XLOC_043539 (gene) - C. hemisphaerica

Overview
NameXLOC_043539
Unique NameXLOC_043539
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_511:592913..597190+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043539 ID=XLOC_043539|Name=XLOC_043539|organism=Clytia hemisphaerica|type=gene|length=4278bp|location=Sequence derived from alignment at scaffold_511:592913..597190+ (Clytia hemisphaerica)
TACCAGGTGAAACATCTACACCTTCTTCTTTTTGCTTTCGTTTCTGTTCG
TGCTGTTCTTTCATTTCGACAGCTTCACGATAAATCGAATGATGATCACC
AAGCCGTTGCAAAGATATCTCTTCTACTTCAGTCAAGTGATCCATtgctt
cttcaatctttttcataCCAAACAAGCAGTGTGCCAAATTGATTCTGATG
GAGAGAATAATTGGATGTTCTTTATCCAACACCTGTAAGCCATCTTCAAG
TGTTTGTGATAAAGTATCATGGGCTTTATTGGAAAGTCCTTTTTCTGCCA
AACAACGCCCGATAACGCTTGTCGTTTGTAAAACTTCCGGATGGGATTTG
TCGAatgtttcgatctgttttgttTGAGTTGATTCAAGAATTTTCAATGC
ATCATTAAAACGTCCTTTCATTGTCAGAACATGACCGATGTGGAAATCGT
TTCTCAAGTATCGATCGTGATGGTCACCAAAAACTTCTGACAATATCGGT
TTGGATGATTCGAAAATTTGTAACGCTTCGTCGAATGCTTTCATTCTCTT
CAAACATTCTCCGATATAGATTTTGCCAATCAAGTAATCCCTGTGTCTCT
ggcctattgttttattatcaattatttCGATTTCTTTGAAGATACTTAAT
GCGTCCTCGAAATGAGACAGATTCATTAGACATTGTCCGATTTTGTGCTT
TGTGGTGAGGTAATCGTTGTCCTTTCGAACGGTTTCGATTTCTTTAAATA
TACGTAATGCTTCATGGTAGTGGGATAAATTCTCTAAACATTGTCCAATG
GCATGCTTCGTGATGAGGTAACTGTTGTGACGTTCACCGAGAGTGTCCTT
TTGAACGGTTTCGATTTCTTTAAATATACGTAATGCGTCATGGTAATGAG
ATAAATTCTTTAAACATTGTCCGATCTCATGCTTCGTGGAGAGGTAACGG
TTGTGACGTTCACCGAGAGTGTCCTTTTCAACGGTTTCGATTTCTTTAAA
TATACGTAATGCCTCATGGTAGTGAGATAAATTCATTAAACAGTTTCCAA
TGGCATGCTTCGTGATGAGGTAACTGTTGTGACGTTCACCAAGAGTGTCC
TTTTGAACGCTTTCGGTTTCTTTAAATATACGTAATGCGTCATGGTAGTG
AGATAAATTCATTAAACAGTTTCCAATGGCATGCTTCGTGGAGAGGTAAC
TGTTGTGACGTTCACCGAGAGTGTCCTTTTCAACGGTTTCGATTTCTTTA
AATATACGTAATGCGTCATGGTAGTGAGATAAATTCATTAAACAGTTTCC
AATGGCATGCTTCGTGGAGAGGTAACTGTTGTGACGTTCACCGAGAGTGT
CCTTTTCAACGGTTTCGATTTCTTTAAATATACGTAATGCGTcttgattt
tgagataaattctCTAAACATTGTCCAATGGCATGCTTCGTGATGAGGTA
ACTGTTGTGACGTTCACCGAGAGTGTCCTTTCGAACGGTTTCGATTTCTT
CAAATATACGTAATGCGTCATGGTAATGAGATAAATTCTTTAAACATTGT
CCGATCTCATGCTTCGTGATGAGGTAACTGTTGTGACGTTCACCGAGAGT
GTCCTTTTTAACGGTTTCGATTTCTTTAAATATACGTAATGCGTCATGGT
AATGAGATAAATTCTTTAAACATTGTCCAATGGCATGCTTCGTGGAGAGG
TAATGGTTGTGACGTTCACCGAGAGTGTCCTTTCGAACGGTTTCGATTTC
TTTAAATATACGTAATGCTTCATGATAATGAGATAAATTCATGAAACAGT
GTCCAATGGCATGCTTCGTGGAGAGGTAACGGTTGTGACGTTCACCGAGA
GTGTCCTTTTCAACGGTTTCGATTTCTTTAAATATACGTAATGCTTCATG
ATAATGAGATAAATTCTCTAAACATTGTCCGATCTCATGCTTCGTGGAGA
GGTAATGGTTGTGACGTTCACCGAGAGTGTCCTTTTGAACGGTTTCGATT
TCTTTAAATATACGTAATGCTTCATGATAATGAGATAAATTCTTTAAACA
GTGTCCAATGGCATGCTTCGTGATGAGGTAACTGTTGTGACGTTCGCCGA
GAGTGTCCTTTTCAACGGTTTCGATTTCTTTAAATATACGTAATGCTTCA
TGATAATGAGATAAATTCTCTAAACATTGTCCAATGGCATGCTTCGTGGA
GAGGTAATGGTTGTGACGTTCACCGAGAGTGTCCTTTTGAACGGTTTCGA
TTTCTTTAAATATACGTAATGCTTCATGATAATGAGATAAATTCATTAAA
CAGTGTCCAATGGCATGCTTCGTGATGAGGTAACTGTTGTGACGTTCACC
GAGAGTGTCCTTTTCAACGGTTTCGATTTCTTTAAATATACGTAATGCGT
CATGGTAATGAGAAAGGTTATTTAAAGTGTTTGCATAATTATATTTAGTT
