XLOC_044323 (gene) - C. hemisphaerica

Overview
NameXLOC_044323
Unique NameXLOC_044323
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_60:1713250..1720300+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044323 ID=XLOC_044323|Name=XLOC_044323|organism=Clytia hemisphaerica|type=gene|length=7051bp|location=Sequence derived from alignment at scaffold_60:1713250..1720300+ (Clytia hemisphaerica)
TGGACAGCAAAACTCCAAGAAGGTAGGTAATCTAACAGTTTGGTTTGTGT TTCTTGTGAGCTCTGCTCTACACACAGACCAAAGCTCTTTTAACCCAAGG TTTTTGCAGTGGCAATGATATGGAAGTCGAGAAGGTTCAGCATGCAACTT CTTTCGAAAACTGTagagatttctttcaagctgTCGAGATTTTCTTTCAT AAGCTGTCACTGCACTGGCCACTGGCTGTCCAAAATACCAGTCGGGTGTT TATGTTAAAAACtgcaatacaccgtttaacagtgtcgactgcgcacgcgt atgaacaatttgccattgttttgattttggcaaccacaggaaacttcact ctcccccaaagtgagcatttttacctaccgcctctacggtggagatggcg aaactgttaaacggtgtattattgctcttttcggaaattattgccaaaaa tggcaattttttcaacgatgaaatgctgaatcagcagaattaaataaaaa agtaaataaatgaaaattgccgttttcagcaattattgccgtttttggaa ataaaagttgattttattatagaCTGGCACTAGTctaattttattattga acacatggcatttgacaccctcgcgataagtaggcccactgtgcctcgtt taattttgttttcaactggtttttgttggaaatgcagataacaaaatcga gtcataatgtaaacaaatttacactcttaaaaatccgaaaaacctttttc tcaatgcaattttactatttgcaaacacctctgacatctttgcccttaaa atgacaacacattttgctgattcagcatttcattgttgaaaaattgccgt tttcagcaataatttctgaaaagagcaataattgcagtttttttcttaaa cacccgactgaaCACTGTtgctgtttttgatgaaaacGCACGTTCAacaa aaatctttggaatagCATGTCTTGCAAGGTACCGtgcataagttggtcta atatcgacacccCTTGTCTAGTTCCAACACCCTTCTTttagacaggaata atatgaaagtttgaaTCACTGAATGAAAAAGGATTATCCCTCTCTGACCA ctcagaaaagaaaaatagttttgaccTTTCTATCTATGAGCCCCCGCAGC GGTTTGCATGATGACGTGAttaggacttttttcttgcatgATGACGTGAT TAGTGATTTTTTTTGCCGTGAtaaagattttggcgtgatgcactgatagg gcaaaaatttgaggcgtgatgcgtgatttaggctatttttcgctattttc tgtgcgatgacaaattttagcgcgtgattaggggtgcagctgggggggcc tcatctatttcagctgataaaaaaggGGGTGTTGGTATTAGGGAAGaggt gttgacattagaccaaattAAGGTTGAAGGTAATAAACATTAAACTTCTC TTGCAggatagacctaactcttcatacaaaaattacgggaaacacatatt tggactttgtaccctatgctgcacgccaGCACTGAAGCTGAAGTCCcgca aaagcgggacaaaaatcagttttttgcagtttgcaaaaaaacgccacata gaagatctttcaaatcagtatgtgaatagagcagtaaaaaatacaatttt tcaattttccttttttttgcaagagTTCTAAGACGGGCATTTGCATGTCC CGAGAGCGGAAATTAgatgagagtaaaagacggcGTTTTTGTATACAttg caaaattaatttttgagttaaaatttttcagccaattttcatgattttga tgacgtcacagaaataagaatttgaataaCTTCTAGTAGGAGAAAgcttt tgacttaaaatttccACCAAATGTGTAAATCAATAAAAGGAAGCGatcca caaaaaaaaaaaattctttactgGCATcagcaaattttgcaaaaaaatga atcATTTTTGACTTGAACTTGAAGGTTCCCCTCTTGGGTGATTCACAACA TGTAAAATAAGGGAAGACGCATGGGTAATTGAAAAAGTAAATTCAACATC TAAAAATATCCACTCAGGGAAAAGCTGTGTACTTTTTTGgcttaattcaa tatttttttaagataGACTGCCTGATGTccgcttgacccccccccctttt aagcCCATTGTGCATCCAGGTACGTTAGATATTCTTTTCGTGTTTTTATT GACTGTAGCAAATGATAAACAAAACAACAAGATTTTtatcaatgatgaaa aataaagtAACAACTCCTGACCCTTCACAGAAgtcaatttcatcattttt