TCONS_00016657 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016657
Unique NameTCONS_00016657
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2503

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016657 ID=TCONS_00016657|Name=TCONS_00016657|organism=Clytia hemisphaerica|type=transcript|length=2503bp
AATCAAGTAAAACAATTGTTTGTCTCAAGAACTATCGCTGAAAAATTTCT
GGCATTTTTGAGAAATGTTTCGTCCTACACCAAAGAAAGGTTTGGAGAAC
TATGTTGGTTTCGCAAACCTCCCCAATCAAGTGTTCAGAAAAAGCGTCAA
AAAGGGATTCCAATTTACATTAATGGTTGTTGGTGAAAGTGGTTTGGGTA
AATCAACGCTGATCAATTCATTATTTCTCACCGATATATACACGAGCACC
GTCTACGAAGATGCTGCTGCCAAATTTGGTAAAACTATGACAGTCAACGC
GTCGACGTTTGAATTAAAAGAAGGAGGCGTTCGTCTACAGCTGACGGTGG
TGGACACGCCAGGTTTCGGTGATAATATTGATAATACTGACTGTTGGAAT
TCGGTGATACAAAATATCGAAGCGAAATTCGAAGATTACTTGAATGCAGA
ATCACGCGTAAACAGGACGACCGTACAGGATACGCGTGTTCATTGTTGTT
TATATTTCATCGCACCTACCGGCCATGGGTTGAAGCCATTGGATGtagaa
tttatgaaaaaattacaTAATAAAGTCAATATCGTTCCAGTCATCGCAAA
AGCAGATACGCTGACAGGAGATGAATGTAATAGGTTCAAACAACAAattt
taaaagaaatcgaAGACCACCAGATCAACATTTACAGATTCCCTCCACTT
AGTGACGATGAGTCCGAAAATGACCTCGCTGCACTAAGGCGTATCCCATT
CGCAGTGGTTGGAAGCAATACAGTATTAGAAGTCGGTGGTAAAAAAATCC
GCGGACGTAAATATCCATGGGGTATCGTCGAAGttGAAAATATCGAACAT
TGTGATTTCATCGCACTGAGGAATTTACTGATCCGAACTCATATGCAAGA
CTTAATTGACGTCACCAATGACGTACATTACGAGAACTTCCGCAGCGAAC
GGTTATCTGTACTTACTGGAGGCGGTAACTCCATCACAAGTGCTGCGCTG
AACATCAATCCCATGGAACAGATCGAACGAGAGCGCGAAGATCAAGAGAA
AAAACTGAAGAAGATGGAACAAGAAATGGAACAAGTCTTCGAAATGAAag
tcaaagaaaagaaaaagaaactcaAAGATTCAGAAGCCGAGTTCAACCGT
AAATTTGACGTCACCATGAAAACATTGGaacaaacgaaaaaagaattagA
AGATAAACGTAGGAAGTTCGAAGAAGAACGCAACCAGTTCGACAACAGCC
AATCAGCACATAACTTGGATAGTAGCAGGTCCAGTAGTAGATCTTCTTTG
CAGAAAGTCGCCgacaaagataaaaagaaaaaagcaaaaggTGGATTTTT
TTAAAGCGAAATTTTGTTGATAATAATCAAAAATCGACAATAGACTTTAC
CTCGACTCGAGTCCATCGCAGCAGACGTtggaaacattttttgaaagaat
ttatATTTTGCATCGTATCCACACATCACTTTTACCAATAAATCACGTGA
TCGGAGCTCGGTAAAATAttatgaaaatgatgacgtcatgttGACTAGAA
AAGGATTATGGGTCATGGGATATTCTTGGAGGCGATGAAAACGGTGCATT
GTGGGACGTTGACTCGCCCACGTTTCATCGGCCAGTTGTTtataatatat
tattttgatgaatccaattttacaatgaaaaattttagtccttttttcag
ttttttttttcgtcttttttttttagtgtACCTCTTACAAATTAGCGGTT
TTTATCTCTGAGTCTTTTGAGGATACTGCTTTTCTCAGGGTGagaataat
ttttcattcaGCTTACATTGTTTTCAATTCTTAACAAAaatgcctcgttt
tgaaattattgccatggtgattaactcccagtggattttattGAAATTAC
TTCCTACTCATAAAAGAATCCATAAAAGAATTCATAAAATTCataaaaga
atcatttaattctcaagggacataatcaccattgtaattgtttgaatacg
aggcaagtgatgttcgtgacgtaatttatgaaaaggtcatCAAGTAGTCC
NtgaggcaagtgatgtttgtgacgtaatttatgaaaaggtcatCAAGTAG
tccattttttatttcatattgtTTCTTTAACTTGTTATATACTAGATTTG
TATAGCGAAATTCTTTGATAGGTAGAAACCAACCAATTTTTGTCATATAT
CTTGTCATTCTCTATAAGGGAGCAATATTAAATTCTATATGTCGGACATG
TCCGTGAATAGGAATTCATATTTCCCCAAAACTAACAAACTTAAGTTATG
AATATTACAATTTTCATTACCAACAATATTTATAAGATGAACTCGCAAAA
TTATTTACCGCGggctttttttttgttattttctatTAGTTATTACCCTC
TGCTTACTACTTtataatgttttaatttttactgTAACTTTCGTTTTGAA
AAACCGTGAACTTTTTACACCATGAAATAAgtttctgttttcttttgatg
CCT
Run BLAST on NCBI

transcript from alignment at sc0000246:285539..301367+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016657 ID=TCONS_00016657|Name=TCONS_00016657|organism=Clytia hemisphaerica|type=transcript|length=15829bp|location=Sequence derived from alignment at sc0000246:285539..301367+ (Clytia hemisphaerica)
