XLOC_043726 (gene) - C. hemisphaerica

Overview
NameXLOC_043726
Unique NameXLOC_043726
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_516:274536..285539+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043726 ID=XLOC_043726|Name=XLOC_043726|organism=Clytia hemisphaerica|type=gene|length=11004bp|location=Sequence derived from alignment at scaffold_516:274536..285539+ (Clytia hemisphaerica)
GGCTGATACTACTGCACCACACAAAACCtatgaaagattttttatgaaag ttgCTATGAAATtctctttattttgttttactGATACGCCTTCTTTTTAG ATTACATAAAAAATGGAGACAAAAGGAGAAGAGTATATTGTATCCAATGT TGACACTGGTCGCAACATCCATTCACCTATGTACCCATGGCTTATTTTGT TCTCGTATAAAAAGTTGTCTGAAGTGAACTATTTCAACCACATTCATAAC CTTTATCACAACCAGAGACCGTTCTTCAATTTATTATTTATGACATTANA ACCTTTATCACAACCAGAGACCGTTCTTCAATTTAGTATTTATGACATTA ATGATACTTGGTGCATCAATATATGCTATTTTACCCGAGACTGTTCTTTT ATGGGCAAACTTACTGATACAAAGCACATTATCACTGACTACTCCAGTCC TTTTATATTCTAATATGTACATCTGGGTTGGAATATTGATGAAACATTTC AAAGTATTCTTTTCAATGAGAGCTTGTGTGGCATCATGTATCATTCTAGA ATTATTACTTGAAATATTTAGTAATGTTTTTGCAGTGAACATTAAAGCAG AATCTCTGCTCACTTTGACAATACTGACATTAATGTTTGGGATTGGCATG ACGACAAGCAGAAGCTTTTTCGAAAACATGAATAACATTGGAACATTGAT CATTGTCAATTCAATCATTATTGTCCGACTTCTGGTCATTCCATCAACGA CAACATTTGGTGGTTGGTTTGATTTCTTGAAGCCGATACTTGTGTATATG TACATCCTATCTGGTATGTTTTAAGCTTTTCAGCTTGTCTTTCTTATCGA AATTATAGATTGTTCAATTCTATTTAAACACAGTTGAAGAAGCAAAAGAG TCTAACCATTAAAAACTGTATTACTAACACCAACCCTCTTTTCATTTTGT AAAGTCTCTGTGAAATAATCACTtaacttttctttcaaatgtgTAATGCT GCTATAACATTTCTACTTCAAGTCACCTTTCTGGAAATCTTGATGATGTT GCTAATATTATCTACTACTGCTATTACCTTTCCAGAAAACTGTCTTgttc ttttgattttattgCCTTTGTTGGTTTACTAATAGAATGCTGAATAAAAT CTtaatttaataataataaagtttAAACAACCTTATTTTGATTGGAATTT CACCCAAAGCTGTCCAAGCCTCTTGTTTTTGTGTGTCATCCATCATGTTC ACATTACTTTATTGTCAGCTGGCTACTTTCAAACAAACGGATCAATTTTA ATGATAGTATAAACAACCTTAGGGGCTTATTTGAAAAGATTACAATTTTT GTGTGAGTTTCTTTATCAAAGCGTTTTTAGTTTGTTTGGTTATACGTata ttgaaatcaaaatattttgaaacagTTCTGTTTTTCGTATTATGCTCACT TTCTCATGTTACACTCTGTGATTGTGAATTGAAGGTTTTTTGGTTGAAAT GGTGCATgctttttgactgttttttttggttagcttttgagatttttctt tcAGGAAGTTTTTAGGGAGGAAATAAAAGTTTTCTGCTCGACTGGAATCT