XLOC_043384 (gene) - C. hemisphaerica

Overview


Name	XLOC_043384
Unique Name	XLOC_043384
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_505:76005..85597+

gene from alignment at scaffold_505:76005..85597+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_043384 ID=XLOC_043384|Name=XLOC_043384|organism=Clytia hemisphaerica|type=gene|length=9593bp|location=Sequence derived from alignment at scaffold_505:76005..85597+ (Clytia hemisphaerica)
TTTCGTTGATGATTCGCCTCTCGCGTTTTGAAGTGAAAAGCTCGTTTTAA
CCTCGGGAACCAAAATGGAAAACTCAGAAAGTTCTAATTATTCAAGTAAT
TCTAGTCAACCTCTGTTGGTCAGCACTGTATTGTCTACAAATGTTTTGCA
TGCAAAAATTGGAAGTAATTCTACACCTAAAGATAAGCTAAGAAGATGCA
AAAAATGTCGAAAGACTTTCAAAAACCATGGCACCTATTTGAGCCATGTA
CGTTTTCACAAGAACAATCTGAAGCTCAAGAACAGGTATGGTTCAAAGAA
TAAGAGTGATGTTTTCCAACAGCAGGAGTTTCAATGCAAAACATGCAATG
CAACATGCACTGGAATCCCTGCATTTCTTGATCACATGAAGAGACACTCT
GACCAGCAGATGGATGTCACCTCATACATTGCAGATGATGGAAGAAATCA
ACTACAGAATGAAGAAGTCAACATCAGTGGTGAGACTTTATTTCTTTTCC
ACTAGTTTTGTAAGCTAGGCTAGGGCTTTGGATTTATCCCCACATGTAGA
TATTNGCTAGTTTTGTAGGCTAGGGATTTGGATTTATCCCCACATGTAGA
TATTTTTCATGGCAttataatttgttttgattaagGATTTTTCTAATCGT
CAGTCGATGTAATGGCACAAACGACCACCCATATGATATGGCCCAAAATT
TTCGAGCTCTACTCGGTGAAATATTGAACTTGAAAAGTCTGGAAAATCTC
AGGTCATGTTCGGGCATGTTCGTGGAAAGTTTTTGaatggaaaatccaaa
attttgtgGCCCAATCAATGTTGGGATTAAAAGAATGTTTTCAAACATGA
CCCAAAAATGATTCGGCTATGTTCCAAAGTGCGATTATCTCTGTTCAAAA
GAATTTAAGTCGCACACGTAATCAATGATTTGATTGGTAGAAAAATCTAG
AGAATCTCAATGATCCTAACTAATGCTAGTTTGCAGAGTATATATATGGT
AAAAATCATCAAGATCTCAGGGACAGAGTGTGCTCCATTTTCAAGGACAG
AGTGTGCTCCATTTTCAAGGACAGgcaatttttgaataattttctaGTCT
CAAGGGTAAAATCACTGaccagttgggtgtttaagataaaaatggcAATT
ATTGCTTTTTCGGCAATTGTTGCCAAAAACGGCAACTTTTTCAACGATAA
ATTgttgaatcagcagaaaaataaaaaaagtaaataatgaaaattgccgt
tttcttGTCATTTATTGCTGCTTTTGAAAAGAAGAGtagattttattatt
gaacacatggtatttgacaccctcgtgataagtaggcccactgtgcctcg
tttagttttgttttcaactggtttttgttggaaatgcagatagcaaaatc
aagtcatatgtaaacaaNcctcgtttagttttgttttcaactggtttttg
ttggaaatgcagatagcaaaatcaagtcatatgtaaacaaacttacaaCA
GGGGTTTTGAAATCCTTTTCTGGCTTGTGTTTCGGcttcgatgcaggatc
tttttacatattattttagaacttttcatgttattgagcaacaaaaaatt
gaaaaaatcacttttaaaaatcagaccTGCCAATGCTCACGGTTTACTCG
TGAGGCTCACGGTTTTCGACCAAATCTCAAGGTCTCACGAGTGCCCTCGA
AAACCTCACGGTTTTTCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTCTCACGCTTACGATTTTATCCCCCTTATATTTCTTTTG