AATCAAGTAAAACAATTGTTTGTCTCAAGAACTATCGCTGAAAAATTTCT GGCATTTTTGAGAAATGTTTCGTGTATGTTTTTATGTTGAATTACAATta attcaaaatatattatttcaaaaaaaataatcaattttttataatcttgt ctcttgTTTACGGTCTAGTCCAACTAACTCGTGTCTACAGGGATATTTga ccctgcatatgcgagtgcaTCTAATTCCTCAATATGCACCCAGTCACTAA TCAGAATTTTCAcagtatttttcatattttccatAATTTGTGGAAAAAGC TGACTTGgcagaaaaagtaaaacaaatcaAAGTGAAAACTCAAAGCTCAT TTGTAAACAAAGTCGCTAGTGTTTGAGAGtttttataaatgtggctgatg tttttaatagttttgaaagttttaggAGCTTGTTAAAGAAGTTGATTATG TGATTCTACCTGGGTTACCAAAGTTTTGATTAACCCTTTCAACAAGGTTT CACTCACAGTTTGTGTCATACAAACTGTATTTATTAGACTTTTGACGCCA GACTTTAGACGTTGCGCCAGACTAGTTAGAACACCAGCTAGAAACTTTGC ATGTCGGAGATAAGAAAATTtatatctaaaattttgagtcGGGATAACCA GGTTTTATATAACCCTACAATTCAGAAAAGCCGAAGTCTGAAAAAGCCAT ACTATGAGTTGGTGCAATTTCTGGCGTCCTTTTCTGTCAAAAGGTTTGAA AACTCTGAAAAGATTTCCATAGAAAGTATGTCAAGGAATAAATTCACCGA CCGTTCTACAAAAGGTCTATAGTGTTAGTGTAACCATAGTGCAAAAAGGG GTTTGACCCCCCTTCTTTAAAACGATGCCTCTTGACATCCctcaaccttt aaaaatgcataTCCTCCAAGGGTcttggacaaaaatagctaacaaatata tgtgaaataGCCTCATAGAGAGAAAGAGAAATAAtgaacttctttcttct ttttgattcAGAATAATCAAACAGAAAgcttcctttcatgcagaccaaag TTAATAACAGTGCTTGAAAGTAATCTACAATATGTATCTTAGCCCCCCTT CTTTAAGCAATTGCCACCCCCATTTTTCTTCTACGTGCCTGACtgacttt gttttttttcaaaatctaaaaatgataaaattgaaTTTGCAAAGCAAATG GCGGATGGACTTAATAGGTTTTTTGCAGATATATTTAACTGAACAATTTG AAAAGTCTGAATCTTAGAGCTTATCAACTTAAAATACCACAATGGAAATC ACACAAAAGtcacaataaaaaaatcttctgcttcaaatatttttttagat ctTGACCTTCTGTATatagattttgagaaatttatttttattacacCGAC TGACTGACTGTTATTCCTACCCCAGACAGTAGGTTAGTTAGTAGGTTGTT ACAGTATTCAAAAAGATTcttcaataaaaatattgaaaatttgcaaattG ATTTAATTTATATAGATATTGTTTAGTTAGTATTATAAGCAATTTTTGAA AGGCTTTACAATACTTTTTTGCCTGGGGTAAATTGACTTATGGCTATGTG CAGCGGTTAAGGGTATGCTTTTTAAGatagcagaaatgcactgtaagggt atgaattctgagagccaatttttttcgctACACACACCCTCAGTAAACCC ACTACCCCCCAAGGCTATTTTTACGAAAATTcttgaattgttttgtttag TTCTATCACCTTATTCCAGCTTTTACATTTACAACTTATTGGACTAGACC AAGCAACTGTACTTTCTTATTNTCATAGAGAGAAAGAGAAATAAtgaact tctttcttctttttgattcAGAATAATCAAACAGAAAgcttcctttcatg cagaccaaagttcataacagtgcttgaaaGTAATCTACAATATGTATCTT AGCCCCCCTTCTTTAAGCAATTGCCACCCCCATTTTTCTTCTACGTGCCT GACtgactttgttttttttcaaaatctaaaaatgataaaattgaaTTTGC AAAGCAAATGGCGGATGGACTTAATAGGTTTTTTGCAGATATATTTAACT GAACAATTTGAAAAGTCTGAATCTTAGAGCTTATCAACTTAAAATACCAC AATGGAAATCACACAAAAGtcacaataaaaaaatcttctgcttcaaatat ttttttagatctTGACCTTCTGTATatagattttgagaaatttattttta ttacacCGACTGACTGACTGTTATTCCTACCCCAGACAGTAGGTTAGTTA GTAGGTTGTTACAGTATTCAAAAAGATTcttcaataaaaatattgaaaat ttgcaaattGATTTAATTTATATAGATATTGTTTAGTTAGTATTATAAGC AATTTTTGAAAGGCTTTACAATACTTTTTTGCCTGGGGTAAATTGACTTA TGGCTATGTGCAGCGGTTAAGGGTATGCTTTTTAAGatagcagaaatgca ctgtaagggtatgaattctgagagccaatttttttcgctACACACACCCT CAGTAAACCCACTACCCCCCAAGGCTATTTTTACGAAAATTcttgaattg ttttgtttagTTCTATCACCTTATTCCAGCTTTTACATTTACAACTTATT GGACTAGACCAAGCAACTGTACTTTCTTATTGAAACCTTCCAGTCGCATT GTTTAATTTTAAGTAGTCTctttatgtttcatttttttttatttagtagT TTCAACTGCTTCCTTTCCTTGAGGCCAGATTTCTAGTCTTCACCATTATA TACTATATAAATCTACTTTCAAAAGTTTGGATTCAACATGTTCATTCAAG AAAACTGTCCTTTTTGATTAAGAATTATGAAATTACCAGTGTCAAGTTTC ACTTTTGAGACTTAGAAACCTTTTTAACTTTGTCAGAACTTAAGTTTGTG TTTGTCTGTGTATGGATCTATTTTCCTTTGTTTGCAAATCCATAAACAAG CGTTGTCTAATCCTGAGGAATCTCACATCTAGTAAATTAAAATGggaaaa tatagtaaaaaatATAACTACACTTTTGTATATTTCTATCATTGATAAAT AAAACTGAAATATTCACTTTTTAGTCatgaaaattttacttcttgTTTCA TAACAAACAAACAACTTGTTAACCTCAAATTAAATGATATGTTGGTTTCT CAAGAAACCTTTCCACACTAGCCTATTTGAAACACCTTCTTTGTGAATAT AAGATTGTAAAAATTATTAACCTCTCATCCTCAATAATTAtacaaagaat