TGGAAATTACTCATTTCTTCCCAAAAAAAGAGAGGAAAAGATATTGCAAG TGTGAAAGATTTGCAGAAAATGAAGGGTTTTTTCACACACTTTTCTCACT TCGATGGAAACTCTTTATTGGACAAAATCAAATGGAATTTGAATTTCTAC CTTAAAAAAAGGAGAATTATTAAAATCAATTACACCTTTCTTTATGTAAA AGTAAATCTCCCATCACatcaaaatgaacaaaaatttcccaaaaaattta tCGTTGAATCAAAAAATGACTTcgattaaataattttttgtcgACAATTG AAGTGAATACAAAAGGGTCATGTCACATTTAAGTTTGAAACTCCAATATA TGTTTAACATGTTACTTTTTCCTTctcgaaaaactttttttcagaagagt ccattttgaaaataaagggatacgAAAAGCTAAGTGAGTTTAAAGGGGTt taaagcaaagattttaatgtctactttattatttttcatcTCCTTATTAG GtccttttgtcaaaatttggatcaattgtTATTGACATTTGAcagttatt ttttttaaagaatctgATATTTTTGTATTAGAGCCATGATAGTCAAAATA AACGACATGATTTTTGCAAGAAAACGTGGTTAATTTTCTTGATGGTGGAT TGAAATTGATGTTTTCTTTGAAAACCAGATTCAAGTTTCATCTCTAAAGT CTTTCTTAATATCTTTTGCCGTGTCACAATTTTGTTAAGAGCTATAAGTG ATTTTGTCCCCGAATTTGTCTTCGAATTATGAaggtttcgaattttttat tgtgtttttattttgttgactTCGATTTATTTTCTTGGGATGTAATGAGT TGTGTTTCTGTCTcgttgaactttttgaaaaaagccaGATTGTTGGATTT TGTTTGGCTCTTTTGATTGTAAACTAATAGTGGAGGTTATGGTGGGTGGT TCTCTTACACCGTTCGTTCTATAACAGCACAGTTTACTCTGCTACAAAAC TCTTTGATTGACAGGTTTTTGCTAATTGGAGTTTTGGCATTTATTTGGAT CGTTTTATATGTCGACattattattttgtttgtttctcaAATTGTGTCCA TTATTCTGACACGGGTGCAATCAATTGttatttatatctttgttaTAGGA TCCATTTTATTCATACTCGAGAACAAtttcagtgccgtagcaactggggg gggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGCTATa tccccaataattttttcaaaaatggttattttacaaaatgcaaaattttt ctagttttttcttgaaagtattttgttttgagtgcattttcaagcaatct agagcttaaattttcaaaatttctcaccTCGGGCCAAATctgttggccct cgcggtgtcaaaaacttcagcccccctaaTAAGAAAATGTTTCCTAAGGC ACtgaatttaagaacaatgataAGTCTTGTAGGTCTCAACAACTATTTAC TtgttctttgaaaaatattactCGTTCAATCCGATTCCCAGcttttgttc ttaaattgttcttatttttttgcgatatttttgaacctcattgttcttat aaaattcttcaaTTGATGTGTCATTGTTACTTTTCTTGTAAATTCTTATA AACTTTGATTTATATGCCatctttaaaaatcttaaacCTGTCATACTAAA ACCATGATCACTATCTAGCTTGTTAAAAGATTATTTGATAAgatttaaag tattttattcTCTTTGAAGTTTTGATTAAATCTGGTGTCGTCTAATTCAG TCTTTAGCTTGAAGATTGAATCGTTTGAATCGCTACTATAAGTATAAATG ATTGTGGATTTCAAGCAATGTGTAGTTTGTGACTACCTTCTTATTCACTG CATGAATTTGAGCCTTTCAAAATATGTGAAATGTTTACGTTTCACTTGCT