Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001584 ID=TCONS_00001584|Name=TCONS_00001584|organism=Clytia hemisphaerica|type=transcript|length=160bp CTGATTTCGAGTTGATAGCAACGAAATTGTATCCACGTCCTCTTGGTGCG AGATTGGTGGCGAATTGGTTGTTCAAGTTGATTCTGGCAACTCCACATGT TCCTGAAGGGATGCCAGGATCTTCACAGCCTTGTGAAAAGACACGATAAC TGATTCCACC Run BLAST on NCBI transcript from alignment at sc0000011:346422..346636+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001584 ID=TCONS_00001584|Name=TCONS_00001584|organism=Clytia hemisphaerica|type=transcript|length=215bp|location=Sequence derived from alignment at sc0000011:346422..346636+ (Clytia hemisphaerica) CTGATTTCGAGTTGATAGCAACGAAATTGTATCCACGTCCTCTTGGTGCG
AGATTGGTGGCGAATTGGTTGTTCAAGTTGATTCTGGCAACTCCACATGT
CCCTGAAGGGATGCCAGGATCTTCACAGCCTTGTGAAAAGACNAACTCCA
CATGTTCCTGAAGGGATGCCAGGATCTTCACAGCCTTGTGAAAAGACACG
ATAACTGATTCCACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00001584-exon-sc0000011-1491911889:346422..346517 | TCONS_00001584-exon-sc0000011-1491911889:346422..346517 | Clytia hemisphaerica | exon |
TCONS_00001584-exon-sc0000011-1510915933:346422..346517 | TCONS_00001584-exon-sc0000011-1510915933:346422..346517 | Clytia hemisphaerica | exon |
TCONS_00001584-exon-sc0000011-1575043694:346422..346517 | TCONS_00001584-exon-sc0000011-1575043694:346422..346517 | Clytia hemisphaerica | exon |
TCONS_00001584-exon-sc0000011-1491911889:346573..346636 | TCONS_00001584-exon-sc0000011-1491911889:346573..346636 | Clytia hemisphaerica | exon |
TCONS_00001584-exon-sc0000011-1510915933:346573..346636 | TCONS_00001584-exon-sc0000011-1510915933:346573..346636 | Clytia hemisphaerica | exon |
TCONS_00001584-exon-sc0000011-1575043694:346573..346636 | TCONS_00001584-exon-sc0000011-1575043694:346573..346636 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000011 | supercontig | sc0000011:346422..346636 + |
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001584 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 ( blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match Name | E-value | Identity | Description | |
back to top
|