TCONS_00001659 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001659
Unique NameTCONS_00001659
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1589

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001659 ID=TCONS_00001659|Name=TCONS_00001659|organism=Clytia hemisphaerica|type=transcript|length=1589bp
GTTATGCTGTCAAATTGTTagaagaaattttcacaagaTGCTTATGAAGT
GTTATACAGTTCATGTTGATTGAGTGTTCAAAGAAGTTCTGAAAGATGAC
CTTGATGACTTTTGATGCCGATGACGTTGAAGCTATCAATGTTGGTCAAG
ATAAACATACCAGTTTCCATGACGATAATTGAGAAGAATGATCCTTCACG
CCACTACACCACCGCCCCCACCACCTGAAgTTCCAGTCCCTGCGATTGTA
TTTCTGTGCGTATTATGTGGCTGTATTATCATACTATGCATCGTTTATCA
ACTCCTAAAACGTGATATGTGCTGTAACTTCGAAGCGGGTCTTGGAGAAA
TCGAGAAAGCCACAAAGAATGGATACACAGAGCTCACCGAGCATTTTTAC
GACTTTGATGAAACCGAAGGCCCGACTACGGATGATGACCCTCAGAGTCG
GAAATCAAGCCGTCGTAGTAGCCGACGTAGTAGTTACGATTTGACGGCGA
CAAGTCAATCAGGGGGTGAGATGGGAGTCGATTCTTCATCGATATATGGC
GGAGAATCGATTGATATTCGAATTAGTGGACCCGAAGATGAAGCCCAGAG
ACATGCTGGCAAAATTCTATTCGAATTCAATTATACCCCTGAAACACAAA
AGTTGTCTGTGACGGTTATTAAGGCTGCCGACGTCCCGTCTAAAGCACGT
GGAGGATCGTCCGCCATTCAAGTACGGTTGGTACTTCTACCGACTAAAGG
ACAACGGTTCAAAACAAAAGTTCGACCGGCTTCTAACCCGGTTTTTAATG
AGACATTTACATTTATGTATGTTGATCAGATAGCCATCAGTCAATTCCAA
ATTCGAATTCGTATTTACGGTCAGGAGCGTTATAACCAAGGACGATTGAT
CGGTGAGCTGATACAACCACTGAAAGAATTGAATTTATTTAATCCAGCTA
CGGAAGAAAATCAAGTATGGAAAACGTTAGCACCCAGAGCTCTAACGAGC
GCTGATTCCATGTACGATTTATCGGATACTACAAGTGTCGGTTCACCTGG
TTTTGGTTCCCCGATTTTGGGTGGTTCCCAATCCTCATTGACTGGACATT
CAAGTGCACCAGAGCTTCTAATTTCTCTGTGTTATGCATCTTTGACGGGC
CGTTTGACAGTTGAGGTGCTGAAAGCAAGTAATCTCCGACATTTACAACT
ACAAAGGGCACCAGATTCGTACGTCAAGATTGAGGTATTATCGGCACGTG
GCAAGCGCGTTGCAAAAAGTAAAACTACCATCCGACGATCTATGACAGAT
CCCGAATTTAACGAATCGTTCGTCTTTCAAATGTCAGAGTCGGATTTGCA
GGAAGTGACGTTAGTCTTTTCCGTCATTTGTATTTCGAAGACACGAAAGA
AGAAAGATGTTTTGGGTTGGTTTACTATGGGTAAAGAAGCCAATAGTTTG
GATGAGATCGACCATTGGGAAGAAATGATCGCCCACAAAGAACAGAAATC
AACGCACTATCATGTTTTACTACAAGCTTGAATCGATTGATTCAACATAA
TTTATTCGGTAGAAAATAATATTGTTGTTTTCTTCATGG
Run BLAST on NCBI

transcript from alignment at sc0000011:365223..373391-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001659 ID=TCONS_00001659|Name=TCONS_00001659|organism=Clytia hemisphaerica|type=transcript|length=8169bp|location=Sequence derived from alignment at sc0000011:365223..373391- (Clytia hemisphaerica)