tcaaaagtcaaccAAAAGGAGTAGTAGTAACATGTCATCACCACCAGCAA AGATTGCCAAGAGAAATGATGGAAAGGAGAATGCTACAACAACTAGTCCT TTATCACCagaacagaaaagaaaaatggaagAAAACCGGGTAAAAGCACA GGAGAAACTTCTTGAGAAGACTACTCAGGAATTTGATATTGGTCAAAGTT GGAAGAAGGCATTAGAGCCAGAATTCTCTAAAGAATATTTCGGCAAagta ataaaatctttaaatagtATTTGTTTATCGATTTAATTTAACTAAAGTTA ACTCTGTTTATTTTAGTGGCATTCTTTTTATCTCATTTAAGTGCATTGCT TTGTTTGTACAAAATACCCATTATATTTATTAGATGCAATATAATCTTTG GTTATAAATACATGAAACTAAGGTTTTATGAAGAATTCACtgcaatcttt tttttaagctCAAGAACTTTGTTGCAgctgaaagaaaacaaaagacaaTT TATCCACCtggtaaatatgatattttttataCCATTATACCTTAAAAAAC TTAGACCAGCAGGTAGTTTTAATTCCCACCAGTCAAATTGAAATCCAATC TTAAAAATCCCAGCTTGAGAGAGAATGATCAGAATGATCTATCAGAGGAA CTGGCCTAAAATATACAAATAATGAATTCTAGGAAATCACAAAATGATTC TGGACctttaaatgaaaaaactttataGTCATATTATTGTaacagaaaat attttcctACAATACTATCCAATCACAGGGTTTGATCATTTtgataaact tttaaaatttaaacgATTTGACCAATATGTAACAGGGTCAACAATAAGTA ACCTTTTTTCATTCACTTTTAGAAAAAGATGTTTTCAGTTGGACCAATTA TTTTGACATTAATGATACAAAAGTTGTTATCATTGGACAAGATCCCTATC ATGGTCCAAAACAAGCACATGGTTCGAATTTATTAATCAAGTTACATTCt actaaaaatatttgtttatatttttcattcgGGTTAAAGAAGATGTCTCA ATAAATTGAAGGCCATTATTCGTTGTGGCAAAACGTcatactcttgggta cctaatagcctaatataataataacctaatataatataataataacctaa tttttggaaaaagtttttgaaagttccctcttttgtcctaattctgctgt attagcctccttttcaaaaatattccaccAATGACATTTTTGTTCTAATC CCCCTTGCTTATTAAGTTTCGAGATTTTTTCTAACCCTCCCCCGGCTTAT TCCAACCATCCCCCctccggctattaggtacccgagagtatctgAAGACA CTAAAAACTGTTATACTTTAGATATAGAAGTTCAAGTTGGGTACTTTTCA GGGCTTTTTCCGGGATAGTGTCTTCTTATTTTTGCTTGAGGTAAATTTAG GCAAGCATTTAGTGACTAGAAGAATATACCCCCTGCTATAATATCGAAAA CAAAACTAACTTATGAAATCTAATCATATTATATTTGTTATTGACAGGTC TATGTTTTAGCGTGCAACTTGGTATAACTCCTCCACCAAGGTTTGAAAAA CGAGTTTatatttcgaaatttcaaaatctcaagttttttaaaaataattc ctATAAATTATAAAGATAAAGATTAAATATATTAATTAAGTATTTGCAAA AGATATAATGTTTAAGTTAAGTTATAAGTTATCTTAACCCTTCgagcaat aaagaaaaaaaattctcgaaattgactgaaattgaaaattgaaattttgc aagtgtGTATCTTTGGTAAGACTTTTGAAGGTCAACATCAAGATCATAAT ATAGTCAACCTTGAGATTGTAAGTCCCCCAGGATGCTTCCCCTAGTGAAA ATATAGGAAAATGCTTGAAGGGTTAAAATCATTCAGGGCAttgtttaaaa agattttagttTTAACCTCTGGAGGGATTGCATCAATCATATTACAATTT GGTCTCATTATATTCATATTGCATGTGTATTATTTTCAAAGGTGGCATAA TATTCTGAAGGTCAGTTTTCGGTCGTACCTTCATATCTTATAAAATATCT TGGAAAATGAAAGATCTAACAATATTACTCTTTTGCAGACCTATTCAAGT TTAGGTGTATTACAATCTTTCCTATAAGACAGCAAATAAATTTAgaatct aaattttcagtttgaagaaTATGTACAAAGAGTTGGCGAGTGATATCGAA GGATTTGAAATCCCAAGTCATGGTTATCTTGCCGGATGGGCAAGCCAAGG TGAATGAAAGTATTTAATCAATTCCTACTAATGAAGAGCAATTAAAATCA TATTTGATCAGATGTTAAGATATCTCGCTTAAGATATTTCACTCTCAGGC TTAAACGAAACTAAAAGTAGCCGTACTAATGATCAGTGGCCGTATCATGA ATGccgagcatccagctacggtgcgcaagattgtgggttcgatcccccag ccgggtcataccaaagattcccaaaatggtacttaatgcctctctgcttg atgctcagtcaTTAAAGGGACGGATCaggggtaagtggagaaatcaaGGG AAAGGAGTAGCGCCTCCCCTACCTCAGGGTAAACAGCTAGAGAAANAGAC