XLOC_044066 (gene) - C. hemisphaerica

Overview
NameXLOC_044066
Unique NameXLOC_044066
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_58:847054..851511+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044066 ID=XLOC_044066|Name=XLOC_044066|organism=Clytia hemisphaerica|type=gene|length=4458bp|location=Sequence derived from alignment at scaffold_58:847054..851511+ (Clytia hemisphaerica)
ATGTGCCAACATTAAACTGTTAATATTATTGTTTACTGTTTTCTTTAATT CAAAATCATTCATGcgcaaagttttctttttttaactttagagaTTTTTC TCCATTCGTAATTTTCCACTTATCTTGGACtagaattcttttttattttg gggTTGTTTGCTGACCGAAGAAATCCAAGGTATATTGTCACTTCTTCTGT TTTTCTTGCACTTTAAATAAATGATTGTTAGGCCGTTTATCTATCaagca aatattttttcaaaatttctttaatctCGTGTATGTATGATAACCTCTTT ATGACAAAGAAAGCTTATCTTCAAAAGAGTTATACAATAAAAGATTGAAG GCAAATGATATTATAAAtgatgagaaaaatatttcataccTTTCCTCCTA CTGTAAGCTTGTCCCTTTTTCTTTAGATGAAATTGACATTGGTCTGTGTG GCTTTATTCGTCGTTTTCTACGGCGCCGAAGCTCTTAAACTAAGAAAAAA GAGTAAGTTGTTAGTTTAAATGGTGCAACGAGATTTAACCTTGTATAGTG ATAAAGAAAATCTGAACGTTTCAACTTATTGTTCGATTTTtaatgaatac acgttttttttaagaaactagttttaccaagcagcctcaatgtttcttaa gaaatcggccttttgagccttaaatgtttcttacatgtttctaaACTTTG TCAAGCTTAAAGGACACTTTCTCAAGTATTTCTAACtgttatgtaagtat ttttctggaactttgattggaaggtttcttaaaaaaaaacgaattaaaaa atgttatcttctcattctcagcctcagtatgtttcttagttttcaggcat tctgagcctcatgtttcttaaaagtgagtttcttaaaaaaaacgtgtaat tttaAACAGGAAAGCATGAGCGCTAATAGTAAAATTTTATGAAAGGAAGC CATGGTTAAAGATTATGACAAcgatttatttcttttgttatttcaaGGAA ACATTCCATTGAATGCTTACTACTTACCCAAAGACAAAAACTTGGAACGA GAACTTGGTAAGTGTACATCtatcaacatttttcattttgatttgacttt cttgtttactttttatttttatctgaaCCTGAAAGAGAGAGAGAATACAA AAAAGCAATACTTCATTGTTTATTATTAATTCTGAATATCATCATAAATA ACatgttttcttattttaaaGAGATCGAGAAGagaagtgcaaacccatgt ggAATGGGATGTGCTGCCGCATGTGCACCAGCCTGCCAGCCAAGCTGCTG CGCtgcaccacctccaccaccaccaccaccacctaTGCCAGCCTTTGGCT GCGCACCAATCTGTAGTCATTGGTCATCCATGATCGCTGCACAACCTGCT GCACCTATGCCTTGTCCATCACAATGTCAAGCTATGCCAGGGTGTTGTAA CGCTCCACCTCGACCACCCCCTATGCCATGTGCTGCACCTCCATGTGCCC CACCACCCATGCCATGTGCTGCACCTCCATGTGCCCCACCACCCATGCCA TGTGCTGCACCTCCATGTGCCCCACCACCTATGCCATGTGCTGCTCCACC ATGTGCACCACCACCTATGCCTTGCGCTGCTCCACCATGTGCCCCACCAC CAATGCCTATGCCTATGCCATGTGCTGCACCTCCATGTGCCCCACCACCT ATGCCATGTGCTGCTCCACCATGTGCACCACCACCTATGCCTTGCGCTGC TCCACCATGTGCCCCACCACCAATGCCTATGCCTATGCCATGTGCTGCAC CTCCATGTGCCCCACCACCCATGCCATGTGCCGCCCCACCATGTGCCCCA CCACCTATGCCAGCTTGTCAGCCCTCTTGTGCTCCTGCTTGTTGCATGCC ACCACCTCCACCCCCTATGCCTATGTGCCAACCCTCATGTGCACCAGCAT GTTGCATGCCCCCTCCTCCACCACCACCAATGCCTATGTGTCAACCATCT TGTGCACCAGCTTGTTGTAGACCTGCTCTCCCACCACCTGCTCGAGCTCC CCCACCATGCCCTGCTGGATGTCCAAGAGCTTGCTACCCCGCCTGCCGAC CAAGCTGTTGCGCACCACCTCCTCCACCCATGCCATGTGCAGCCCCACCA TGCATGCCTCCACCCATGCCATGTGCAGCCCCACCATGCATGCCTCCACC AATGCCAATGGCTATGCCATGTGCAGCCCCACCATGTGCACCACCACCTA