GTTATGCTGTCAAATTGTTAGAAGAAATTTTCACAAGATGCTTATGAAGT
GTTGTAAGCTCCCTTTTTCATTTTTAAAGTTTATGAAACACTCTTTTTTT
TAATCATAGACTTTATATAATACTGGAAAATCTACTGCAGATTCGCACGG
AAATTGTATCAGTCCTTGAATCTAAAATCTATCTACTTTGACGTCAAGGG
TCATTTTACGTCATTTTGCATTGATGCTCACCTAATTCAATGGTATTCCT
CTTTTTAGATACAGTTCATGTTGATTGAGTGTTCAAAGAAGTTCTGAAAG
ATGACCTTGATGACTTTTGATGCCGATGACGTTGAAGGTTTGCCTTTAAA
ATGTTTAGTTATCCTGCTTCTAAAGTTACCAGTATCAATACTGGTAAATG
TGTAAACTAAGAATTACAATACAGCGTACTTTAGATGAGAAACTCATCAA
TCCCTAAGTGAGGATTTAGAGTAAGGAACTCTGAAGTTAGAATTGCCATA
AAGGTAGAAAAGTGATCTTATAAAAGGTTGTCGAGAACTATAAATTCTAC
TGAGGGAGGAGTGTTTTTGAAATGTCCTTCGTCCAGTGGAATTCCAACAA
CTTGATATCGTCTCTTCTTTCCCACTGTTTATTGACAATAAGTGAAAAAG
AAAAAGAAAAGTGATGAAAAAAAAGTAAAAGGGAATGAGTCTAATCATCA
CCCAACCATCCAACCAACAGAAAAGGAATGTGATTAAAAATAAATAACTT
TATGAAAGCATAAGACAATAGAAACAATAGGGATTGAAAGAAAAAAGGGG
GTCTTTTGAAATAAGAGAATTATTTTAAGTATATTTTCTTGCTGTTTTTC
TTTCATCCTCTTTTCTTTTAGATTTTATTTTCTTCATTTTTTTTCACTTT
AAAACTCACTTTATCTTGACAGTTGTGTTCGAAGGATCGACTAGAAGGAA
AATTTTTAGACTTTTCATATTTTTGACTGAATTGCTATGGTCAAAATTGA
CTCAGTAGTGGTAGATTATTGTTATTTATGATTTCGTTCACAGCTATCAA
TGTTGGTCAAGATAAACATACCAGTTTCCATGACGATAATTGAGAAGAAT
GATCCTTCACGCCACTACACCACCGCCCCCACCACCTGAAGGTATTTCTT
TTTGATTTGCTCATTGCTCAGTTCACGATTTATTAAAATGCTCATACCCG
GATTCTCATATTGTTCAATTAAGGTCAATGTTGTCTCTGCGCTACTGGAG
GATTGGGTTCCAGTGAACCAAGGTTGAATGACGTCAAAATGTTCATACAG
TTACTCTTAGGTTCCAAATAAATGACCCCCCCGCTTGTTAATTGTTCGAA
AATCTTCCAACCCCTAGACCTTATTAGGACCCCCTGAAGCCCCCCTGTTA
ATTAATTTCTGAGCATATTCTCAGTTTTCAAAGAGAAGGTCCCTCATTTT
GCTCTAAATAGCCTGATTTTAGCCTAGATTTAAAACATTTTTGGTTTTTC
AGAAGTACAAATTCCAACCTCCCAGCAATTAGGTCCCCCTCATTTATTAA
AATTTTGAAAATTTTCCAACCCAACAGGGGGGACTTTATTCGAACCCCCT
CCTGTTTATTTTGAACCTAATAGTAACTCGCTAGTTCGAATACCTACTTT
TTGCACAGGGGGCTGATATGTGTATTCAAGACAGTAACATGACCAGCTAG
AACTTTTTGGTTTAAAATTATATTCTTTAAATTTGGGATAAATATGACTT
GCAATCCTTTGTTCACTTTCAAAGCTCCAGTTCTTGTTAGATGTGGAACA
TCTTGAGAAATAATTGAAATTGATATCAGAATTCTTATGCATATTATTTA
TATCGGCCAGGGATTAAGTCGAAGAAATACTCACAGGCCAGCAATGGAAT
AGCATATCGAAAGTGCTAGATGTGCCATTTTCTGAATCATCATTAATTTA
GGCTCCAAATGAAATGGAAAAGACTTAGGTGCATGACCTATCTTTATCTT
