TCONS_00017728 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017728
Unique NameTCONS_00017728
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length141

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017728 ID=TCONS_00017728|Name=TCONS_00017728|organism=Clytia hemisphaerica|type=transcript|length=141bp
CGACCAGTGAAAAATACTGAAGTGGTAACACCATGACAATCTGGTTAACA
CTAAAACAATGATAATTTTTCCGCTTTTCAGTTTACAACAAGAATTCCAA
AAATAAACtcgtaaaaatataaaaaataaagtttgtgaCGN
Run BLAST on NCBI

transcript from alignment at sc0000273:347008..347148

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017728 ID=TCONS_00017728|Name=TCONS_00017728|organism=Clytia hemisphaerica|type=transcript|length=141bp|location=Sequence derived from alignment at sc0000273:347008..347148 (Clytia hemisphaerica)
NCGtcacaaactttattttttatatttttacgaGTTTATTTTTGGAATTC
TTGTTGTAAACTGAAAAGCGGAAAAATTATCATTGTTTTAGTGTTAACCA
GATTGTCATGGTGTTACCACTTCAGTATTTTTCACTGGTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009928XLOC_009928Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017728-exon-sc0000273-1491911889:347008..347148TCONS_00017728-exon-sc0000273-1491911889:347008..347148Clytia hemisphaericaexon
TCONS_00017728-exon-sc0000273-1510915933:347008..347148TCONS_00017728-exon-sc0000273-1510915933:347008..347148Clytia hemisphaericaexon
TCONS_00017728-exon-sc0000273-1575043694:347008..347148TCONS_00017728-exon-sc0000273-1575043694:347008..347148Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000273supercontigsc0000273:347008..347148 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017728 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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