tttaaaattctcaTTACATTTGAGGTTTTTTGACATCAAGCTTACTACAA AACCgagagaaaattttatttcatctcacaaaaattttttatcaTCTACA TCAGTTTTACGATAGAGATTTGTATATGCTATCAGATTGTGGTTacagtt taaaaattttaattttcttcgTGCTTCAAATATCAATATTCGTATCATGA GTAGTGAAGTTGAAGGTGTTGCAGTGTCAACTATGCCTGTCATAAAAGTT ACATCAGTTGCAAATAGTCCTTCTCCAAATCCAAGTGTATGTATAAATTC ATCAGTTATACTTCCTTAGTCAGATACTAACATTGTATCAATTTTGTGTT TTGTGTTTAGAATGTTTTTTCACAACATTTATTAGTAATACTGCTTTTTC AGTTTTGAGCATTGTCATAATTTATTGACTCTTTTTTTTCAGCCTACACC AAAGAAAGGTTTGGAGAACTATGTTGGTTTCGCAAACCTCCCCAATCAAG TGTTCAGAAAAAGCGTCAAAAAGGGATTCCAATTTACATTAATGGTTGTT GgtaagatatttttgtttttcactCACCATGAAATTGTGATCCTGACATG aagtttgaaatataaatgatcATATTAATTTAGTCAATCGAAAATAATGT TATTTTATTGAGAAGTGGGacttatattattttgcagcgGATTAGAATGA GAGTTTTTTCTCCTTAAACTATTTCTGTCATCATAATGTGCTAGCCAATT TGTCAAGTCATTTTTAATAGTACAAAATTATGTCAATAATGTCATTAGCA AAAATTCCTGAATGAATTTCTCTGAAACTGAGTACacactttttcaaaag taaatgacaaaatgaaaatttgtcacATGGCTCCAGCTATGTAATTAGAT TGTGTTTGTAACGGATATTAATTCTAATAAAGtcacaaagaaaaagtttg taatCCTGCAGAACGTGACAACACAAATTTAAGATTATGTTTTATTTATT ATAAAAATGTCTCTTTTATTATAAATGTTActttacaatgtatagcaatg tgccctccatAAATGTTACTTTAGCAAGGTGTACCTTGAAAAGCCCGAAA TCAATTCACTCCAAAATCATAATCAATATATCATTACAATGCTAAACATT TTGctcattgacaataaaaatcaattttaaaatgTAATCACACTTGCTTT GCCCTGTCATCAAACATGAATTAActgttttaagaatttttattgaatga aatcaaatttgtttacatccaaAAGATGCTGACTGAGAAAGTGAGCCAAT GTGAGATTTTTCATAATTAAACAACCGTTGGCTACTGAGAGATTTTTCTT TAGCTCCAATTTCGTTTTAAACAGTTCAAATCTAATCCGTTATCCGTAGA TTATTTACTGAACTGGACTTATTATAGCGTTCTTTTAATTCTCATCAAAA CAATATGTCAATATATACACAATATATTTATCTTTCACTATAAAACAGCT TGAACACTACCCCTAGAGCTTTTTTAGCGAAATTTTATTCACAGAAAAAA AGAATAGATTTTTTATCAGAATATTACATTTCAATTTACTTTGGCTGACA TAGAAATGTCAACTGTCAAGAAGACGAACTTAGGAGTATGATTTTTCTAC CAAATAAAATAATGTGATGAAAATAATACGAAAGGAGAAATGAAGGTTTA TAAGTTCACTTTGCTTGTCGTAGGTAGGAGACATAACACTTATTTTCCTG AACATTGTTTCGTCTTTTTGACGTCTAAATAATGATAATGTATGGGGATA AAGTACCATTGAGTTTGATGGATGAAGAAAGCTAACTTCATGATTTTGTT TGGGTTTTCCTGGAATGAATAGAAAACTCTTTTCGATATTATGGTTTTAG AAGTCTTTGACATTCTGTCATTTTAGAATGAGAGCTTTTTTCTTCGGTTC GACTTTATTTCCTGGATGACAAACTGTTGACAGTCTAAAGCCTGATAAAT ACTATAAGCCACGTATTTTGCCTCTTTTAAAGCTTTTGTGAGCTGTCAGC AGTGACTTTTTCATATTGGCGTTATTAACATTatgtttcaaaactatttg GAGTTTCAGAAAGTTAATCTATAAATATCTAAAGACGTTATTCAGCTTAT CTGATTGTTATTAAACTATGGAgatattttattactttttacttgataaa CATGAAAAATTCTATGGGTCACTCCTCATATTGTTGCTGATGCCTATCTG AACTTGCATTGCGTGTGTAACTTAACCTCATACAAATTAATATGATCAAT TGACACTATTGACTTTTCGATTGCTCTGAATTTTATACACATAACCATCT TTAGGGGACTCATCAAATATTGCTCCTATCTTTGTTTTCCTGtattatat taaaaaaacttaaaCTGACAAACAAACTTaccttatttctttgttttttt accCGATAAACTGAAAATTCAACCTGTTAATGAAATGGGCCAATGGATTT TGAATTAATCAAACAGGAAATTTCTAAGATGCCTGCTTCTTGATTTAAAC CTGGCAGGGATTTTTTATATGATTATAAAAATGTCGGACCCTTCCCTTTT CTTCATGAATGGTTATCATATGCTTCAAagttgtcttttattttatgtTA CAGGTGAAAGTGGTTTGGGTAAATCAACGCTGATCAATTCATTATTTCTC ACCGATATATACACGAGCACCGTCTACGAAGATGCTGCTGCCAAATTTGG TAAAACTATGACAGTAAGTTGATCTTTAAACCGTTTTTANGCTGCCAAAT TTGGTAAAACTATGACAGTAAGTTGATTTTTAAACCGTTTTTATTCATAT TGTTATCTTTGCGCTCGTGGAAAAGCCAATATTTCATCCGCTATCCTTAT CACTCATGACGTAGTGTTTGATGCAGAAACACCCGGAAAAAGACAGGGCT TTCAGTTCAGAATTTCAAATATTAAAACTATACTATCAGCAAGCTCCGGC CAAGTTTTCAGTGTTTTTGCATCAAAGATATGGGATTGCATAAACAGACA ATGTTAGAGGACTTGAAACATTTTAGCATTACATGAAAGAAAAGCCTGTA TTTAAGGCAGTGGTCAACACATAGTTATAATCTTATTTGTATGTCAAAAA AGGGCGGGTAATTCGTTGTATGGGATATACATTATGTCTTCTATTGATGA