TATTTATTTATAAGTTATCGCTGACTTTTCCCATTTTTCCTTAAAATTAC
TCTATGAAAAGACTTTCATTTTTGACAGCAAGGACGACAAAGTGGTAATG
GTTAACAGTGTAAGAGCGCAAAGAGTAATTTTTTTTAAATTTTAAACGGT
TACAGATGCTTAAAACTCATTCGAGGCACTATATAGACTATATAGCTGCC
ATAAAGACGTCATTTTAGAAGAATCAAAGATGATCGCCGTAATTAACGAA
CTTGATCACTCTAAAAAGAGTGCAAAATGTTATTCAAACCTACTTTAATG
AGATAAATTTTCGCGGGGATTAAATTTTGCGGTTGAGCTCATCGAGTTCA
TATATTGCACTATTGGGAGTTAATACTTTCACGGCTTTGTGCTTTTTTAC
GCCAAATTATGCAAATTGGTTATCGTATATACGCATTATTGGCGCTTCTT
TGATGTCAATACACATTTTAGAAGTAGTTATTTGACATTTTTCGAGTTTT
TCTCAGAAAATATTTCACGGATGAGGCCTTTCCAAACTTCCATTGGGACT
TAATTTCGCGGATGACACCCAACCTGTGAAATTTAATCCCCGCGAAAATT
TCTCCTGGCCACTTTATTTAAGTTATAAACCGAGTTATTTTTAACCGGTC
CGTCAGAAAAGGGAGAAGGTTAAGTTAAAGTGTACAGGTTACTTCAATTA
TTTAATAAAATTTTAAAAAATACAAAAAGTTCATTCAATATTTTGAAAAG
TTAGAAGCCATCTGTTTTTCATGGAAACTTTTTATAACTAATAAAGTGAT
CAAACTGTGGCTCAAATATCATGAACATTCGAAGATAATAAAAGTCACAA
CACGCTCAGCGAGATAGCTCTAATTTATGAATGATTAAAAGCATGTTATG
TACTCTTTCATTAAGCTTTTAAACACCTTTACCATTTGTTTAAACGTATA
AACCCGTCTTGCTACTTAATAAAGAGGCGTCTGATGAGCTTTTCAAGTTT
CAATATACGAACCTGTCTCAACGGCTGTGGGAATTCCCCCCGTGGAAATT
TAATTCGGGAATAGATAAAGAGATTTATTCAAACGGGAAGCAAAACACGC
TGCTCTAAATAATGATGCAAATTCAGGTGACGGAAAACTTTCACAATATT
AAATTTTAAATTCATGTTAGAAATTCTGTATTTTCTTAATCACTAGGGGT
TTTTTCAGTCCTAATCTAGAGTTTAATATGCCTCAGTAGGTGTGGATCCC
ACTTTGGTCCTTCTAGCAGGTTTTCAATCGGGTGATTCCCTTTTTTTTAT
CCAAGTTATTGATTATTTTTTATCTTGAAGAGCTATGACCATGAATGAGT
TGTTGTTCTCCATCATAAAACAAACTTCCAGGCTACCTCTCCTCTCCAAA
AGGGTTAACTCAATAAACTTTCTCATTAATTTCAACATGAAGATGCAAAT
TCAAAATGACTTTTTGTTTACCGTGAACGTTGGCATATAAAAGTCTTGAG
TACAAAAAGATTAAGTCTAAAACAACGATCAAGAACTGTTTTTTAAAAAC
TTGAGGTTTGGGTCTGCTAAAACTTCAGCAAATTTCAGAAATCACTGAGG
GAAATACTTGCAATACTGGTTTTGAAATTTTAAATGAAATTTACATTTCG
ATAAAAAGAAAGAAGAGCCGCGGCTAAGCTGAATTCATTAGCACTTCTAA
AAGAAGTGAGTAACGCCAACTATTGCTAATTCGAAATTAATTTTGCATAT
ATCTGAAATCTCTTATCAGCGTCCAAACCCCACCTTTTTTTCAATCTGAA
AACCTTCAACCCCTCCCAAAATCCAGGGAATCCAGGGCAGGTGCCCACTA
TTTTGTTGCAATGAAACAAATTTGAATTCCGTTTTTTTCTAAATTTTCAA
CGCAATAGAGAAACATTTAACGATTACTAAGGCGAAGTTCCGTTCAAATT
TTCTGATTCTTTGGCTTCTTTGTATCACAGCTTTTAGTGGATTTTAAACT
AGAAGAGGCGTGATTGGGACCTTTTTCTTGCGTGATGGCGTGATTAGAGA
TTTTTTTGGCGTGATGGCGTGATCAAGATTTTGGCGTGATCAAGATTTTG
GCGTGATGCGTGATAGGGCAAAAATTTGAGGCGTGATGCGTGATATGGGC