TGGTCTTTTGAATGAGTTTCATTTTGTCTTGTATAAGCAGTTCTATAGGG ATGGAAAGCATCCAATAATTTGTGTATGTATGCTTGTGTGTTTATGCTTT TATGTGATGTGTTTGTCAAAGTTGTTGTCGTCAAGGCTATGTGTTTTTTA AACATACCCTTCATTCTCTTTTTATTGTGTTTAACCTTTCGTTTTTTTGA TTGCACTTAATAAGGTTTAAGCACACAAAGCTGCAGTTTAAATATACCGA TGTACTTGATTGTTTCTGTAAAGCGAACAACGAGCAACgatgtttataat caaataGTCAAGAGAATGCTACCGTTCATTCTTACTatattcttttttat caaaaaaaagacCTTTCCTTTCTCTTTTTTACAGAGCAAACCTATAGGTT ATTGACAACGATCCTTTTTTTGTTAATCCCTATGCACATATTTTAATCGC TTTGTCTTTTagggtttgaatttttttttgtgtgcgtaaaaaaatactta tcGTGAtctcatatttatttttttgtttcttgtgTGTAAAATGTAGGGCT TGCACTTTCTACTTGGCCACCTCTAAAGATATTTACTGAGAAAGAAACAA ATCGCAATTTGACGAGCAGACATTTACAAGGCGAGATGAACAACTCTATT CCGGTCATTCGACCGCGACGTGCATCCAGCATCGAAATGAAGTCATCTCA CATGCAAAATGGAATCCTccataatcaaaacaaaacacgaAGAAAATCTC TTCCTGCCTTGGGTGGTGCTCCTTCAGCTAGGGTATGAACCTCTTTTTGA TTATATTTCATCCACATATtattttatcggcgatccaaaacaTGCATAAA CATCTAACATGTTGTTTTATGCAGCTCTCTATAGGTTTCTATTGTCTGCC AGGATGATGACCATTTTGAGATGCAAAACACTTGATATACaagtcatttt tgttttgattgtttgaattgtttcaaaatgttttctGAGAGTTTTGTTTC CAGAACTCTTGTATAAAAACTGATGGGCTCTCTTTATTTGAATTTGTACT GGCTGACTATACCAAGTTCAGACTGGCTAATCTCAAAGAAAAGAAGGGAT AGAGAATGGCTTTCAGAACCATATATTGAAAGAGAAGAAGAAAAGTTTGA TATATGATTTTTGGTGGTGGATAGTTTCTCTTTGTTGTTTAAAATGGCTC CATAGACAGTCGTTTTGAAATGTAGTCTTTTCTTCTTGTTTGTTGTGTCC GTGATTTCTTCTCTCTTCTAAGGGAATGGCTTTCTTCTCCCCTTATATTC ACTTTATTTATTGTGTATAAGTTTTTCATCTAATTTGGAATTGTTATTGT CTAAGCAAGAAAGTCCTATCTTTTATGTAGTGAGTGAAATTGAGTAATGA AAtgttgaataaaaaaagaagaagaaaaatatcttCTGTTCgatttattt ttcgttttttttcatcCCATCATCTCCCTCTTACCCCTTACGTTTTGTGA AAAATCCTCGAGGCCTACGGGCTTAAAGGACAAACTATAtagttttttga tttgattctacAATAATTTCTCGTCTCTTATCCATCCATGCACATGAATA ATTTACTGATCGCTCGCTACTTAATAATGCTGCGGTTACTCCTCAAAGAA TGAAGAatgctttttttttcaaagataaagTCTTCGCTTCGGAATCAGTT CAATCTTTTACTTCATAAATAAATCACAAGTTTACTAAGGGATCTTGGCA AGAACNAttgtttcaaaatgttttctGAGAGTTTTGTTTCCAGAACTCTT GTATAAAAACTGATGGGCTCTCTTTATTTGAATTTGTACTGGCTGACTAT ACCAAGTTCAGACTGGCTAATCTCAAAGAAAAGAAGGGATAGAGAATGGC TTTCAGAACCATATATTGAAAGAGAAGAAGAAAAGTTTGATATATGATTT TTGGTGGTGGATAGTTTCTCTTTGTTGTTTAAAATGGCTCCATAGACAGT