TCONS_00001618 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001618
Unique NameTCONS_00001618
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4586

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001618 ID=TCONS_00001618|Name=TCONS_00001618|organism=Clytia hemisphaerica|type=transcript|length=4586bp
ACCTTTtttttcttatgccgaagccAGTCAAAGTGATGTCAAACAGTCAG
GTCAATAAAGTTAAAGTAATTTTGCATTGTGACCAAGAATCATTTTAAAT
CTTCAATATTATTCAGGAAAagataataaaataaatatgttaGACTTAAC
TGTAAACCAAATagatgaatttgaaaatgttattaagATGAAGGAAGATA
ACTCAAACAGTGACGATGAGCCCATTATCAACATTAAGAAGAAAAGGGAA
ACAAAGAAGCTCTCTTATGACGAAGTGTCTGGAAGTTCTCCGTCGGATAG
TGGTGTTGATGATAACGACAGTGACTTTAAACCTGATGAAAGTGAAAAAc
ccaaaacaaaaaaagcatCAATGAAGAAAAAGAGTTCACCAAAGAAGCCT
ATGAAAAAAGCATCTAAGAAAGCAATGGTTGACAAAACAAATGATGGTGG
GAAAATTATGGGAGATAGCGAAGTCAGTGGTGTAAGCAGTGATTCATCAT
CTTCGTCCTCTGAAGATGACAATGCTACATTTGCTcaaaaaattcgtcaa
aaacgtCAACGTCAAGATTTGAACTCATCTCAAAACAAAAGTCCTACTGC
TACAAGTAACCAAATCACTGAACCAAAGAAAAAGGTTGAATTAGACTCTT
CAGAAGATGAGCTATATGACGAGGTTGTTAAAAATATTCCATCTAAAAAA
AAGGAAACTGCCAAAGCACAGAAAACGAAACCCAAAGTAGGAAAATCtaa
accaaaaaagaaaattgtatCAAGTGGAGACGACGATTCTGAGCCCAACC
ACGATTCTGAGCCCAACCACGATTCTGAGCCCAACCACGATTCTGAGCCC
AACCACGATTCTGAGCCCAACTATGAAGGGTCAGATTCAGACGAAATTGT
CCACAAAATATCTCCAAAGCGAAAGAGTGTCAAGTCAAAAAAGAAGAGAG
TCAAGAATTTTGAATCAAGTGACAGTGAAGTCATTGAAGGAGGTGAACAA
TCTGAAGATTCATTATTTGGTGACTCAAATTCTGATACAGAAAAGCCTtc
aaaaaggaacaaaaagaaatctaagcgtcaaaataaacgaaaatcaAAGA
GCACGATTCATTCTGACGATGATAATGAGAAATCAAACAACAGTGGTACA
GATTCTGAACAGGATGAAAAAGATTTGGATAAAGAGATGAAACACCTTGA
TCAAAGTGATATCAAACCTAAGAAGAAGAGACAGGCTGCAAAAGAGAGTG
AAAGAGCATGGAAAGAAATCAGGAGTGAGCAGCAAAGGTTACAAAGAGAG
AGAAAATGTGAAATTCCTTACCATGAACCAAAAGCCAAATCTGTCAAAGA
GTTTTTGAAGCGTGTTCCAAACCTGACATCAACAAGGACATGTAAATCAC
CTGGAAGTGATGGTATTATCAACCTAGCAAATGAAACAGATACTCCACCA
AAGAAATCCATTTTCTCAAGCTTTCCCACTTTGAAACCTGAGACCAATGG
TGATTTTGAATTTGTCTTCAACGATGATGGTGACAATGTAGAATCAAAGA
AACAAGCAAAAACTCCTAAACCAGTGACCAATTTTATCAAGaAATTTGAA
AGACAAGTGAAGACACCATCTTCTGAGAGTAAACAAGTCAACAGTAAAAA
ATCACCTGAAAAGCCTTCTCTATCAAATACTCAACTGAAGATAGACTTGA
AACAGAAGATTCGGCAACAACGACAAAAACAGATGGAACAACTCGAAGAA
AAACGTAAGAAGTTGGAAGAACAAATTGCATTGGAAGAAGGGGATGAATC
GTTTGATGATGCAATCGATGATGAAAGTGATTCGAGTAACAGTGAACATG
AAGAAGGGTCAGCTGATGAGGAGATAGAGAAATGGAATCTGGAGGATAAT
CGAATTCGTTTAGAAGAATCGATTGCGGAAACTGAACAAAACGACAAGAA
CAAcaaagaagaagaacaaaaagaagaaagcgATGAGAAAATGGAGACTA
CAACTGAAGAttcaaactctaattttgttgattttcaacGTGTACCAACT
CAATTATTGAAAAGTGATATCTTGAACTCTACAAGTACAACTGATGGCTT
CCAACGAAAGgaTTCGTTTTTGTCATTACCCTGTGAAAACACTCAAGACC
TTTACAAAGACGACAGTCGAGTTTCATTACCACAAGACTCAGATGACGAG
AGTGAAAACGAGCTGGGACCAAATTTCCATCTATCTTTGGACGAAGAGAC
GCAATACTCTCAATCGCTTTTAGATTCGCAGGGATTCTTGAAGAAAGACA
AGAAAGACAAATTCGAAAAACCAAAagaagaacatccaaaattgtttGGA
AATAAAAGCACAGACGATAACACATCAAACCAATCATTCTCCATGACCCA
AATGTTAGGTTTATGTTCTGGTAAATTTGACGATTCAAACAGTATCCCGT
TGACAATGtcttcttccaaaggctctaacaaTCGCCAACATCAATGTTCA
TTGGATTTTCAAGATGAGAATGCCAATAATTCATTTTCACATTTCACATT
TCGACAAAGCAATGAAGGAGCCACACAGACTCGGGAAAAAGGTCAATCTC
AATCGCAATTCAATTTTGCATCTTCGTTCACTGAGAAAAGTCAGGATAAC
ACCGACAAGGAGAAAGAGATCGGAAGTGAAACTAAATCAAACGATGACAA