TATTTTTCGCTATTTTTTGCGTGATGACAAATTTTAGCGATTTTCGTGAT
GCGTGATGGAGAAAATTTTTTTGCGTGATGGCGTGATTAGAGATTTTTTT
GGCGTGATGGCGTGATCAAGCTTTTGGCGTGATCAAGATTTTGGCGTGAT
GCGTGATAGGGCAAAAATTTGAGGCGTGATGCGTGATATGGGCTATTTTT
CGCTATTTTTTGCGTGATGACAAATTTTAGCGATTTTCGTGATGCGGGAT
GGAGAAAATTTTTTTGCGTAATGGCGTGATTAGGGGTGCCGCGGGGGGGG
GGGGGGCTCTAGAAGAGGTGAAGAAATAGGCTACATTTTGCTGGGTTTGA
TTTTTTGATAGAGTAAAAAACACCGGGAGGAGGTGGATTTAATCAACCGG
GGTTAGCAAAAATTTAACAAGGAATGTTGATATTGCACACTCACGGACAA
AAGGTTGTAGACTTTTCAAAAATGCATGAAAATTTTCAAGCAAGCAAGCT
CTGAAAACCAATTTTTACCAGAGCCAATGTTTCAGTCTTTGAAAGTCCAA
AAATCACAAGAACTACTAGCAAGCTTATAGGTGTGTTTTCTATTCCAAAA
AGATTGGACCAAAACTGTTTGTTTTCTTCTATCTTCAGTGATCTTTAGAT
TAAAGTTTGTGATAATTAAGTTGGAGTCTCTGTGAGAACTTTAAACCAGA
TTTACTCTATCATTTCTATGAAATGTGTAGACTGGAAAGTCTCTATCATT
TTCCACGCATGCGTAAAAACTAATGAATCTTTCGTTCTATATCTGGAGTA
AATATTAAAAAGAAGGAAAAAAATATTTCAGGAAAAAATTATTATTTTAG
CGATAGATACAACAACAAAAATTTAAGGTTGTAAATTCTTTTGTTTTTTT
GTGCGTAAGGCAGATGTTTTCTATATATTTTCTCATTATATTTATAATTT
ATCAAAATATAAAAGTGAAGGTTGAAGAAGGAAAAGAGAGAGAAGAAGAG
CGAAAATTATCAAAATATGGGGTAGAGAACAAACGAAAAAATGGAGCAAA
ATATAAAGGCCTTTTAGGGTTTTTTCATATTATTTTTCACTCTCTATCCT
TTTACTCCCGTTCATTTTCTTCTTCTTTTTCTAATCAATTTTTCCTTTCT
TTTTTTCTCATTGCTACACCAGTGAAAGGGATTTGGTATACTAGTTTTTT
GCTGGACTGGAGAGTTGATGTGCCCGCAGAAGAAAAAATTTTTTCAGCGA
AAAAAAAGGGAAAATGTAGCCCCTTGTTTAACTACGGTGAAAGATTTTAG
CAGAACATTTCTGAGCTCTGCTTACTCGATATTGGAACCTGAAAAACTTA
TTATGTAATGCCTGGTCACTAATATACTTTGGTTGATTTGTATTTTGCTG
ACTCGGCATTTTACTTTTCTTGACAGTATGGAATGTAAGTTGAAATTGTG
CTCTAAACTTTCTTTTCCGCCTTGAAGTTTTTATCCTTATATAATGATGT
GGGTACAATGCTTCCCGTTCGAGTTTAACACCTTTTGTCTTTCTTTTCTA
GTTCCAGTCCCTGCGATTGTATTTCTGTGCGTATTATGTGGCTGTATTAT
CATACTATGCATCGTTTATCAACTCCTAAAACGTGATATGTGCTGTAACT
TCGAAGCGGGTCTTGGAGAAATCGAGAAAGCCACAAAGAATGGATACACA
GAGCTCACCGAGCATTTTTACGACTTTGATGAAACCGAAGGCCCGACTAC
GGATGATGACCCTCAGAGTCGGAAATCAAGCCGTCGTAGTAGCCGACGTA
GTAGTTACGATTTGACGGCGACAAGTCAATCAGGGGGTGAGATGGGAGTC
GATTCTTCATCGATATATGGCGGAGAATCGATTGATATTCGAATTAGTGG
ACCCGAAGATGAAGCCCAGAGACATGCTGGCAAAATTCTATTCGAATTCA
ATTATACCCCTGAAACACAAAAGTTGTCTGTGACGGTTATTAAGGCTGCC
GACGTCCCGTCTAAAGCACGTGGAGGATCGTCCGCCATTCAAGTACGGTT
GGTACTTCTACCGACTAAAGGACAACGGTTCAAAACAAAAGTTCGACCGG