TTGATACAATCATATTACAACTCGCTAGAGACGAAAATTCTATGTTCTAA TGTCTAAGTACCAAATGTTTTTTAGACCGTGTAATATCTGTGTTTAAAAC AAAGTCTCTAATTTTTAAACTAAAGAGTCGAATTAAAGATTTATAGTGTT TAGGGTGTTTAGCACAATTAGAACACAATTTCTCAGAGagtaaagaaaat taattaatCACGGCTAGTTCTTAAAGTGATGTTCCTTCCGACCTAGTGTG CTTTTTGATGTAGACATGACATTATAATGTAACAAAATTATCAACGATAA AAACAACGGCCCTAAGGAGTTTCAGTGAAACGTGAATAGTATCAACCCCT TTCATTGCAAATTCTTTCCTTGATTATGTTTAGGTCAACGCGTCGACGTT TGAATTAAAAGAAGGAGGCGTTCGTCTACAGCTGACGGTGGTGGACACGC CAGGTTTCGGTGATAATATTGATAATACTGACTGGTAAGATAGTGGGTTT CTTCATGTCCCTCCTCCCTTTTCAGTCCTTTTTTATGATATTTCAAGTGC TATTGGTGTTTCATTGGACGACTTTTTACTACTTAAATACTGTATgttgt taaaagtttttccgactAAGAACACTGCTAACAATAAAGTCTTTCTTGAA GATTGAAGTGGGAATACCTAACCTATGATTATTACATTAGTGCAGTAGAC AGATAGTAATGTTGGAACTTTTCTTAAAGTTCGCCTTTCTTAATTACAAC AGACCAACTAAGTTTGCGGCTAAGCGATTGTTAAATTCGCTGCCTATGAC TTTACTTTGCTTTGATAGTCAGGACTTCTAAGTTCATGCCGGTTTGCAAA AGTCGTTTTCTTGAGTAAAGAAAAactatattatattatatttatgtatT TGAAGAGAGAAAATCGATGCTAACTCTTCACTTTACCCTCCGACACTCAC ACCCTTCCAACTCTTTAGTCTCAAACGTTGATGCTGATTGATCCTTCAAT GAATGACGAGAGATATTACATCACAACTGATTAATATTAAACcacaaata ctttaaaaatgaCTTCAAATTTTAACACATAAAATAGCTTACGGCATGCT TATAATTAAAGGGTCTTTTCTCACATCATATTTCTTTGAGGTCGCTTACC ATATAGTATCGGTTTAAGTCTTACATAATGATATTGGTTTGAGAACAAAA TTTCTCCTATATTTGGGTGTGAAGTTCCCCAACAGACGAAATAAGATACA TAACACAACTCGTTTTTTGTTTGACGAATTTGTAATCTaaatatagaaat tttatcgataACCATTTGATGGTGAGAAAAAGACTAAgtcattttaactt tttatagaCTCTATCGATGATTTAAgttctttaaattttttcccACTCCA CGAGATTTCTTGGCTTGAGTTAATGATGACTTCATCATAATCTCTTCCCA TGTTCTAGTTCCTACTATTCCTTTTCTTTCTTTGCTAAGAAAAATCACTg cttttcaaaataacatagTAGCCTGGATCGAGAAAGTTTTATCAGCTCTT CAGTGTTTAACCAATTCATAGTTCGAAATTATTTTGGTAGAATACTAACA ATAACAGTAAACATAATTTCTAGATcctcaaatttttcttcttaCAGTTG GAATTCGGTGATACAAAATATCGAAGCGAAATTCGAAGATTACTTGAATG CAGAATCACGCGTAAACAGGACGACCGTACAGGATACGCGTGTTCATTGT TGTTTATATTTCATCGCACCTACCGGCCATGGGTAAGTTCCAACAAAGTT TGTTTTCATCATGCTTACAATATAAAAGATAATGATGgtaaaattttttt ggattatcttttatattgttttatttcaaattgtcagCTGGTATTACGCT TACTGTTTGCTCTTTTCTAAACATGATTGTTAACCATGAACATTTCGTCC AGTTCATAGGAAATATACTCTCTTTTCCGTCTTGCGAGGAAGTGGATATT AAATTACTGAACTTAGCTTTACACTTAGTGTTTTGAGCTCTCTGGTGACA ACAGAgcagtctatgctcgcttacccgagcagcactgatgagtcctggga aggacgaaacacgtgtctgcggatagatATATTACTGAACTGAATGTTGA CACTCGCAAAACTGGTTGCAGATCAGCAAGACGTCTTGTGCTAAAAAAAC TTTCTGCTTAGATGTTTGTACATCTCTTTGATGTAGCAAAACGTCCGATG TGTCCAGTCAGATTGTCATTCAATtaaccttcgcatttcttttcAGGTTG AAGCCATTGGATGtagaatttatgaaaaaattacaTAATAAAGTAAGTAT ACTATGTTTACATCAATCTTGAGAAGGTTGGAAAAATTATGTCAGGGGGG TTTTTAAATTACTTATATTCGTTTTCAAAATGAGTTGCTTGACTTGACCA CCATCATTCTCCACATTCTTTCGAACCAATAATATTTTCTGGAatttcat gtttcaataaacCAACCAATATCTGAAGAAATTCACCCACTTTTACCATA CTGTACAGTGTGTATCACTCTAATCACACGATTCATCTGAGCACTCTTCT TCATACCATTGCTTTTCATTTGGGCACTCTTACCTGACATCAACGCTCTT TTTCTATTCAGGTCAATATCGTTCCAGTCATCGCAAAAGCAGATACGCTG ACAGGAGATGAATGTAATAGGTTCAAACAACAAGTAAGTGGTCCTCATAA CAACTCATTTCGACCATAAATCTACTCCTAACCCTTATTCGAATACTTTC TGTGTCTATTCTTGTGTGAGCCAACGGTTCTTATGATATAACACATGGTT CTTTCTGTCTTTCTAAGCCAGACGCTTGCTTCTTAAACTGGTACTGTATA TAATTTTGTTCtactttttaccttttttagattttaaaagaaatcgaAGA CCACCAGATCAACATTTACAGATTCCCTCCACTTAGTGACGATGAGTCCG AAAATGACCTCGCTGCACTAAGGGTAAATATAATGGTCATCACTATTCAC TGCTTATGATATTATTCTCATCTTTTGTGTAAATGATCCCgtctttttct taatatttcagGACTTTAAAATCTGATTTCCTTTGTCATGGGTCAACTGC CGATCATcgaaatttgaataagattttCACTGTCATTTCATACTCAAAAT