CGCCACTGATAACAGCACCAATACGGATATACTGAAGAGTAGTGATAATA
CAAAcaatacttttgaaaataaagaaatcataACTACTGATGAAAAGGAG
GAGATATCTCTGGACAAAGATCAAGTAGCGGGggaagaaaataatgaaat
gaataAATCAGACAGTGTTGAAAGCTCAGTAGATCTAAATGATAAGAAAC
TTGGAGATGATAAAACTAAAGAGAATACAGATAATAGAGATAATGATAAA
GAAAAAGCTGTTAATGACGGAGATAATAGTTTTCAACCTGATGGAGATAA
CCAAGAAGACAATGACGGAGATAATGATGTGGGACATGATGGAGATAATA
ACGAAGATGATGGAGATAACCAAGAAGAAAATGACGGAGATAATGAAGAG
GGACATGATGGAGATAATAACGAAGATGATGGAGATAACCAAGAAGAAAA
TGACAGAGATAATGAAGAGGGGGACGGGTCACATTATGGAGAAGATGAGG
AGgattatgaaaaagaaaatgaagagttGAAAGAATGGAATCTACACCTT
CAGGAATCACAAAGCAACACCAAGAAAAAATGGAAGAAGAAAGCTTTCTA
TGAAGATGAAGCTGAGTTATCCGGAAGTGACGTCGGATCAGATGACGAGG
ATCTGGGCAGTGAATATGATGAATACGAAGTAGACTCTGATATTGAGAAT
CTCCCCGATGATGAAAAACTGAAGAAACAGTTGCATAAAATTCACCAGAA
GAAAATGAATGATAAAGACAAACACGAAATGCGCTTGTTGCAAGAGCTCT
ACCTCGAAGATGAATTCGGTGGTGGCGAGAAACGAAAACGTAACTTTCGT
TGGCGAAATGTTGACGACAATTTTAACGACAATAATCGTTTGAATAAGGA
AGTCGACGAAGCTGATAATTATTCGGAATTGAAAGAACGAAATCAAGAAA
TGGTGGAACGGaataaatttcttttggaaGTCGAAGAGgagcagAAAAAT
AAAGAGATAGAAATTGACGAAAACAGTCAAATGATATTGGACAAAATCCA
AGCTTCTGGCGAAAAACATGTTTCTTCAAGTCAGCCAATTCAAGTTGGTG
AAGTCAGTCAACGTGTTCCACTTAGAAGATCTGGCTcgtttcttcaaaat
aaaaaatcacaaaaatttcaaaagaacttGTCGTTACCAAATATGCCCAA
GTCAATCGGCAAGAAAGCAAATTCGTTTGTTTTCCAAGCTTTAGAAGAat
caaagaaaacgaaaaagAATTCGACATCGGACGATAAAATGGCACCACCT
CGCAAACGACAGAAAAGCAACAATGATAACCAAAAAGCACCGAGACTAAC
GGCTAAAAGTATTTTTGCTCTTCTATAGCCCTCCACAATGATGATTTTTT
ATACGATTTTGATGTACatattaataataatttttgagAATCGCTAGTTT
AAAATTTGGTAGGAAGCTTATGtttcatgttttatttttattctaaaCCA
CATCCAACCACTCTTTCGGTTTTGTTGTACATATAATTACAAATGGGAAT
CTTCTTCTATGATTTTCTccctaccttaagggaactcaTTTTCatggtcg
aaaaaaaaattcaaaaaatcgcatttcgcgggaattaattttcgtggTTT
TCCCTATTTTGGACACATCTCTTTAATTTTCCTAGATATGGTAAAATGGC
CAAATTTGTGATTCGAGGGTTCTACCCTTAAGGTAGTTCGAGATATAGTT
AATAAAGTGTCATCTCCCTTGGCAAAATCCCTTCGCTTTATAACCTGATT
GTACCCTATAAAACTTGACCaaatttcttgttgtttttttgtaaatataa
tCTATataaatttagttttttgaaGTTATTTTAGTC
Run BLAST on NCBI

transcript from alignment at sc0000011:943350..954885+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001618 ID=TCONS_00001618|Name=TCONS_00001618|organism=Clytia hemisphaerica|type=transcript|length=11536bp|location=Sequence derived from alignment at sc0000011:943350..954885+ (Clytia hemisphaerica)
ACCTTTtttttcttatgccgaagccAGTCAAAGTGATGTCAAACAGTCAG
GTCAATAAAGTTAAAGTAATTTTGCATTGTGACCAAGAATCATTTTAAAT
CTTCAATATTATTCAGGAAAagataataaaataaatatgttaGACTTAAC
TGTAAACCAAATagatgaatttgaaaatgttattaagATGAAGGAAGATA
ACTCAAACAGTGACGATGAGCCCATTATCAACATTAAGAAGAAAAGGGAA
ACAAAGAAGCTCTCTTATGACGAAGTGTCTGGAAGTTCTCCGTCGGATAG
TGGTGTTGATGATAACGACAGTGACTTTAAACCTGATGAAAGTGAAAAAc
ccaaaacaaaaaaagcatCAATGAAGAAAAAGAGTTCACCAAAGAAGCCT
ATGAAAAAAGCATCTAAGAAAGCAATGGTTGACAAAACAAATGATGGTGG
GAAAATTATGGGAGATAGCGAAGTCAGTGGTGTAAGCAGTGATTCATCAT
CTTCGTCCTCTGAAGATGACAATGCTACATTTGCTcaaaaaattcgtcaa
aaacgtCAACGTCAAGATTTGAACTCATCTCAAAACAAAAGTCCTACTGC
TACAAGTAACCAAATCACTGAACCAAAGAAAAAGGTTGAATTAGACTCTT
CAGAAGATGAGCTATATGACGAGGTTGTTAAAAATATTCCATCTAAAAAA
AAGGAAACTGCCAAAGCACAGAAAACGAAACCCAAAGTAGGAAAATCtaa
accaaaaaagaaaattgtatCAAGTGGAGACGACGATTCTGAGCCCAACC