CTTCTAACCCGGTTTTTAATGAGACATTTACATTTATGTATGTTGATCAG
ATAGCCATCAGTCAATTCCAAATTCGAATTCGTATTTACGGTCAGGAGCG
TTATAACCAAGGACGATTGATCGGTGAGCTGATACAACCACTGAAAGAAT
TGAATTTATTTAATCCAGCTACGGAAGAAAATCAAGTATGGAAAACGTTA
GCACCCAGAGCTCTAACGGTGAGTATTCAAACTTCATCTAGTAAGAGGGC
GTTCTTTAGGATCTTACTTATAATTGTCTAATGTAAAATATTTTAAAAAC
ACTACTCTTTAATTTTTCGTAGAAGGGCATAGTGGTCGTAGTACTTGAGA
TATTGGGGTGAATTTGTGGTTTCATATAGTTTATTTTCGCTTTTTTGACA
TAAAGTAATAATAGGAGTTGTTAAATTGACATTATTTTGAACCCGTACAA
TTTGGTACAAGAGTATTATGATGGCTTTTTACACGATTTTGCATGATTGA
AGAATCATTTTCAGATTGTGTGTTTGATGTATAATATACTTTTCAGAGCG
CTGATTCCATGTACGATTTATCGGATACTACAAGTGTCGGTTCACCTGGT
TTTGGTTCCCCGATTTTGGGTGGTTCCCAATCCTCATTGACTGGACATTC
AAGTGCACCAGAGCTTCTAATTTCTCTGTGTTATGCATCTTTGACGGGCC
GTTTGACAGTTGAGGTGCTGAAAGCAAGTAATCTCCGACATTTACAACTA
CAAAGGGCACCAGGTGTGTATTATGTTTTATTCTTTTATTTTATTTGTTC
TGACAATCCTCAAAATTCTACGCTTAGAATATTTTGACTCTGGATGGCTG
TGAATTTTCAGATGGTCGATAAAACAATTCTAGTTTATTAAAAGATAAGC
TAAAATCTATAATATCGTGATCGTATCAACTAATATCTTAACAAATATAA
CTGGAACGTTTGAAAAAGTTTACATAAAATCGTATGTTTTAGAATTCATA
ATATTCACGACATAATGTTTCACGGATACCCCCAAAACAACCCGGGTGTC
TGTCACACTAGTTTCATTTTTAAAAATTCAAAACTAGTGTCAAACACTCG
GGCTTTTTGGGGGGCATCCGTATAAAAGATTACTTTATGACCAGTTTGCA
AAGTATGGCAAGGCTGCACTCGAGGAAAAATTCGGAAATACCAAGTTCTG
CACTGGAAGAACGCACCTGATAAATTTTGGTCCGGACAGGGTGCACCTAG
ATACCTCGGAAATTCGTCCAAAAAGGCAAAAATTGCTAAAATTAGCTGCA
CTTGAAGAAAAAATAGCTGAACTTTGCACTTGAGGTTAAAAAAACGTTTG
AATTTGCACCTGCACTCAACTTTTTCCGAGTTGTGCACTCGAGATCTCGA
GCAAACTTGTCACACTCTGCAAATTGGCTTTATGAATACCACGAGTTCGG
TCGAGTGACTCGCAAAATACATTATTGTAAAAACCCACAATACTCCCACT
AACCGGTTTGGACTCTTTCCTAACCCATCGTCATAAAAATTTAGATTCGT
ACGTCAAGATTGAGGTATTATCGGCACGTGGCAAGCGCGTTGCAAAAAGT
AAAACTACCATCCGACGATCTATGACAGATCCCGAATTTAACGAATCGTT
CGTCTTTCAAATGTCAGAGTCGGATTTGCAGGAAGTGACGTTAGTCTTTT
CCGTCATTTGTATTTCGAAGACACGAAAGAAGAAAGATGTTTTGGGTTGG
TTTACTATGGGTAAAGAAGCCAATAGTTTGGATGAGATCGACCATTGGGA
AGAAATGATCGCCCACAAAGAACAGAAATCAACGCACTATCATGTTTTAC
TACAAGCTTGAATCGATTGATTCAACATAATTTATTCGGTAGAAAATAAT
ATTGTTGTTTTCTTCATGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000865XLOC_000865Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001659-exon-sc0000011-1575043694:373339..373391TCONS_00001659-exon-sc0000011-1575043694:373339..373391Clytia hemisphaericaexon