CGTTTTGAAATGTAGTCTTTTCTTCTTGTTTGTTGTGTCCGTGATTTCTT CTCTCTTCTAAGGGAATGGCTTTCTTCTCCCCTTATATTCACTTTATTTA TTGTGTATAAGTTTTTCATCTAATTTGGAATTGTTATTGTCTAAGCAAGA AAGTCCTATCTTTTATGTAGTGAGTGAAATTGAGTAATGAAAtgttgaat aaaaaaagaagaagaaaaatatcttCTGTTCgatttatttttcgtttttt ttcatcCCATCATCTCCCTCTTACCCCTTACGTTTTGTGAAAAATCCTCG AGGCCTACGGGCTTAAAGGACAAACTATAtagttttttgatttgattcta cAATAATTTCTCGTCTCTTATCCATCCATGCACATGAATAATTTACTGAT CGCTCGCTACTTAATAATGCTGCGGTTACTCCTCAAAGAATGAAGAatgc tttttttttcaaagataaagTCTTCGCTTCGGAATCAGTTCAATCTTTTA CTTCATAAATAAATCACAAGTTTACTAAGGGATCTTGGCAAGAACTTTTT TTTCCATTCTATATACTGTGTATCTTTTTAAACACGGTGATTGAACTCAT ACATGAATTGTTTATGTCAAAGTGCAGGTCGtcataaaaaagatttcaaa tgagaatgaaataatattaaaaaagaaaagaaaaaaggaatttcTTTTGA GATGTGGATGAAACAGCCTTCTTCCTCATGTTGATATGTAACAGCTAGCC ACTGTTGAGTTTTTTATATATGTGAAAAGTGTTCGAAAAAAGCAGGTTTA TACTCCTGTAGTTACACTACCATTAATTCTTCTATTATATTGGTTGCTTT TTGTGAGTTTGAGGAGTTTTTGTCTGTTTCTTTTTTAAACTCTTTATTTG GCATACCAGTTCTGCTCTATTTTTACTTACATATCACAGTGGTGAGCTGC TTGGACAAAAAAATAGATTGTTATTGCTTTAGGTGAATGTAGTGTGGTTT GTTTCTTTACTTGTatggaaagttgaaaataaatagCGATGTGTTTTCTT GGTTTTCTATGACGAAAATATTGCACCAAAAAAAGAGATTACTTGGTGGT GTTGTGGTGACTTGAGAATGTCAACATCATCCAAACATTATCGTAGTGCT TACATAGACAATGTTAATAGTCATTGCACATGTCGTGTTGATAAGAAAAC ACAAACGTATCCTCTCAAGAAACATAGCTGGTCACATCGCTTGTTGAGCT CCTTCAGAAGGCGCCGATCCGCCTCTTCTCTACACCACGAAGTAGAATCT TTCGTTGAAAAGGTATTAAAGAGTAGATTGTATTTTAATGTCCATTATGC TACTTAGTGGATCGTCATAATTATGTTCTCTATATTAGTTTGAATAAAAA CCACGAATTGTTAACTCCATAATTAAGGTTTTATGACATTTTGGTTGGCT ATCTTGATTGAAAATAATCTTTCtatataaaattttcataattatgaCAC TCCTCGTCTCACCCATGAAACAATACTAAACTAACTATTTGTtcaaagta gtcatttcaagaATACAGTGTAGGTTTAAACCCAGAAGCTTAATTTATAT CATAATACTGGAAGTGTTAATGATAATAAAAATGTTGTGCCAAGCCGTTT CGACACAATATCTAAATAATGTATGCCTTCAAATTGTTAATCACACaatc aatcaaatatttttatgttgTAACTGAATATTAAGGTCACCCTTTTAATT TGATTCTAAGTCTCGTTCTATTTTTCTCCTTCACACTTTTTCAGGAGGTT ATATAATGCGCCATTTTCTTTCagactttttgagattttttcacgCGACA GGTGTATGTAAGGGCTTGAACAAGAACATGAAATGAGGTCTTCCTTCTTA TCTAGACCTTTCTTTTCATTGCTCCCCGTTTTTTCATCGAATGATTTTCA