TGCCTTGTGCCGCCCCACCATGCGCACCTCCACCTATGCCTTGTGCTGCC CCACCATGCGCACCACCACCTATGCCTTGTGCTGCCCCACCATGCGCACC ACCACCTATGCCATGTGCTGCCCCACCATGTGCACCACCACCTATGCCTT GTGCCGCCCCACCATGCGCACCACCACCTATGCCATGCGCTGCTCCACCA TGTGCACCACCACCTATGCCATGTGCTGCCCCTCCATGTGCACCACCACC TATGCCATGTGCTGCCCCACCATGCGCACCACCACCTATGCCATGTGCCG CCCCACCATGTGCTCCACCAGCCCCAGCCCCTTGCGCTGCACCACCATGC CAACACGTCAACCTTCCACCAACAGTCATCAACCTTCCagctccaccacc tccaccaatGCCATGTGGTCCAACTTGTGCTCCAACTTGCGCACCTGCTT GCTCTAAAGCTTGTTGTAGCAAAAAATAAACACACATGTTAGAGAACTAG ACCTTTAATGTCAAAGCAATGAAACATCTGTGAAAACAAACAGTGCACAA ATAAGTGGTTTGCTCCGAGAAGAATCGGCACTACGTGTTTCTGAGTAAGA TcaaaagaaatattcgaatattaTGTAAATAACACAAGAGAAGtggttta tttttttaacaaattattATATGTGTTTTCGACCTTCATTAACTGATAAG tatataataaaatattgaaaagggGCATGTGTTGTTATGTATTAGAGACA AGAAACTGTTCACCACCACTGGCAATAAAAGCGACATTACCAAACATTGT TTATATTAGCTATATTTATATGGGAATGCAAGTCTTGTCTTGAAATAATA ACAATGCctatttttcaatactttttaaacattttataatttgatttttt gtatcgGAATCAAAATTTGTCATTATCAAAGTCATTTCATGTTCAATTAA ATTCTTGATAGTTCCAATATGTTCATCTAAATCTCCCTTTAATTTATTGT CAAAGATGTTCTGGGAGTTTTCGTAAATATAACTAGTATCATGTGTTTTC GAGGGGGGTGAATTGGCTTGCTCTTTACAATTACAGTCACTGCATCCTCT TTTAAGTTCTTTTTGCTCGCTAGAACAATTATCATTTTGGGGTTGCATAT TATCAAAGCCATCAATAAGTGTATCTATTGTAGTGTTATCCATAGAATCA TGCCTTGTGTTCTTATGACCTCCCAAGTCTCTTTCTTCTGTCTTCCGTCT GTTATTCTGAGCAGCTATTTCATCAATATGACTTTggttattttcaaaat cttcaagCTTGGTGATCAAAGCTTCAAATTGATCTCCGGTTTCTTTCACA AAAGCAGGCTGATTCATAAGAAACATATATATCGcactaaaacaaacaaa ataaacaaatatttgATACAGCTACCATTTATTTAATGTGAAgtataaat aattgaaaaacagATACATGGCAGAGGAAGGGGAAGAAACAAAGTGGAGT AAAACAGTAACATCATCAAGTCTTTTTCAAGAGCTTTATAGTTTGTATAG TTATTAACTTACCTGACTTTCCCTCTGAAATGAGaaagtttttcgaaaaa tatgccaGATGATTTGAAACCTTCGTTGAATGCAGTCTGGAGAATGTAAT CTTGGCCCTGGGAAATTCCTTCACGAAATCCATCCTTATAtaataaaata acattttttcaaaagaattacTGTAATGTTGTGTTATTAAAGCACATTTT ATTTGTGAAATATGAAAACTCTATGCAAACTTCATCAGACATCTTTGATA GATTTGATAGAATGCTCCACCATCAGCCAAAAAACACTAATCTTATAAAG AAGTGTGCATCATATATAAACAAGAAGCTGAAGCAGCATGAAGGCCTAGA CATACAATTGATTATTTATCATTGGTACTGATTTTTACAAGACattgttt cttccaaaatgaacttgaatcaACAAAGTGCTTAGACtgagagaaaatca aaaattcttaaaaaagtatttacctttgtatgtttatgtttcaaagaatt gaaatcattttctaaattttcactttcatctAGCCAATCCATGTCCtcca ttttttataatttttcaaataatttgctACTAGGCATAAACTGATTCTAA GAATTTAAATGGTAAGGTAAATTGTTAATAACAAATAGAATTAATGATCC TCATAAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070847TCONS_00070847Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070847-proteinTCONS_00070847-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_58supercontigscaffold_58:847054..851511 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.16 0.23 0.07 0.22 0.34 0.26 20.19 23.42 7.52 13.45 26.27 11.03 41.54 37.87 26.69 111.86 49.71 53.54 0.06 0.23 42.35 54.58 29.49 29.53 29.34 30.9 5.8 2.12 0.07 0.31