ACATTATTCCTACGAACCATCTTTGCAAAGATCTTCAACAGAATAGGCAA ATGTCTATTATAGTCACGACTTTCCCTTCCAATCAACTAAATAGCTCCCA TTTTTATGTATCTCTTTTCTTGCAGCGTATCCCATTCGCAGTGGTTGGAA GCAATACAGTATTAGAAGTCGGTGGTAAAAAAATCCGCGGACGTAAATAT CCATGGGGTATCGTCGAAGGTAAGTGATATCTTTGATCAGGTGAATATTT TGTTTCAATTACTTGTTTGCTGAGCAAAAGAACTGGCATAACTACCTTAT TTATCCAATTTAGATGTTCATGCTTTTAGCAATCGTgagatgttttttat ttttgtttaatttaaatATGCCATTATAATACTTGAGCTTGTAGAGTCTC AAAGGTAATACTGAAACAGTATAAATGGCTACCACNCAATGTCGTTATAA TACTTGATTAACGAGCTTGCAAAGTCTCAAAGGTAATACCGAAACAGTAT AAATGGCTACCACCGCTATGGCTGCTAAAGTTTTGAAcgtttttatttca tttcatttcagttGAAAATATCGAACATTGTGATTTCATCGCACTGAGGA ATTTACTGATCCGAACTCATATGCAAGACTTAATTGACGTCACCAATGAC GTACATTACGAGAACTTCCGCAGCGAACGGTTATCTGTACTTACTGGAGG CGGTAACTCCATCACAAGGTATGCAGTAGCATAGAACTTCGTGTCACTTC AATCCAACCATAGTATAGATCAGTTCAGTGAATTTAAGAAGTTTTCCTta tcatagtttgcacccccccctttttaatagggggggatgccaactttctg gagggcctttgtagggggggtaccgagatctaccgaaaaaactagggggg atgggaatgtaggggggggggggcaaataaNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtcggt ccttttgcccagctgcccccccccccgggagtcaAATTCTTCTTAACTCG AGCCTCTTCATACGTAAAGTAAAATTCATTTGCTAATTTTCATTACCTAT CTATAACGCAACTTTTCTCTTTCAAGTGCTGCGCTGAACATCAATCCCAT GGAACAGATCGAACGAGAGCGCGAAGATCAAGAGAAAAAACTGAAGAAGA TGGAACAAGAAATGGAACAAGTCTTCGAAATGAAagtcaaagaaaagaaa aagaaactcaAAGATTCAGAAGCCGAGGTAAGACAATGTTTTTGCAGTCA TTTTTTTATAGTAGATGCTCTTTGTTTCTGAAAATAGTTTTTCTTATATG TAATGAAACTCTCTTGGCGTTTTTTATACCTTCCACGATTTAAAGTTCTT CAAACAGCCCTAGTTGCCTACCAAAAGAAACGTGATGATAAATAAAGATG TTAGAGATAGAAATGAGCAAATTAAACAAGATCTTGATGGTTAATGAATG ATTATTTGAAATCCATTTCTTTTTTCACTCCTGTTTTCAGTTCAACCGTA AATTTGACGTCACCATGAAAACATTGGaacaaacgaaaaaagaattagAA GATAAACGTAGGAAGTTCGAAGAAGAACGCAACCAGTTCGACAACAGCCA ATCAGCACATAACTTGGATAGTAGCAGGTCCAGTAGTAGATCTTCTTTGC AGAAGTAAGTGAGATGACTGTCTGAGTGGTCTGGTTACCCCCTGTATCGT ACGATTTCGATTGTTGTTGCGCATGCGCTATGTTTGCTTATTCATAAAAA CCGTACCATAGTTTAGTGGGTAAACAAATATATCAACGCGATTTTAGCTG CAATCGaaattgtaaataaaaaaacaacaatgctTTGTAGCTTTAACTTT ACACTAGCTCTAAAAAAATCACGTACGAGTCTTGACTTAGAGGAATGTAC TAGAACGAGACTTCCAgacaaatgattttaaaatccAGTAGATGGCAAAC GATAGTCTCATTCGATAAACGTTTCTTCTTCCCGAGAGCGAatatatttc ttttgaaagtcTCTTTCCGAAGAGAAAGCTACAAAACAGGGGTAACCAGC GGGAGAACAAAATGCTTTTCCATAGCACTCCACTGCACAAAATATAATCA ACAACACACAAATACtaacaaaacaacaacaacaaaatatcTCACAAACA CTCCATCATTAAAAACATACAATCCATTCATACATGCGTATATGTGCACG TACTAGAATTGATACCCATGAAGTGGTCTTTCAAGTCGGCAGATCCTGAA CAGTCTTTTACTGGGCTACAAATTATCTCACGATTCATTAAGCTTTTTCT GAAACGTTTAAACCTGTGTTTATTTACCTCCCATCATACTACGATGTAAA GGTAGAGAACACCTTTGATAAACCCCGTTTAGAACAAATTTTTAACTGCG TTACTTCAAAAACGACACAAGCTTTAGCTTCATAAATGTAGTCTATTAAA AGGACTATTTAAAGTAAAGTTCAGCCGAATTTCTGAGGCAATCTTAAGAC GAAAGATCACTTCATTGTGCCACGAGTAAATCTcagaagtgttttttttt tcattttattttttatgtttcttcGTATTTCTAGAGAAAGTGTCGTTGAT TCGTACGACCAACCATCAAACACATGCGAACATTTTCCCATGCCAGGCAT GTATGTTTCAAAAACAccatcaaaaactaaaaaagattaacaaaaaaagc taaacaaAATCATAACCAATTTCTTTCATGGTATCTTTTcttgcaaaaat aaaatctaacaTCGCATGCGCACTTTTTTTCTAATACACGAGATTTTTGC ATGAAATATTGGTGGTAGTTGCTGTCCAAGacagttttaaagctatttct gGAAAGACTCTAAAACTGACAATTTTCTCTTGGACAACAACAGAACTGAT CAGCCAATCAAATTATTATGCACGATTATGCACTACCTGCACGTAATTTT TAATTGCATTTTGTTCTCTTGAGTATGTTCATTAGAAAAAGGAGTTTGAC AAGTTATCCGtgatatttatgacgtaatgtttagaAGCACTCAAACAAGA CTTGATGTTTCccaataattttgaatttaaaagattacgtcatgaatatc acaaATATCAGGCACAAGATTTAGTACCTTGGAATTTAAGAAAATGTTGG TACCTCGTATCGAATCTGCCGATAATAGAGATCTCGAACTATTTGCCAAC