ATGAAAGAAAAGAatcggaattttttttcaatgtaaacaaatatggcgga
ATCCGAACCAAGCAAGAAGAAGTCCAGAACTCATTATCGAACGAAATATA
ATCTTGTTTGGGCAGAAGACCATCCCATTAGAGCAGTAGCTGGAGATCCT
TATAAGTATTATTGTATTCCTTGTTGCAAGAAGTTATCCTGTGATCATCA
AGGATTGACAGATGTCACTAACCACTGCAACACCAAAACTCATAAAGATG
AagttaaaaagtcaaaaacccAGCCATCTCTTGATTCATTCATGAAGAAA
AAAGAGACAAACCTtgacaaaaaagttttgaatgcAGAAGTTATGGTAAC
AAACTTTTTTGTGCAACACAATATTTCGCTTTCCACAGCAGACCACTTTA
CAGGACTTGTTAAGACTGTATTTGATGATAGTAAAGTAGCAAAACAGTAT
CAATCACGAAGAACAAAGACTTCATCAATTATCAATCAAGCTTTCAAGCC
GCATTGTATTAACTATGCTGTGGAACACTGCAAATCTCATCCGTATTCTG
TTGGTACAGATGGTTCCAATGACACTGGTGTTGACAAGATGAATCCAgtt
tgcatcaaaatctttgatatTGAGAGATCAAAAACTGTTACTGACCATTT
CTTAGATATGTGCTTAACATCTGGCGAAGGAGGAGGAACTGCTgctgtaa
tttttgaaaagattgaaGAAGTTTTTGAACAACATAAGCTACCTTGGGAG
AATTGCACAAGCTTGAGTGTTGATAATACAAACACTATGATTGGGAAACG
CAATTCTATTGCTTCgagatttcttaaaaaaaatgaaaattgtttcATTG
CTGGGTGCCCTTGCCATCTTGCCCATATAGCTGCTAGTAATTCTCGTGAT
GAGTTTAGTTCATACATTGGACTCAATGTGGAAGATGTGATGGTAGATCT
TTATTATTGGTTTGATAAGAGTGCAAAAAGGAAAGGAGTACTTAcaacat
attttgagttttgtgaTCAGGAATACTTAGCTGTATTAAAGCACTTATCA
GTCAGATGGTTATCACTAGAGAGATGTGTTACAAGGGCACTAAAGAAATT
CCCAAGTTTAAAGTCTTATTTCCTAAGTGAGTCTTTTACTGACGATCGAT
TCCAAAGGCTTGAAGATAAATTCACAAACTTATTATTGGAACCATGCATG
CTCTTTTTGAGCTCATCAATACCTATTTTTACACATTTCAACTTACTTTT
ACAAAGAGAAGAACCAACTATTCACCTTCTTAAGTCAGCTATGGAGAGTC
TTGGGAAAAAACTAGCCAAACGTATTATGTTTCCAGAGAAGATAAAGGAT
GTTGAGGGTATATCTAGCATTGACTTGAATGATTCAGAGAATTTCAAGCC
CACGAGTGAAATATATTTAGGTGTAATTACTAAACAAATGTTGAGAAACT
TTCTTAATGAAGGGGATATTACAGAAAAAGAGTTCAACGACTTTCATGAT
GCTGCCCATTATTTCTTCAAATCTGGTCTTGAATATGTCTTAAAGAAATT
TCCACTTGATGATCCACTTATTTGTAATTCTGTTTGGGTCAATGTTCTTG
ATAGGCTCAATTGTAAATGGGAAAATGTCCAATATTTCTATGATTTATTC
CCAAATCTAATGGCTAATGTTTCTGCAGACGACCTTTATGAGGAATTTCT
TGACTATCAAACTCTTTCTGACAGCGATTTCGTTGATAAGGCTTGGGAGG
ATGCTAAAGTATTAGAGGGtttgaaagatgaaaatgacAATCCTCTTTTC
CATTATCGTGTTGATGTTTTATGGCATTACATTGCTAAGATGTGTGTCGC
TGGATCGTCCTCAAGGCGCTTCAAATTGTTGCCAAAGGTTGCAGAAATCG
TACTAATAATTCCACACAGTAACGCTGGGCTTGAAAGGTTGTTTAGCATC
GTCAAGAAGAACAAATGTTTAGATCGCTCATCAATGAAATTAGATGGTAC
TCTATCAAGTATTTTAGCCATGAAAACAATGTATCCTGAGTTGACTGTAC
CATGCCACCAATGGAAACCCACAGATGAGCTTCTGACAGCAGCCAAAAAA
GCGACTGTGACCTATAACAAAGAACACAGTAAACAAACTTAAATTACAAA
ACTCTGATTGAAGAAAGagtagattttgaaaattttacgcactttttgtt