TTAAAATACAAGTCTTTTCTCTCATAACCATCTGTATGTGAAAGTTTTTc
catcatttttttcaagtaGTTGGAAAGTCTTCTCATATGTCCTTGTGTTT
CAAAAAGATGAATCAAATCATTCTGTACATCAATCAATTTCataagaaag
atattttcaacatctttttcaCAGATGAAAAGAAAATGCTGGTACCAGTA
TTTGCCatccatttttttttcttgacttCTGCAATTTCTCATGTCTTCAA
TAAAGGTATTTGCTAGCTCTTGATAGACTGGTTCTTTGACATTTGGAACG
TAAGTTTTGAGAAAGGTTTGAGTTAGTTCGTGACAATTTATTTGGTTTTC
TAGAAAGCATGTACCTGTGTTCGTGGTTTCAATGATTGAGTACTTGGCCA
ATAAAGATAATATCTTATTTAGAACAAATACATCATCAACAAATTTGATC
AGTAATCCTTTCCTGATGACTTTTCCATCCAAGTAGGAGATTTTGTTTAG
AAGATCATTAACTTTTTGACCACCTTCCTGTAATAATCTATTATAGGTCA
AAGACAAAGTAGTATAAACTGAAGGGTTTCCGATTTCTTGGGTTCCCTCT
GAAAGAAgttctttttgtcttttatcGAATATGGTTAGGTACATTTCAAC
AGTTAGTCCATTCTTATTAATAAATGAAAACGCCTGCTGTAGAGCAAGGG
GTAGATAGCTGAGAGATTTTAGAAGTTTTTGGTTTGCTTCTTTATCTTTG
CGTGCGTCTACATCGTGGATATTTCTCTCTAAGAACTGTTCAGCCTCTTT
GCTAGAAAATTGTTTTATCTTGATAACATCGAATCGTTGATCCCATTCAC
CGCATTGTGAGGTGATGAGAAAATATGGTGCTTCCTTTTTGGTGTCAGGA
ATCAAATCGACCAAAGCAGCCTGATTGATGACATTGTCTAGGACAAACAA
TACTTTACGGGGTTTATTCACATCCTGTCTTACTGAGAAGTAATCGTAAA
CAAGATTTGAGATCTCTTTCAATGGTTTGGCTGACCCATTTTGATTATAG
ATCTGATTAATGCCACATCGGTTGGCGATCTCGGTGAATGATTTTTCGAT
GTTGACCAAGCTGTTACAGTTAATCCAACAAACGATATCCTCGTAATAAA
CATTACGATAGGATTGCCAATACTCGCGAGCAGTTTCTGACTTTCCACTG
CCCCCAATCCCACTGATGACAACAGAGAATTTGAAGTCATCGTGGTGTTG
ACGGTAAACTGCTTGGTGAATATTGCTGATCAGGTTTGCTCTTCTGAAGT
GGTTGGCAACTGGCGGTAGACAGGCATAATTGAAAGAAGTCTTGGTCATC
AGTTTTTTCACTTTAGAACCAGCAATCCATATATTACATATGTCATCAAA
TTCAGCCTTGGATAGCCCTAGCTGTAATAAGGGTGGTTCTGCATCACTTA
GTATGGCATTGAATTCCGGTAGACTGACTTTGGTACCACCATGTTGGATC
CTATTCCTGATTTTTATCAAATCTTTCATATTTTCTCCGAAGAACTCTCT
AGTTACAAAAAAGAGGAGTGTACTGTCAAACTGGTCAAGGTAGACCATTC
CAGAAGTTGGAAGGAGTAATTTGTATTGCTCATCTTTGATGACATTTTTT
CTCCTCAGTTTATCGATTGTAGCTTTATGTGATAGAAAGAATTGAAATAC
TTTTGCTGGATCTCGTGTGTTCAGTTTTTTGTGTATTCTCTCTCGCAGCT
GGTTGTCTAATTTGCCAAGGAGAACCTGGCAACGAAACCCTCTTTCTTGG
TCCTCGTCAGTATGTGACTGTGTACTCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069934TCONS_00069934Clytia hemisphaericatranscript
TCONS_00069935TCONS_00069935Clytia hemisphaericatranscript
TCONS_00069936TCONS_00069936Clytia hemisphaericatranscript
TCONS_00069937TCONS_00069937Clytia hemisphaericatranscript
TCONS_00069938TCONS_00069938Clytia hemisphaericatranscript
TCONS_00069939TCONS_00069939Clytia hemisphaericatranscript
TCONS_00069940TCONS_00069940Clytia hemisphaericatranscript
TCONS_00069941TCONS_00069941Clytia hemisphaericatranscript
TCONS_00069942TCONS_00069942Clytia hemisphaericatranscript
TCONS_00069943TCONS_00069943Clytia hemisphaericatranscript
TCONS_00069944TCONS_00069944Clytia hemisphaericatranscript
TCONS_00069945TCONS_00069945Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_511supercontigscaffold_511:592913..597190 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.56	1.62	0.48	0.2	13.42	10	10.04	11.8	5.4	6.32	6.79	6.38	6.34	5.57	3.73	6.55	4.22	4.69	4	5.85	7.26	6.11	2.51	3.88	16.09	12.95	7.51	5.95	5.53	5.4