ACGATTCTGAGCCCAACCACGATTCTGAGCCCAACCACGATTCTGAGCCC
AACCACGATTCTGAGCCCAACTATGAAGGGTCAGATTCAGACGAAATTGT
CCACAAAATATCTCCAAAGCGAAAGAGTGTCAAGTCAAAAAAGAAGAGAG
TCAAGAATTTTGAATCAAGTGACAGTGAAGTCATTGAAGGAGGTGAACAA
TCTGAAGATTCATTATTTGGTGACTCAAATTCTGATACAGAAAAGCCTtc
aaaaaggaacaaaaagaaatctaagcgtcaaaataaacgaaaatcaAAGA
GCACGATTCATTCTGACGATGATAATGAGAAATCAAACAACAGTGGTACA
GATTCTGAACAGGATGAAAAAGATTTGGATAAAGAGATGAAACACCTTGA
TCAAAGTGATATCAAACCTAAGAAGAAGAGACAGGTACTTATTAATggtc
ttttgatattttatttttggttttgaaaattttatttcattcaatTAGGT
ATTGCAGGAACTAGACTTAATTTTGATTATTGATTAATAGTTTAGACTAT
GGGTAAAGACTACCCATCAAATCGAAATTCATTCTCTTCTAATTTTATTG
TCTCCGATAGAAGATTTACTTTAACAGTTTGTTTCAAGGGAAAAGGATGA
CAAGTTACAAATAACACCAAATACAACTGAATACAACACACGAACCTTGT
TTCAATAACTAagtaattttaagtaattctaAATAATAGTTTCCATTTGT
AgatttatgatatttttctcAGAATTTCTCCACGTTTTCCCCATATTTCT
ATTAAGGCTGCAAAAGAGAGTGAAAGAGCATGGAAAGAAATCAGGAGTGA
GCAGCAAAGGTTACAAAGAGGTAAATAATACATTATTTCTTAACAAAATC
ATtgttgataaacattttttgttgCAAAATTTCCTGGCATCAAAATTTAC
GTTTCAGGTTGAAATGAAAATGGTTAAATCCAACCAACTTAGATTATAAA
AGTTTTAGTGATGCTGATATTAGATGCTACTTTGAACTtgcattttttgt
attttttttccagAGAGAAAATGTGAAATTCCTTACCATGAACCAAAAGC
CAAATCTGTCAAAGAGTTTTTGAAGCGTGTTCCAAACCTGACATCAACAA
GGACATGTAAATCACCTGGAAGGtattattgttttcatttattaaGAATT
ACATTGTAAATGTGACTCTTCAACCTTAGAATGAGTTACGATTCAAAGGA
ACATGTTTGGAAAATACAGTCTTTTTATTACACATCCTATAATATACCAA
AGTATAGTTACAATGATGACGACATTAATGAAATTTAACATCACACTTGA
TAAGTTTCTCTCTTATTAAATgattaaataattaaataataataaaataa
tacaataaataCAATTGTTTTTCCTATTTAGTGATGGTATTATCAACCTA
GCAAATGAAACAGATACTCCACCAAAGAAATCCATTTTCTCAAGCTTTCC
CACTTTGAAACCTGAGACCAATGGTGATTTTGAATTTGTCTTCAACGATG
ATGGTGACAATGTAGAATCAAAGAAACAAGCAAAAACTCCTAAACCAGTG
ACCAATTTTATCAAGGTGcgctaaaaaataatttatgctattttttcaaa
aactcttATTATAATTAAAGTCCATTCTCTTTTTTAAGTGTGCTCTAATT
CCTGTTttgtttgtcatttttcaatgaATGCTTCATTCCTATCATATCTG
ATCATATTTTATATACCAGTGGAAAAATAGTGCAGAGTActataaattct
tgaaaaataactcttttaaaggattttagaaaatgaagatgaaaaataaa
aaagaagaaaaatgaatctTACTAATCAGGTTAGAAGGTGCTAGATAGGT
TCACCTGCCAGTGCTTCAATTACAANAGTGATGCTGATATTAGGTGCTAC
TTTGAACTtgcattttttgtattttttttccagAGAGAAAATGTGAAATT
CCTTACCATGAACCAAAAGCCAAATCTGTCAAAGAGTTTTTGAAGCGTGT
TCCAAACCTGACATCAACAAGGACATGTAAATCACCTGGAAGGtattatt
gttttcatttattaaGAATTACATTGTAAATGTGACTCTTCAACCTTAGA
ATGAGTTACGATTCAAAGGAACATGTTTGGAAAATACAGTCTTTTTATTA
CACATCCTATAATATACCAAAGTATAGTTACAATGATGACGACATTAATG
AAATTTAACATCACACTTGATAAGTTTCTCTCTTATTAAATgattaaata
attaaataataataaaataatacaataaataCAATTGTTTTTCCTATTTA
GTGATGGTATTATCAACCTAGCAAATGAAACAGATACTCCACCAAAGAAA
TCCATTTTCTCAAGCTTTCCCACTTTGAAACCTGAGACCAATGGTGATTT
TGAATTTGTCTTCAACGATGATGGTGACAATGTAGAATCAAAGAAACAAG
CAAAAACTCCTAAACCAGTGACCAATTTTATCAAGGTGcgctaaaaaata
atttatgctattttttcaaaaactcttATTATAATTAAAGTCCATTCTCT
TTTTTAAGTGTGCTCTAATTCCTGTTttgtttgtcatttttcaatgaATG
CTTCATTCCTATCATATCTGATCATATTTTATATACCAGTGGAAAAATAG
TGCAGAGTActataaattcttgaaaaataactcttttaaaggattttaga
aaatgaagatgaaaaataaaaaagaagaaaaatgaatctTACTAATCAGG
TTAGAAGGTGCTAGATAGGTTCACCTGCCAGTGCTTCAATTACAACTCAA
ACCACAATGTTTTGATCATATGGCTGTGAAGTTAAAGTCTCCCTCATTCT
ATctatttatattttctttcagaAATTTGAAAGACAAGTGAAGACACCAT
CTTCTGAGAGTAAACAAGTCAACAGTAAAAAATCACCTGAAAAGCCTTCT