atgtttataatgctttttcatacaaaaaactTATTTATAAAACACTCAGT
CTGATTTATAAActagttttgtttatattttacctagttttgtttatatt
ttaccTAGTGCTCTTTTgtctaaaacagaaaaaaatcaaaaacgaaaatC
TCACGGTTTTTGCCTGAATCTCAAGGTTTTctgaggaaaaaaataaaagt
ctcAAGGTTTTGGCCTTTCACAGGTTGGCAGGtctgaaaaatccaaaaaa
cctttttctcaatGCAATTTTACAAACACCTCTTcaacatctttgccctt
aataAGGACATTTTCTGTCTAAAATTGGCCACATGACCACAATGTCATTG
ATTTGCAAAACCGGACTTCTGGGCTCCATCTCTTGTTGGGTTGAAACTAT
AATAAAAAGACTATCCCTGTTTGATTTTAATGTATATATgtcattatttt
atttatttagatcaAACCATAGAACTTAGTCAGGCATTAAGTGACCAAAA
CGCTCAACTTTCCAATGAAGAACTGCAACAAATATCAGCCCTCCAACAAC
AAAGCAATGCTCAACAAATGGTTTTCCCTCAGGGAAATGCAGGGCTCCAT
ATTGAAATCCCATCTCATATCAAAACATTGAGCTTTAACAACAGCAATAA
CAGTAACTCAAATACTGCACAAATAACTCAACTCAGTAAGTTAGCCactt
tctttggttttctaATAATATAAAGTATTAAATTATATCACTGAGTTTTA
AGGTCATTCCTTTCTATGTTAGCTTCTTACCAGTAGTGATCACTCGTTAC
CAAATAATTACAACTCTTGagataaaattttgataaatttattcccATAT
TGCAGATACGTTGATGAAGTCAATTGAATCACTCCATTCAAAGATAGATG
TGGTGATCAAACATTTGAACATTCCTTTGGATGCTGAAGGGAACCCTCTA
CCCCCTGCCACTGAATTGCCAGCAGCCACACAGACCATTGAAGTCAATCC
ACAATCGAATGTCACCGATGCAAATCCATCGGAACAAAAGAACTCGCCTG
GTATGTTTCAgttcgttgtttttttttcgtttcacATAATATGAAGAAGT
CATGAACGGTGCTCAAAACTTTTCCTCTAATAAAAGATCTAAAATCatat
taattcattttttcaaagaataggGACCCGTTTACACGATACATAGTGCT
TTGTCCCTACACATATAGATCCTTTCATAGATGATGTCACGAATATTGTC
TGTTGTTTAGTGCATCTCTGTGTCTCCGATCATTCTATGATGAAGAAAAT
GGACCTCTCAATATTTTCTAAGAGTCTTCTATAAATCCTAGGCATTCGCT
GTTCGTGATATTATGgtttatgaaaatttctattcTATGTTATCGTGTAT
TTTTTAGAGCTTTTTCATTATGTTGTATGTATTTCACTGTTCTTCTATTA
GACACCTCTCAGCAACATGAGCAACAAAAGACGGACCTTGGTGAAGAAAC
GGAAGGGGAAACAGCCGTTCTGTTGGAAGGCTTCCCTCCGTCTTATTCTC
TCGTACAAGCAGCCaaagaacaacaacaacaagagtTCTACGCTTTGACA
CTTTCTGGTCGTAATCCTCAACAACTTACCCAAGCTACATCAAACGATCT
CAAAATGCTGAAAGGAAAAACAGGCGGATGTGGGTGTAATTTGTCATTAA
CTTTGCTCATCTTTAAGTGTATCTACCTTTCTAGGGGTAAAATTTCGTTG
CATTTGgagaattttgacaaaatatttaaaaagtaaaTACGTTATTCGAA
AAAGTAGTTATTTTTAAGGAAGTCGATTCCATTTTCTGCACGATCTGTTG
GTGCTGAGGTGAgcctagcctgttagacgaaaaccgcttttttatcgcga
tttaacaaagaaaaaatttggtttgttggAAGGCACTGGCTGAGGTGAGC
CTTACCACTTAATAAGATATTGCGTACAATGGCTTAggtctttttcatgt
tttcttttaGCAGTTGATTTCTGGGTACCCAGTACCAATCAGCATTACAT
TCTTGCGGAAGCACAAACAGACGAAGATACAGACGAGCTCACTATTCCAT
TGGCTGATACACCTTCTACCAGCAGTTCAACCAATCACTCGCTTTCTCCA
CCAATTCCAGCCTCTGTTATCGAGAAAGTTTTCATTGAAAGTCGATCGCG