GTCGGCATTTGCCGATAAGAGAGACCCCGACCTATTTACCAGAGGTTTTT TCTTTAAGTTTATTGAAAGTAAGATTTTGAACTAGATTTCATTAAATAGC ACAGTTGAATAATAAGAATATACGTAAAGAATGCTTTTCataattataca tttttcaactcaaagtaaACACGTATCACTTATGTCTGATATCTTTCATA AAATAAAGCCAAATGTGATGGTAAACTTTGTGGTCGCTTTTGTCGGCATA TGCCTACATCTGGCAAATGggtcgaaccttcttttttttccgtggcaaat aggtcgaaccttaaaaaatacggacggcagttaaagggttaaagggataa tcagatggtttgtaatattcTCTGCATGGGTATTCCCTTAAAAGTTCTGA GCAAGACCTCCAAATCTTTTTGTGTAATAGcccttttttagagatttcaa attgtcATAACTCAACGTTGGAAATTTGCTAGCTAAAAATATTTGGAGGT TTTACTCGGGAACATTTGAGTTTCTGTAGGCCAAATATCTCTCTGATTAT CCTTTTAAATCTCTTAGTTCGTTCTATTAATTAAAGTGACTGGGTTATCC TTATTCTGTAAAACTCCTTTTTCGTGTAGGTGTGTCGAGTAGAGTGATCG ACagattaatttttattttattgcatGATTATTTCGATTGAAATTCATGA CATGTGCCAATGTGACTTTCATCGGATTAGATTATGCGAGATTTAATTTT ACGATTCATTTCTGCAAATCAGCGTCTTTAAATATTTTGCGTTGACCTAA TGGCGAAAATCATTTGTAAATGGCCCTGACAAATTCAGAGGGTCTTTTTA GCCGGAAACCTTATCTTAAAGCTTTTCGTGAATATAATATCGCGAGTCGG TGATCTTATGCGATTTCGCTAATCTTATTTTCACGAAAAAGGTAAAAATT CGCGGAAATAAATTAAATCTTGCTAAAATTATTCCGGCTAAAGTACGTCA TTCAGCCCCCTGAATTAGTTTTCCGATAGGAGAAATGATATAATATGGCT GGTGAATTTCAGAAGTAATAGACTAGTTAGAATTAACCGGAacgtttttt tgaaattgttttgttatttGTCTCTCTACAGAGTCGCCgacaaagataaa aagaaaaaagcaaaaggTGGATTTTTTTAAAGCGAAATTTTGTTGATAAT AATCAAAAATCGACAATAGACTTTACCTCGACTCGAGTCCATCGCAGCAG ACGTtggaaacattttttgaaagaatttatATTTTGCATCGTATCCACAC ATCACTTTTACCAATAAATCACGTGATCGGAGCTCGGTAAAATAttatga aaatgatgacgtcatgttGACTAGAAAAGGATTATGGGTCATGGGATATT CTTGGAGGCGATGAAAACGGTGCATTGTGGGACGTTGACTCGCCCACGTT TCATCGGCCAGTTGTTtataatatattattttgatgaatccaattttaca atgaaaaattttagtccttttttcagttttttttttcgtctttttttttt agtgtACCTCTTACAAATTAGCGGTTTTTATCTCTGAGTCTTTTGAGGAT ACTGCTTTTCTCAGGGTGagaataatttttcattcaGCTTACATTGTTTT CAATTCTTAACAAAaatgcctcgttttgaaattattgccatggtgattaa ctcccagtggattttattGAAATTACTTCCTACTCATAAAAGAATCCATA AAAGAATTCATAAAATTCataaaagaatcatttaattctcaagggacata atcaccattgtaattgtttgaatacgaggcaagtgatgttcgtgacgtaa tttatgaaaaggtcatCAAGTAGTCCNtgaggcaagtgatgtttgtgacg taatttatgaaaaggtcatCAAGTAGtccattttttatttcatattgtTT CTTTAACTTGTTATATACTAGATTTGTATAGCGAAATTCTTTGATAGGTA GAAACCAACCAATTTTTGTCATATATCTTGTCATTCTCTATAAGGGAGCA ATATTAAATTCTATATGTCGGACATGTCCGTGAATAGGAATTCATATTTC CCCAAAACTAACAAACTTAAGTTATGAATATTACAATTTTCATTACCAAC AATATTTATAAGATGAACTCGCAAAATTATTTACCGCGggcttttttttt gttattttctatTAGTTATTACCCTCTGCTTACTACTTtataatgtttta atttttactgTAACTTTCGTTTTGAAAAACCGTGAACTTTTTACACCATG AAATAAgtttctgttttcttttgatgCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009313XLOC_009313Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016657-exon-sc0000246-1491911889:285539..285611TCONS_00016657-exon-sc0000246-1491911889:285539..285611Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1510915933:285539..285611TCONS_00016657-exon-sc0000246-1510915933:285539..285611Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1575043694:285539..285611TCONS_00016657-exon-sc0000246-1575043694:285539..285611Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1491911889:289281..289389TCONS_00016657-exon-sc0000246-1491911889:289281..289389Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1510915933:289281..289389TCONS_00016657-exon-sc0000246-1510915933:289281..289389Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1575043694:289281..289389TCONS_00016657-exon-sc0000246-1575043694:289281..289389Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1491911889:291492..291601TCONS_00016657-exon-sc0000246-1491911889:291492..291601Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1510915933:291492..291601TCONS_00016657-exon-sc0000246-1510915933:291492..291601Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1575043694:291492..291601TCONS_00016657-exon-sc0000246-1575043694:291492..291601Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1491911889:292422..292522TCONS_00016657-exon-sc0000246-1491911889:292422..292522Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1510915933:292422..292522TCONS_00016657-exon-sc0000246-1510915933:292422..292522Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1575043694:292422..292522TCONS_00016657-exon-sc0000246-1575043694:292422..292522Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1491911889:293686..293820TCONS_00016657-exon-sc0000246-1491911889:293686..293820Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1510915933:293686..293820TCONS_00016657-exon-sc0000246-1510915933:293686..293820Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1575043694:293686..293820TCONS_00016657-exon-sc0000246-1575043694:293686..293820Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1491911889:294335..294380TCONS_00016657-exon-sc0000246-1491911889:294335..294380Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1510915933:294335..294380TCONS_00016657-exon-sc0000246-1510915933:294335..294380Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1575043694:294335..294380TCONS_00016657-exon-sc0000246-1575043694:294335..294380Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1491911889:294700..294771TCONS_00016657-exon-sc0000246-1491911889:294700..294771Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1510915933:294700..294771TCONS_00016657-exon-sc0000246-1510915933:294700..294771Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1575043694:294700..294771TCONS_00016657-exon-sc0000246-1575043694:294700..294771Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1491911889:294969..295061TCONS_00016657-exon-sc0000246-1491911889:294969..295061Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1510915933:294969..295061TCONS_00016657-exon-sc0000246-1510915933:294969..295061Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1575043694:294969..295061TCONS_00016657-exon-sc0000246-1575043694:294969..295061Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1491911889:295364..295457TCONS_00016657-exon-sc0000246-1491911889:295364..295457Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1510915933:295364..295457TCONS_00016657-exon-sc0000246-1510915933:295364..295457Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1575043694:295364..295457TCONS_00016657-exon-sc0000246-1575043694:295364..295457Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1491911889:295800..295956TCONS_00016657-exon-sc0000246-1491911889:295800..295956Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1510915933:295800..295956TCONS_00016657-exon-sc0000246-1510915933:295800..295956Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1575043694:295800..295956TCONS_00016657-exon-sc0000246-1575043694:295800..295956Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1491911889:296915..297065TCONS_00016657-exon-