TCONS_00001659-exon-sc0000011-1575043694:373055..373133TCONS_00001659-exon-sc0000011-1575043694:373055..373133Clytia hemisphaericaexon
TCONS_00001659-exon-sc0000011-1575043694:372251..372348TCONS_00001659-exon-sc0000011-1575043694:372251..372348Clytia hemisphaericaexon
TCONS_00001659-exon-sc0000011-1575043694:366924..367690TCONS_00001659-exon-sc0000011-1575043694:366924..367690Clytia hemisphaericaexon
TCONS_00001659-exon-sc0000011-1575043694:366379..366595TCONS_00001659-exon-sc0000011-1575043694:366379..366595Clytia hemisphaericaexon
TCONS_00001659-exon-sc0000011-1575043694:365223..365597TCONS_00001659-exon-sc0000011-1575043694:365223..365597Clytia hemisphaericaexon
TCONS_00001659-exon-sc0000011-1510915933:373339..373391TCONS_00001659-exon-sc0000011-1510915933:373339..373391Clytia hemisphaericaexon
TCONS_00001659-exon-sc0000011-1510915933:373055..373133TCONS_00001659-exon-sc0000011-1510915933:373055..373133Clytia hemisphaericaexon
TCONS_00001659-exon-sc0000011-1510915933:372251..372348TCONS_00001659-exon-sc0000011-1510915933:372251..372348Clytia hemisphaericaexon
TCONS_00001659-exon-sc0000011-1510915933:366924..367690TCONS_00001659-exon-sc0000011-1510915933:366924..367690Clytia hemisphaericaexon
TCONS_00001659-exon-sc0000011-1510915933:366379..366595TCONS_00001659-exon-sc0000011-1510915933:366379..366595Clytia hemisphaericaexon
TCONS_00001659-exon-sc0000011-1510915933:365223..365597TCONS_00001659-exon-sc0000011-1510915933:365223..365597Clytia hemisphaericaexon
TCONS_00001659-exon-sc0000011-1491911889:373339..373391TCONS_00001659-exon-sc0000011-1491911889:373339..373391Clytia hemisphaericaexon
TCONS_00001659-exon-sc0000011-1491911889:373055..373133TCONS_00001659-exon-sc0000011-1491911889:373055..373133Clytia hemisphaericaexon
TCONS_00001659-exon-sc0000011-1491911889:372251..372348TCONS_00001659-exon-sc0000011-1491911889:372251..372348Clytia hemisphaericaexon
TCONS_00001659-exon-sc0000011-1491911889:366924..367690TCONS_00001659-exon-sc0000011-1491911889:366924..367690Clytia hemisphaericaexon
TCONS_00001659-exon-sc0000011-1491911889:366379..366595TCONS_00001659-exon-sc0000011-1491911889:366379..366595Clytia hemisphaericaexon