TGCTAACTTCGCCAAAAATCTAACTTTCGCTATTTACTCCAAAGAGGAAC
GCTACAATCGAAACTGCACCGGTCGCGTTTTCGGGCGCGCGCAAAATAAA
CAACAGCTGGATCCTGAAAAATTAGCGGCGGTCAAGGAAGCCACTTTCAA
TAAATACCCATGTGGTCCGAACCTCGTTGACATAACATGGCGCAAAGAGT
GTATCACGGCAATCGATTCTGGTCTGCGAAATGAACATCGAGCTTCTCTC
AAAGGAGGTAACACTCTAGTGCACGGACAAGAGCCTGGAACGAATAATGT
GTTAGCAACGAACGCGCATCACATTGAAGAACAAAACCAAGTGACTCAAC
AAACACATCACCAAATGGTCGCTAATTATCCGTTGAGTCAGCAACAACAC
ACTCCTCAACCACAGCAACACGTTGTTCAACAGGATACGCAACAAGCACa
acaaattgaaattgaaagtaaaatggAAGGGATTCTAGCGGAATGAACCG
TATTAAAAGGATGAATATAAATATTGGTTGAATCGATTATTATATTCTGG
ATTAGATTTTGTGTTTATATTTCATTAGTAGTTGTCCTTTATAGAAGGCC
CCTTTTTACCTAGTGTTGTGCTCGTCGAGTTTCAagaccgaagggctaga
ggcgagactcctggatgggaaatgaaaccacttctTTCCCATCCGGAACG
CCCGCTAGTAGTTTTACACAaatgccggattgaaactatcgctagatttc
aaaaaatgtagtcttcaaaaacaaaggtaCCCccagatacaatccgtcgt
cgtgattacggcgcgttctatgcgcgttttggatgggaaataagtggctt
caatttttcttgcctgaaaagggttaaagttttgcctctagcccttcggt
ctTGAAACTCAATAGTTGTGCTTACTGTTTCAAAAAACAACGTTTCGCTA
GAATTTCAATACAATGGGCTTTTTCATAGATAAATGAATATGGGGAGACT
GGAAATTGACACCCAGGACATAAGGTCTAACACCCTCCCCCCTACCTAGA
ACAAGCATCATTCGAAATTTCTCCTAGACAGCAAAATTACCCCAAAACAG
AACATGTTAAGTcctaggctgcatgcatccccaaattagttttgatatag
ctatatcaaaacttatcagaggggatgtgtgcagcctagtTTAGTCCGGA
CAATAATATATCCTCCCCCCTATATACGAACACTTTCTGTAAGAGCCCAA
TACACTGAAAATAACCTAATTTAAAACGGAGTcctacaaaaactttttta
taaaatgttgAACGATATTTATTAGGTTCTCAGAGTGAAGCTTATTCACC
ACAAAAATTGGTAACAGGGTGTTGTTTTTGTCATGGGCGAAATTGCAATG
ATTCCCGCGGGTTAAaagatttcctgattttttttcttcatatttattta
tgttttttaagGTGATTGTAAATAGATTAGCGATTGGCATTTTCTATCGT
TTGAATTAAATCTGTAGAACTGTAGGATATGAACATAGATATAAAGAGGA
ATAAGTTTCATTGACTTCGCAGATCCTTCTACTTCGTACCTCA

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00069675	TCONS_00069675	Clytia hemisphaerica	transcript
TCONS_00069676	TCONS_00069676	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00069676-protein	TCONS_00069676-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_505	supercontig	scaffold_505:76005..85597 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.62	10.21	5.24	4.16	26.53	19.77	22.87	23.93	10.95	14.34	16.25	10.22	14.71	19.08	12.22	15.99	14.48	16.39	13.36	10.27	14.33	12.96	14.77	15.56	21.25	19.33	5.96	5.69	8.08	10.72

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XLOC_043384 (gene) - C. hemisphaerica