sc0000246-1491911889:296915..297065Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1510915933:296915..297065TCONS_00016657-exon-sc0000246-1510915933:296915..297065Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1575043694:296915..297065TCONS_00016657-exon-sc0000246-1575043694:296915..297065Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1491911889:297329..297492TCONS_00016657-exon-sc0000246-1491911889:297329..297492Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1510915933:297329..297492TCONS_00016657-exon-sc0000246-1510915933:297329..297492Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1575043694:297329..297492TCONS_00016657-exon-sc0000246-1575043694:297329..297492Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1491911889:300170..301367TCONS_00016657-exon-sc0000246-1491911889:300170..301367Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1510915933:300170..301367TCONS_00016657-exon-sc0000246-1510915933:300170..301367Clytia hemisphaericaexon
TCONS_00016657-exon-sc0000246-1575043694:300170..301367TCONS_00016657-exon-sc0000246-1575043694:300170..301367Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000246supercontigsc0000246:285539..301367 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.63922 7.15898 19.3087 6.457 0.437288 1.74742 14.5163 0.89314 3.01011e-06 0.000173773 0 7.55464e-06 0.313805 4.85327e-06 5.259e-07 1.27638e-08 2.09242e-09 0.000124624 0.0001917 0.0914103 1.89189e-05 0.000240112 5.1496 0.957322 3.4745 6.08686 0 0.134007 10.217 0.598233
Blast
BLAST of TCONS_00016657 vs. Swiss-Prot (Human)
Match: SEPT7 (Septin-7 OS=Homo sapiens GN=SEPT7 PE=1 SV=2)

HSP 1 Score: 464.537 bits (1194), Expect = 4.945e-155
Identity = 251/394 (63.71%), Postives = 309/394 (78.43%), Query Frame = 2
Query:   83 KKGLENYVGFANLPNQVFRKSVKKGFQFTLMVVGESGLGKSTLINSLFLTDIYTSTVYEDAAAKFGKTMTVNASTFELKEGGVRLQLTVVDTPGFGDNIDNTDCWNSVIQNIEAKFEDYLNAESRVNRTTVQDTRVHCCLYFIAPTGHGLKPLDVEFMKKLHNKVNIVPVIAKADTLTGDECNRFKQQILKEIEDHQINIYRFPPLSDDESENDLAA--LRRIPFAVVGSNTVLEVGGKKIRGRKYPWGIVEVENIEHCDFIALRNLLIRTHMQDLIDVTNDVHYENFRSERLSVLTGGG--NSITSAALNINPMEQIEREREDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNRKFDVTMKTLEQTKKELEDKRRKFEEERNQFDNSQ 1252
            +K LE YVGFANLPNQV+RKSVK+GF+FTLMVVGESGLGKSTLINSLFLTD+Y S  Y   + +  KT+ V  S   +KEGGV+L LT+VDTPGFGD +DN++CW  VI  I++KFEDYLNAESRVNR  + D RV CCLYFIAP+GHGLKPLD+EFMK+LH KVNI+P+IAKADTLT +EC +FK+QI+KEI++H+I IY FP  +DDE EN L      R+P AVVGSNT++EV GK++RGR+YPWG+ EVEN EHCDF  LRN+LIRTHMQDL DVTN+VHYEN+RS +L+ +T  G  N+     L  +P+ Q+E ER +   K+KKME EMEQVFEMKVKEK +KLKDSEAE  R+ +   K LE   KELE+KRR+FE+E+  ++  Q
Sbjct:   24 QKNLEGYVGFANLPNQVYRKSVKRGFEFTLMVVGESGLGKSTLINSLFLTDLY-SPEYPGPSHRIKKTVQVEQSKVLIKEGGVQLLLTIVDTPGFGDAVDNSNCWQPVIDYIDSKFEDYLNAESRVNRRQMPDNRVQCCLYFIAPSGHGLKPLDIEFMKRLHEKVNIIPLIAKADTLTPEECQQFKKQIMKEIQEHKIKIYEFPE-TDDEEENKLVKKIKDRLPLAVVGSNTIIEVNGKRVRGRQYPWGVAEVENGEHCDFTILRNMLIRTHMQDLKDVTNNVHYENYRSRKLAAVTYNGVDNNKNKGQLTKSPLAQMEEERREHVAKMKKMEMEMEQVFEMKVKEKVQKLKDSEAELQRRHEQMKKNLEAQHKELEEKRRQFEDEKANWEAQQ 415          
The following BLAST results are available for this feature:
BLAST of TCONS_00016657 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SEPT74.945e-15563.71Septin-7 OS=Homo sapiens GN=SEPT7 PE=1 SV=2[more]
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