CTATCAAGTAAGTGGTTTAGTGGCTTCAGTGCTTCAAACTTTCAACCATC
CTATTCAGATTCACTGATATGGCTAAACTTTCTCCAACAATCTCAATGAA
ATTTTCTATGAATTTTCATTCTTCTCAAGATACTCAACTGAAGATAGACT
TGAAACAGAAGATTCGGCAACAACGACAAAAACAGATGGAACAACTCGAA
GAAAAACGTAAGAAGTTGGAAGAACAAATTGCATTGGAAGAAGGGGATGA
ATCGTTTGATGATGCAATCGATGATGAAAGTGATTCGAGTAACAGTGAAC
ATGAAGAAGGTATTCTTTTCAAGAAGCTCAATAAATTATCATGCCTCAAG
TGACTAGTTTTAGGGGTCATTTTAGTTTTAGGGACAATTTAATGATTGGC
TATAATAATTCCCTTAGTCAATATTATTTGCAAAGCTAAttgatgaatat
ttttttctatatttgaaaataatttatttgttGAAAAATCCTATTAGAAT
ATCATTTATCAGATCATAGAAAAAACTTCACCTACAAGAAGTTAAATTCA
CGGGAATGATCCCACCGAAAAACCTCCaagttttaagaaaaaaagtgtaC
CTAATTTGCTTTTCGAGTTTGAATACGAgtcttaaaacttaaaaaaataa
tgaatgtGGGGAAAGGGATTCTATTAAGGTTCTAGGggtcataaaaatgt
aaaattaacAAACAGGCACCTGAGAGTATAATTTATCTAACATTCAACAT
accatcatttttattaaagGGTCAGCTGATGAGGAGATAGAGAAATGGAA
TCTGGAGGATAATCGAATTCGTTTAGAAGAATCGATTGCGGAAACTGAAC
AAAACGACAAGAACAAcaaagaagaagaacaaaaagaagaaagcgATGAG
AAAATGGAGACTACAACTGAAGAttcaaactctaattttgttgattttca
acGTGTACCAACTCAATTATTGAAAAGTGATATCTTGAACTCTACAAGTA
CAACTGATGGCTTCCAACGAAAGGTAAAAACTTTCTCTTCCATCAGACag
ataacacccctgtgtcagacTTGGTAACACAAATGCTCAAAATTTCCTCC
CGGGTGGCAAAAGTTACTGCCCTGGTACTGGGAAATTGATTTAAATCAAC
ATTCGATATACAAgggaaaaattgcactccaaaactatccccACTGGATG
TTTATCCCTTATcgagatttcgatagaaatgtTTATCCCCTGTTGTGGAA
AAAAATTCCACCGTAGTCTTGGGATTGGGGTGTTAGATATAATTGTCTTC
TTAAGATAATTTACTATAATTTGGTTTTGGGAAACAATGTAAAATGATCT
TCACTTCCATACATATACATAATAGTCCATATATTTAatgttttactttc
ttttttttcaaggaTTCGTTTTTGTCATTACCCTGTGAAAACACTCAAGT
AAGTTCGTCGATACTTATCATTTTCAAATTGGTTGATCCTCCTGAATGAg
ttcaataaaaatttcaaacacagaagcgacttcattttattttcataaaa
tcaaaaatttatttaagacGTTTCGGTGTCATCCGACCACCATCATCagt
ttaaaaacattgaaatgaaaatttctaaataaatttttgattttatgaaa
ataaaatgaagtcgcttctgtgtttgaaatttttatcattttcagaattt
catAGGAGCTGTTGTATTCATCATTTTCATACAAATCTGAGGTTATGTTA
CTAAGCTGGAGACAGGCTCTTAATCCTGGgcaagcaaaattttttgacca
aagtttttttgaattgataCCTTATTGGTAGCTATTagtactcaatagcg
gtgtaatgCATCGAAAGCCTTCCTTGATACAGCACCTTTTATTAGGAAAG
CTTTAACACTTCAATGACTTCATTGTGGGTACCACTTCTAAAAAAAGCTC
CAATCAAAGATTGCAGATATAGCTCAGCAAGGGTTTGTAAAGGCCAGTGG
TTACGAACTATACTATTTTTAGTGGATAATCTTCTTCTTCTTAATCTTTC
AGCCAATACTGTCAAAAGATTTCGTCTACTTGGTACTATAATCGACTCAC
TATCTTTTAGGACCTTTACAAAGACGACAGTCGAGTTTCATTACCACAAG
ACTCAGATGACGAGAGTGAAAACGAGCTGGGACCAAATTTCCATCTATCT
TTGGACGAAGAGACGCAATACTCTCAATCGCTTTTAGATTCGCAGGGGTA
CGTGTACTGAGGCAAATTTATGAAATTCAATGATCCTGGAAATTCGCCAG
GAATGTTTTGCCGGATGAGAAAATTTCCGAGAACCTTCTTATATATCCAT
AAGCAACTGATAATTTAGACCAATAAAGAATAAAAGCAAGTCCGAGAAAA
TTCATCACGCCAAGATATTCAaagcaaaagatgaaaattttgatttaaaa
acagcTATATTTCGTATAGTATCATATACATCATTCAGGCAAATGATTTC
TGTAAAAGNCACTTGAAAAGgctcgtccaccccctgtatggaaattttat
ggaacagccctttcaaagcaaaagatgaaaattttgatttaaaaatagcT
ATATTTGGTATAGTATACATCATTCAGGCAAATGATTTCTGTAAAACAAA
AGTTGAGCTTGAAAAcgatttcaaaatctaaaacaatTAAATGACTAATT
AAAATGCAGTAAAACTAAGAAAATAGATACAAATCTCTAGAGGCTTTAAG
GCCATTATTCAAAATAGGAGAATGCCTTTTGATATAAATTGCttctttta
ttaaaagaatattCCATTTATCAGACCTATCAATAATACGAGTGTTATTT
TCTATTGTGTTCAAAAAATAttccttttgttcttttttgtttaatggttt
ttgttCAAACAAGAGCATTTTGTAAATATGTATATATAAGACAACAGTTT
CCAATATTAAAAGATGACGACATTAGAACTCCTTTAAtcggataaatttt