TTCTAATGAAGCATATTCTTGGttcaaaaaaagacatttttcccattttt cacaattttttttcattttcttctttatatTATACGCTTCTTCTatcttt tttatggaaaatacaaaaaaaggaaTATTAAGTTACAACACTATGAAAAA TCGCGTAATGTAGCTCCAACGCCTGCTCAACAAAAAAATctagtttgttt ttcttcttcttgctTGTCGTATGTGTATTGAACTTAGAATGAGGATAATT TTCCAAGCAAACAGCActtttcattaaatgtaaaaGAAGGAAACTTAGAG AGACTTTAGTCACTGGGTCACTGGCATAACACATAATGTCTTTGAGAAGA CCACTTCTTTTTCATCACAGATCTGAGGGTGTCCCTAGAATCTACGAAAA TGATTTTGCTCTGGAAAAGGTAAGATGTGACTGATAAACTACAAAGAATC AGATTGTCTCTCTTTCTTTTTACTTGAGAAGCTTTGCTCCCACTATATTG TTTATGGTTTTGttataattttggaaaattgaagaaGCCATTCAACAAGT CTATGAAGTTGATATTTTCATATTGTCTttagttcttcttcttcttcttc aatgtTCTTGtgtttaattttcttctcgtttctttcgggggaaaatgaaa aatatttagtcACTCATATATTGGAAGTGAAAAAAAGTATCAAGAGTGTG AAGGAATCACCTGCAGAAAATATTGTTGGCtttgcttcttcttcttcttc tttcctTGGTTAAGTTTTAAACATCTGCTGACTACAAAAAAGGActgctt tttttttcttattcttgCTTCTTCTATATATTGTTTCTTCATCTCTTCTA CTACTGCTGATTGAAAGTTCATCAATTCTCCTCCTTTTTTTCTCTTCCAC CTTCAAACCCCTTCAATATTCACAAAAAGGtcatttcaaaaagaaattat tttcaaacccctttttgttttgttgtaatGTACTCAATAATCGACTTGAT GGTcagcttttttcatttttgtaaggTTGCATTGCATGGCAATTTATCAT GTAACGAGAAATCTATACCACAATTAAAAAGGATATTTATATACGCTTCT CTTAAACAAGCCGCAAAATCAGTCAGATGAAGCATCCTTTATTTTATCTT GTTGTTTCAAAACCAGCACACTTAAATGTTTTGGAAAAAGTACATATGTT GTTTATTATTGGAACTGTCAGAACGAAAGAAAAAGAAGGTCCttcatttc aaaattccttTATTCCTTATCCCTGGCTTCTTCCCATCTTAAAATAGCAA GTCTCTTCCACCGTTCCTTAAAGTATTGCCGGCAACCGACATTTACATAA CCTTTTACTATTTTCCCACAAAAATTTCCTCTTCTTTTCAACaatgaaat tttaatttcatgTACAACCATTAAAAACCCCTTATACtaatttctctttt caaaaGATTCTTATAAATTTCTTGCAGTTATATATTACAAATGTATTACA ATTATATGTTACAAATCTATTACATTTTGTATTCTAGTAATACTTGCAGC AAAAACACGTTGAAAAATATCATGCTTTGTCAAAATTACCAGATAATCTC GAATAACAAATCATCCAATtgtatttcttcttctttttctgcaGAAAATT TCGATGTCATCCATGGACCTGACTATCCTTGGAGAAGCACATGGCATGAT TACAGACCTGCTAGCTGACACCAGTCTTCCGTTGAACGTCACCGGTACTT TACGTATTGTGGCTGATATGATCTCACCTCTTCTTCAGCATAGTTTACAT CGACAAGGTGCACCATTGTTGACTGTACTGGAGAAGACGAAAAACAATGA GGATCATGAGCAAGTTCAAAACCAACCAGATCTGAAGGATGACACTCCAC TCTCACTGAAACAGGTACCAGAATGTTAAAGCAGCATTTATCAACCTTAA CGCTGCGCTAATGGTCACTTGCCGGTGTCTGGGCTCGATAGCAATGAGTC