEAMHAEMVLILIATLVVAQLLLVQWKQRHPRSYNMVTLFQMWVVPLYFTVKLHWWRFLVIWILFSAVTAFVTFRATRKPLVQTTPRLVYKWFLLIYKISYATGIVGYMAVMFTLFGLNLLFKIKPEDAMDFGISLLFYGLYYGVLERDFAEMCADYMASTIGFYSESGMPTKHLSDSVCAVCGQQIFVDV---SEEGIIENTYRLSCNHVFHEFCIRGWCIVGKKQTCPYCKEKVDLKRMFSNPWERPHVMYGQLLDWLRYLVAWQPVIIGVVQGINYILGLE 327
The following BLAST results are available for this feature:
BLAST of TCONS_00018287 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RN1212.247e-14360.00RING finger protein 121 OS=Homo sapiens GN=RNF121 ... [more]
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