cgcgaggtTTAATTTAGCTTTTATATAGCGACTTTCGATAAATTTTGTAC
TGATTTGCAaaaataaatccagaaaatttcgcgtcAATCTGATTAAATTA
CTCGACTTCTGTCCGTCAAATAGCAAGTAATTTATCCtaaaaaatatgat
ttagatTTACAGCAATTTGTTTTCCTCAAATACTAATGATGTTAATAATT
TTTCCCTTCTTAGATTCTTGAAGAAAGACAAGAAAGACAAATTCGAAAAA
CCAAAagaagaacatccaaaattgtttGGAAATAAAAGCACAGACGATAA
CACATCAAACCAATCATTCTCCATGACCCAAATGTTAGGTTTATGTTCTG
GTAAATTTGACGATTCAAACAGTATCCCGTTGACAATGtcttcttccaaa
ggctctaacaaTCGCCAACATCAATGTTCATTGGATTTTCAAGATGAGAA
TGCCAATAATTCATTTTCACATTTCACATTTCGACAAAGCAATGAAGGAG
CCACACAGACTCGGGAAAAAGGTACATACGTGCAGATTAGTGTTGGATTT
TGTTAAATCTCGAAACACaaatcttttttaattcaaagtaTCCTTTTCCT
ATTCTCTCATTGCTTTTATACCATCTTGGATCAATTTGTTGAATTACAGC
CAAATTATATTGACTCTGGATGTTCGTCACTTCTTTTCTCCACTTATTTA
TATTTATGAATTGTTCTTTTATTTCTTAAGGTCAATCTCAATCGCAATTC
AATTTTGCATCTTCGTTCACTGAGAAAAGTCAGGATAACACCGACAAGGA
GAAAGAGATCGGAAGTGAAACTAAATCAAACGATGACAACGCCACTGATA
ACAGCACCAATACGGATATACTGAAGAGTAGTGATAATACAAAcaatact
tttgaaaataaagaaatcataACTACTGATGAAAAGGAGGAGATATCTCT
GGACAAAGATCAAGTAGCGGGggaagaaaataatgaaatgaataAATCAG
ACAGTGTTGAAAGCTCAGTAGATCTAAATGATAAGAAACTTGGAGATGAT
AAAACTAAAGAGAATACAGATAATAGAGATAATGATAAAGAAAAAGCTGT
TAATGACGGAGATAATAGTTTTCAACCTGATGGAGATAACCAAGAAGACA
ATGACGGAGATAATGATGTGGGACATGATGGAGATAATAACGAAGATGAT
GGAGATAACCAAGAAGAAAATGACGGAGATAATGAAGAGGGACATGATGG
AGATAATAACGAAGATGATGGAGATAACCAAGAAGAAAATGACAGAGATA
ATGAAGAGGGGGACGGGTCACATTATGGAGAAGATGAGGAGgattatgaa
aaagaaaatgaagagttGAAAGAATGGAATCTACACCTTCAGGAATCACA
AAGGTATGTTAATGTTAATTTATTGGAAATGTTCTCCCTTAGAGTGATTC
AGATTTTAGAAGTTTTAACTCTTCCATCTGCAGACGGAAAACCGCGAAAT
TGAAAATTCTTGTGATTCCGTTTtaataacaaactatataaagaaGAGCT
TTCGCAAAGTTAGAgtcaaatttcaagaaattccGTCCGGATTCAACAAA
GCTGGTTAAAACACTATATTGATTATTGTACAATGTTCTAGTCACTTCAT
GACTAATCCAACGAGTatctttttttatgaaattaaaaGAAAGTCCTTTT
ATGGAAGCTGAGAGACAGACAGTCAACCCTAACATGAATCCCTCTGACTT
TTTTTTTCAGCAACACCAAGAAAAAATGGAAGAAGAAAGCTTTCTATGAA
GATGAAGCTGAGTTATCCGGAAGTGACGTCGGATCAGATGACGAGGATCT
GGGCAGTGAATATGATGAATACGAAGTAGACTCTGATATTGAGAATCTCC
CCGATGATGAAAAACTGAAGAAACAGTTGCATAAAATTCACCAGTAAGTA
ACGTTATTTTATATCGTCAATAAAATCTTGTGATTTGTGTGATCTTTATT
TATTGATCAATACTTCGGCTTTCAAATGACCAGCTAAAGGTGCATGCATG
AAACTATACTTCAGCTGCTTATCCCAAGAATTTCTCATCATAAAGCTCGA
GTTACACGGCCTGTTGTATCCCACCCATCGGCATCTGACTGGCAAAATAT
TTCTAACAAGTAGAATCTGGTAAATGGGTTCATTTTATTTAGGATATCAC
AGCTTGTTTGGGAAAAttcgaattcaaaatttcaCTTAAAGATCTGACTA
ATGTCCCACATGGGATTTTGgattattgggctcttccagaaaatgttcgt
acaccccgcgtggaggatatattgtctgggggtagcgaaaaatttgaaaa
atcgaaatttgccTTGTCTAAGGGGTAAATTTGCACTATCtaaatataaa
tataatatcaaaagtcactttgtctgggggtaaatcactgaaaatggTCA
TATCCTCCATAcccatatacaatttttttctggaagagcccattgttaAT
AATCAACGGTTGATTAtggattaaaattttcttatcatATAGAATAGTTT
CTTGCTTAACGTATTTTGAACAAGTTATTATAAAATTGCATCAATCCAAA
TTTTTAGGAAGAAAATGAATGATAAAGACAAACACGAAATGCGCTTGTTG
CAAGAGCTCTACCTCGAAGATGAATTCGGTGGTGGCGAGAAACGAAAACG
TAACTTTCGTTGGCGAAATGTTGACGACAATTTTAACGACAATAATCGTT
TGAATAAGGAAGTCGACGAAGCTGATAATTATTCGGAATTGAAAGAACGA
AATCAAGAAATGGTGGAACGGaataaatttcttttggaaGTCGAAGAGGT
AGAATTTATTGCTTACGttcttttatttgataattAAAGGACCTCATTGA
ACGTATCTTCTTatatttgcttacacagcatttttaaacaaaaaactacT
TTCTCAACTTTCGGCACCGCGTGAGTAGAAATTTAAAGTCGTTTTTGTTA