GGACCaggggtaagtggagaaatcaaGGGAAAGGAGTAGCGCCTCCCCTA CCTCAgggtagacagctagagaaaagagagcctttgggtcgccctcgact gcggtcgcaaacttacttactttactaatgatgtttatatttttgtttta attttaggCGTTCTGCTATTAAACGCTTGTTTAACAGTTGTTGCTCATAA TGCTAATTCACATCAAGGAAAGGTATGAATCATATTcctctaaattttaa attcagCTAATTTTCTCTGAATACACTTGAACTTTGAAGCCGTTCCATAA CTTTAAGATTGAATTTCTgacataaaaaagtgcttataaaaatcttTGTT GAACTTCCATCGTTTATTATGAAAGTAACCTTGGGAAGTTCCATTTACAT CTAATCGGGTATACTATTGTAATTCCCTTTGATTCTAATATTTGTTAGCT ACAATCAGTGCAAAAATGTGTTGACAGTAAGTCTCGAAGAATACCACTAA AACTTTTATTTCACTGCTCAGATCCCCAATTTCAATGGTTAGAGAACCGA GGATTTCCTGACCGGGCAAACACTGTTTACTGCCAAATAtctggcactga ttgtagttaTTTGGTGTTTACTAGTGAAAATGTCACCTTTATGCTTTTTC CCGCTCATTTGTGAAGTACTCTACTGTCAAATTTATTTGTCAATTCGTTA TTTTTAACAGtagtaaaaagttttaaaaacattattgTCCGTCCCTTTTC GCCTGAATAATCGTTAACGACTACTTTTAAAGTtcaaagtatttattttc actatcaaaaaaagtgaatataaagTGCTGGAAAAATACAGAAGACTAGT CCTAGaccaaacaaaaataatttctttcattctttCAAGGGTTGGGAAAA GCTGACCGACGCAACGATCAAATGGATCGATAGAAATCTTGATGGTGTTG TCTTTATATTGTGGGGAAAATATGCTGAGAAAAAGGGTAGTTTTATCAAT AAGGTACGACCATTATGTTCTTTTCAACAGTTTGTGTACTTTATCGCTAG AAAATGAGTCGGNAAATAAAGTACGACCATTATGTTCTTTTCAACAGTTT GTGTACTTTATCGCTAGAAAATGAGTCggtaaaattgatgaaaaattgcT TACTGTCGTAATAttttaccgacgaatttttatagtcgacattttttttt tccggcGATTATTTTGATCAACGTTTGATTTTTAgctcaacaaatatttt ttttaccaaagtTATTATTggtttaaaattaaaaactatCTGATGACAAT GCATTGAATCTCTGAAATTATAATATTCTACGAACGTATTTTTGTTTAGA GTCGACATTTGGTATTGACGGGAAAACATCCTTCGCCACTGTCGGCACAC CGTGGATTTTTCGGTTGtaagcatttttcaaaaaccaacgagtatcttca aaaacaaaagaaaaaacctaTCGATTGGAATTATTTACCAGAGAAACTTG ATTAGATTTCAAAGTTGACTTGCTTTGAAACACTGATTTTCATGATAGAT TTTCTACTAGAggattttatgaagaaaatgcTGGGTAATAGAAGTTTTGG CTTCACTAGAAGTTTTCTATTGTAAAGGGGAGATCTCAAGAAGTCTAACT TAACTGGACTCGTCTGATAGAGAGAAACTGATATAAAGAATGATTTTGAT TATGGTGATGCTATATAACACCCCTTCTCGCAGACAAGGTATGACCCCCT CaaactggaaaaattgaccaaaatatcgccCCCATTGGAAAATAATCATA TAAACAAATCCtatactgcaaaatattgtgctttcTTTCATCCCACTGAA TTtgctgacttgaaaacaattttgaaaggaagattttgcgcggcacatac cgtcgtttcgaaatcgagtcCCTCCCTACTTCATAAAAACATGGCCTGgt ctgttatttttatcccatttcactttcttttttttttttattattttaca cctaagttttttttaatgttgttttgtaaatatttttaaaagcttAAAAG TATCAGAAatgtaaatataaaatttttagaaaccaaagaGATAAAAACAA C
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071320TCONS_00071320Clytia hemisphaericatranscript
TCONS_00071321TCONS_00071321Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071320-proteinTCONS_00071320-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:1713250..1720300 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
UNGuracil-DNA glycosylase isoform UNG2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
28.02 24.09 158.03 164.82 3.89 3.92 12.21 13.34 14.6 11.72 9.1 9.24 7.14 5.2 6.93 6.56 12.77 10.69 0.88 2.08 6.91 6.32 15.81 16.43 9.49 13.72 3.33 1.61 6.89 8.65