TCONS_00001659-exon-sc0000011-1491911889:365223..365597TCONS_00001659-exon-sc0000011-1491911889:365223..365597Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:365223..373391 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.151505	0.325132	0.277962	0.356791	0.817753	0.26569	42.6425	51.6053	16.9693	15.9446	13.5746	13.6667	4.75753	2.77908	0.257754	0.464933	15.6091	9.63144	3.01503	4.96469	11.4751	9.79101	3.57402	3.92543	6.8378	11.0937	3.33564	3.89554	0.170272	0.142975
Blast
[Close]
BLAST of TCONS_00001659 vs. Swiss-Prot (Human)
Match: SYT14 (Synaptotagmin-14 OS=Homo sapiens GN=SYT14 PE=1 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 7.037e-57
Identity = 120/348 (34.48%), Postives = 192/348 (55.17%), Query Frame = 2 
Query:  485 YDLTATSQSGGEMGVDSSSIYGGESIDIRISGPEDEAQRHAGKILFEFNYTPETQKLSVTVIKAADVPSKARGGSSAIQVRLVLLPTKGQRFKTKVRPASNPVFNETFTFMYVDQIAISQFQIRIRIYGQERYNQGRLIGELIQPLKELNLFNPATEENQVWKTLAPRALTSADSMYDLSDTTSVGSPGFGSPILGGSQSSLTGHSSAPELLISLCYASLTGRLTVEVLKASNLRHLQLQRAPDSYVKIEVLSARGKRVAKSKTTIRRSMTDPEFNESFVFQMSESDLQEVTLVFSVICISKTRKKKDVLGWFTMGKEANSLDEIDHWEEMIAHKEQKSTHYHVLLQA 1528
            Y+    S S   +  +  S  G  S   +   PE EA+   G +   F+Y  + QKL VTV    D+P+  R G ++ QV LVLLP K QR KT ++    PVF ETF F +V+   I  + +R R+YG  R  + +++GE I  L +LNL    +    +  +       S  S+ ++S + S  S           QS    H S PE+LI L Y + TGRL+ EV+K S+ ++L   R P++YVK+ +L++ G+ ++K KT+IRR   +P + E+FVFQ++   L +VTL+ SV    ++ K+K+++GW ++G  ++  +E++HW EM   K Q+   +H LL++
Sbjct:  223 YEEDVPSDSTAVLSPEDMSAQGSSSQLPKPFDPEPEAK--YGTLDVTFDYDSQEQKLLVTVTAVTDIPTYNRTGGNSWQVHLVLLPIKKQRAKTSIQRGPCPVFTETFKFNHVESEMIGNYAVRFRLYGVHRMKKEKIVGEKIFYLTKLNLQGKMSLPVILEPSYNHSGCDSQMSVSEMSCSESTSS----------CQS--LEHGSVPEILIGLLYNATTGRLSAEVIKGSHFKNLAANRPPNTYVKLTLLNSMGQEMSKCKTSIRRGQPNPVYKETFVFQVALFQLSDVTLILSVY-NKRSMKRKEMIGWISLGLNSSGEEELNHWTEMKESKGQQVCRWHALLES 555
The following BLAST results are available for this feature:
BLAST of TCONS_00001659 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SYT147.037e-5734.48Synaptotagmin-14 OS=Homo sapiens GN=SYT14 PE=1 SV=... [more]
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