AGTAAACATTGATTCAATCCTTTAATTTTGTTAAAAGATGGTTCGAATGA
ACTACAACGAAATAATCTCCAATGCCCTTCAATTTTCACTTTGTGCTTAT
GAAGCCTAAtaaatttttatccttttttttccaggagcagAAAAATAAAG
AGATAGAAATTGACGAAAACAGTCAAATGATATTGGACAAAATCCAAGCT
TCTGGTACGTTTTTATTTAGTGTTTTGCTGGTACTTTTCCATGAATTCTT
TTcatcttggatttttttagTGCAGTAAACATTGATCAAGTTTAGTTCTA
AATCAGACTTATATTAAGGATTTATAGGTTTTTGAAGACTTCCCTTTAAT
TAGAATGGAATTTTCTGACCTTTAGACTAAATATGTTTCCTTTATAATTT
TCAGGCGAAAAACATGTTTCTTCAAGTCAGCCAATTCAAGTTGGTGAAGT
CAGTCAACGTGTTCCACTTAGAAGATCTGTAAGTGCTTTATCAAACATGT
CGTCCTTCAGGTTCTGTCCCTCttaatttttaggaaaatttccaTGTACT
CTGGCTTCAAAGACCTTGCGCCAAAAATTGCCTAAAAccatctttttcta
attttactgAAAGGCATTGAAATAAGTTGTATGTTATAAAGGTCATTACC
CAGAAGAAGTTGTCATCCCACCCTGAATGATCTGCAAATTCCTCCTCCCC
TAAACCCATGTGCTACCCGAGCTCTATAAATATTATTCCCTAAACTTAGG
CCATACTTAAAAACTAAAGTTTACTAATTCTGAATTCACAATGGCTTCCT
TTTTAGGGCTcgtttcttcaaaataaaaaatcacaaaaatttcaaaagaa
cttGTCGTTACCAAATATGCCCAAGTCAATCGGCAAGAAAGCAAATTCGT
TTGTTTTCCAAGCTTTAGAAGAatcaaagaaaacgaaaaaggTACGTtcg
aaatatatatatatatttttatcgttcgttcgttcgttcgttcgttcgtt
cgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcg
ttcgttcgttttgtttcataaattatttctaagatcaatttttaattttt
gttaatCTTTTTCCTAGAATTCGACATCGGACGATAAAATGGCACCACCT
CGCAAACGACAGAAAAGCAACAATGATAACCAAAAAGCACCGAGACTAAC
GGCTAAAAGTATTTTTGCTCTTCTATAGCCCTCCACAATGATGATTTTTT
ATACGATTTTGATGTACatattaataataatttttgagAATCGCTAGTTT
AAAATTTGGTAGGAAGCTTATGtttcatgttttatttttattctaaaCCA
CATCCAACCACTCTTTCGGTTTTGTTGTACATATAATTACAAATGGGAAT
CTTCTTCTATGATTTTCTccctaccttaagggaactcaTTTTCatggtcg
aaaaaaaaattcaaaaaatcgcatttcgcgggaattaattttcgtggTTT
TCCCTATTTTGGACACATCTCTTTAATTTTCCTAGATATGGTAAAATGGC
CAAATTTGTGATTCGAGGGTTCTACCCTTAAGGTAGTTCGAGATATAGTT
AATAAAGTGTCATCTCCCTTGGCAAAATCCCTTCGCTTTATAACCTGATT
GTACCCTATAAAACTTGACCaaatttcttgttgtttttttgtaaatataa
tCTATataaatttagttttttgaaGTTATTTTAGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000842XLOC_000842Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001618-exon-sc0000011-1491911889:943350..944583TCONS_00001618-exon-sc0000011-1491911889:943350..944583Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1510915933:943350..944583TCONS_00001618-exon-sc0000011-1510915933:943350..944583Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1575043694:943350..944583TCONS_00001618-exon-sc0000011-1575043694:943350..944583Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1491911889:944956..945019TCONS_00001618-exon-sc0000011-1491911889:944956..945019Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1510915933:944956..945019TCONS_00001618-exon-sc0000011-1510915933:944956..945019Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1575043694:944956..945019TCONS_00001618-exon-sc0000011-1575043694:944956..945019Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1491911889:946133..946241TCONS_00001618-exon-sc0000011-1491911889:946133..946241Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1510915933:946133..946241TCONS_00001618-exon-sc0000011-1510915933:946133..946241Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1575043694:946133..946241TCONS_00001618-exon-sc0000011-1575043694:946