AgctttcattttctaaattccCATCATTTCAAAAACTGAGTATAAATTGA CAGAGAGTCAAACCCAGTTTCACAAGCTGAGGGGTAATCTATAGGCTGCC TATGAAATAATGTCCTGAGATTTCGTAAACTTATTTATGGCCTTTCATTG TACGAGTTACCGAAAAATGACTTGATTTTTAAAGGACCACATACATATTC CCATACCATACTCTAAAAGCCTATTGGATGTAACAGACTTACCACtcact tattcactttgtatTTAGCGGCTGCAACGTAATTTAGGCGTCAGCTCACG TAGGATGTCATCAAGTTACACGACGACTACATCTGCAACAGGAATGCCAA CCATAGATATGGAGTATCACCACAAGAAATCTAACGCTAACAAAACAAGT GCAAATAGTACTTCTTCACCGACTGCCATCAAAAAGACTTCTAGTAGATC TAAATCGTACGCGGGTGCGTTAACACCTGCAGAAAGATCCAATCTTTTGA AATCACACTCGCGTTCTTTTTCACAATCCACTAGTCCAACGCAGAGCGGT CTGCTTAGGAAAGAGTTAGCCACATCAGATGACACCATTTTTAAAGTGGA AATCGAACGCGGGAAACCGGTCTTCTTTGAAGGAATGGATGCTTCAGAAT CTGAGAACGAAACCATTGAATCGGCAGATGAGGACACGGTCAAAGATATC ATCTCCTTGAGCGGATGTACATCGTccaataataataacaacaatatTAA CAACAGGACTAAATTTGTATTAGATGAACGTTTAGAAGATGTCAAAGAGA CTCCCGAAAAAGAACCAGTAGATACTCAACCTCATAAAACTCCTTTAGAA ACTGTTGAAAATGTCGAAGATACGATAAACGAAACGGCGTCGGTTGAACC ACCGTCAACGTTAAGCACCGTAGAAGATAACGTCGAAGATGTTACGTCAG AAAGCGTAACCACGGAAGCGACAGAAACGACACCCCCTAAACGAAGCTTA CGTAAAGTTAGTGATACGAGCCGTACCTTACGTAGTAACTCAACAGGAAG CGTTAAAAATGAACTTAAGTCCAGTGATTCTAGTGATAATCTCGTCATTC CAGCGTCCAATCTGATGCGTCGAAAATCGTCACGTGAGCTACACATGGAG TATGAGATCGCCATATCCAGAGATATTGATGATATGTTAAGCAAAGTCAA GGAGTGGGATTTCCCAATCTTCGAACTCAGTGAAAAATGCAACGTTTTAA CACAAGTAGGTGTACTTCTTCTTTTCTGTATTATCTTTCACGATTTTAAA AGCGTCTACAATCCTTAAACTTGTTTTTTAGGATTAGTGTGATTTAAATG CGTCAGTCTGATAACATTAAGGTTAGCCAGAAACTCGAGCAAAAGTTGGA CAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070215TCONS_00070215Clytia hemisphaericatranscript
TCONS_00070216TCONS_00070216Clytia hemisphaericatranscript
TCONS_00070217TCONS_00070217Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070215-proteinTCONS_00070215-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_516supercontigscaffold_516:274536..285539 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
21.96 19.75 7.45 3.94 30.79 24.24 50.34 55.06 33.67 38.8 27.61 26.89 53.77 56.47 16.95 21.08 37.49 37.99 57.22 53.37 42 44.43 43.32 43.96 39.36 44.23 8.08 6.73 30.6 35.27