133..946241Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1491911889:946501..946684TCONS_00001618-exon-sc0000011-1491911889:946501..946684Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1510915933:946501..946684TCONS_00001618-exon-sc0000011-1510915933:946501..946684Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1575043694:946501..946684TCONS_00001618-exon-sc0000011-1575043694:946501..946684Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1491911889:947072..947156TCONS_00001618-exon-sc0000011-1491911889:947072..947156Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1510915933:947072..947156TCONS_00001618-exon-sc0000011-1510915933:947072..947156Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1575043694:947072..947156TCONS_00001618-exon-sc0000011-1575043694:947072..947156Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1491911889:947279..947458TCONS_00001618-exon-sc0000011-1491911889:947279..947458Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1510915933:947279..947458TCONS_00001618-exon-sc0000011-1510915933:947279..947458Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1575043694:947279..947458TCONS_00001618-exon-sc0000011-1575043694:947279..947458Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1491911889:947919..948172TCONS_00001618-exon-sc0000011-1491911889:947919..948172Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1510915933:947919..948172TCONS_00001618-exon-sc0000011-1510915933:947919..948172Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1575043694:947919..948172TCONS_00001618-exon-sc0000011-1575043694:947919..948172Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1491911889:948562..948597TCONS_00001618-exon-sc0000011-1491911889:948562..948597Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1510915933:948562..948597TCONS_00001618-exon-sc0000011-1510915933:948562..948597Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1575043694:948562..948597TCONS_00001618-exon-sc0000011-1575043694:948562..948597Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1491911889:949260..949396TCONS_00001618-exon-sc0000011-1491911889:949260..949396Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1510915933:949260..949396TCONS_00001618-exon-sc0000011-1510915933:949260..949396Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1575043694:949260..949396TCONS_00001618-exon-sc0000011-1575043694:949260..949396Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1491911889:950363..950670TCONS_00001618-exon-sc0000011-1491911889:950363..950670Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1510915933:950363..950670TCONS_00001618-exon-sc0000011-1510915933:950363..950670Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1575043694:950363..950670TCONS_00001618-exon-sc0000011-1575043694:950363..950670Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1491911889:950880..951552TCONS_00001618-exon-sc0000011-1491911889:950880..951552Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1510915933:950880..951552TCONS_00001618-exon-sc0000011-1510915933:950880..951552Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1575043694:950880..951552TCONS_00001618-exon-sc0000011-1575043694:950880..951552Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1491911889:951910..952092TCONS_00001618-exon-sc0000011-1491911889:951910..952092Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1510915933:951910..952092TCONS_00001618-exon-sc0000011-1510915933:951910..952092Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1575043694:951910..952092TCONS_00001618-exon-sc0000011-1575043694:951910..952092Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1491911889:952757..952997TCONS_00001618-exon-sc0000011-1491911889:952757..952997Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1510915933:952757..952997TCONS_00001618-exon-sc0000011-1510915933:952757..952997Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1575043694:952757..952997TCONS_00001618-exon-sc0000011-1575043694:952757..952997Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1491911889:953284..953353TCONS_00001618-exon-sc0000011-1491911889:953284..953353Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1510915933:953284..953353TCONS_00001618-exon-sc0000011-1510915933:953284..953353Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1575043694:953284..953353TCONS_00001618-exon-sc0000011-1575043694:953284..953353Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1491911889:953554..953627TCONS_00001618-exon-sc0000011-1491911889:953554..953627Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1510915933:953554..953627TCONS_00001618-exon-sc0000011-1510915933:953554..953627Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1575043694:953554..953627TCONS_00001618-exon-sc0000011-1575043694:953554..953627Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1491911889:953956..954090TCONS_00001618-exon-sc0000011-1491911889:953956..954090Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1510915933:953956..954090TCONS_00001618-exon-sc0000011-1510915933:953956..954090Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1575043694:953956..954090TCONS_00001618-exon-sc0000011-1575043694:953956..954090Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1491911889:954267..954885TCONS_00001618-exon-sc0000011-1491911889:954267..954885Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1510915933:954267..954885TCONS_00001618-exon-sc0000011-1510915933:954267..954885Clytia hemisphaericaexon
TCONS_00001618-exon-sc0000011-1575043694:954267..954885TCONS_00001618-exon-sc0000011-1575043694:954267..954885Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:943350..954885 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.36818	1.29456	3.8958	5.38703	7.56292	6.55375	7.454	7.19031	4.06381	5.34476	3.73299	2.49	1.92797	1.87123	1.99224	1.93986	3.89478	3.40834	0.5904	0.994526	1.17876	1.59072	1.19596	1.41208	4.78499	5.33487	0.650113	0.317174	0.962261	1.13358
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001618 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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