XLOC_043183 (gene) - C. hemisphaerica

Overview
NameXLOC_043183
Unique NameXLOC_043183
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_496:417178..420639-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043183 ID=XLOC_043183|Name=XLOC_043183|organism=Clytia hemisphaerica|type=gene|length=3462bp|location=Sequence derived from alignment at scaffold_496:417178..420639- (Clytia hemisphaerica)
TCGTCTTTCAAAACCAGCAAAAGAATTCAAATGGTTTGTAAACAATGTGG
AAATCACACCTGAGAGCGAAAAATTCATCTTATCTGAAGATGATGGCCTT
TATTCTTTGACATTCAAGAACTGTACTATGGACGACGATAAAAAAGCAGT
CAAATACGCTGCAACATGTTTTAAGAAGCAACTTACGGATTCTACTCGTA
TGAAAGTTAAACCAGCAACTCCGGAGCTGATTTGCACCAGCCAAATCAAA
GATCTTTACGAAGTTGGTGAAGAAGTACGAATTGACCTTGATATTAAGGG
ACACAAAGAACCTTTTACTGTAAACTTTGCGAAAGGATTCAGAAAGATCT
CAGAGCAAGAAGGAAAGGTTGAAATCAATATCGTCGAAAAACATGTGTCG
TTTATATTGAAAAACATAGATTCTACTGATGCTGGAACTTATAAATGTAC
TGTCAAAAGTTCAGTTGCAACTTCTGAACTCAAGTTCAAGCCAATCAAAG
TTAACAAAACTGCTGAGGTTGTTAAGGAAACAGTTTCATTTGAGATTGAA
GAGAAAATGAAACCAGTTGTTGCAGAATGTGGTGACAGTGCTGATTTCAA
TGTCGTCTTCAACCATGAACCTGAAAGTATTTCATGGTATATAAATGACC
AAGAAGTTAAACCATCAGATAAATACACCATCGACAAACTCGAAAAGAAA
TATTTTCTCAGATTCAATTACTGTGAAACNGCGGGCGAAACTGAATATGC
CTATCTTCCATTTTCTGTTAAAGATAAACATGAGTATGAGCAATGGTTGA
AATCTCAAGAACCAAACAAAAACGATGACAAAGAACGACAAGATGTCGAC
GCTAAACCAGAGAGTGAATCTCTTGAAGAAGGATCTGTTGAAGATGACAG
TTCAGCTATCGAAGCATCTGCCAAAGATACTGCAAACGTCTTAGAAGAAG
AAGAACCAATGCTTGAGGAAGTGATCGAGCAAGAACAAATAATTCCGGAA
GAGGTTGACGATGGAACACCATTCGTTGTCAAAGAAAAGATGAAACCAAT
TACTGCAACTTCTGATGAAAAAGCTACTCTGTGTGTTCGTCTTTCAAAGT
CAGCAAAAGAATTCAAATGGTTTGTAAACAATTTGGAAATCACACCTGAG
AGCGAAAAATTCACCTTATCTGAAGATGATGGCCTTTATTCTTTGACATT
CAAGAACTGTACTATGGACGACGATAAAAAAGCAGTCAAATACGCTGCAA
CATGTTTTAAGAAGCAACTTACGGATTCTACTCGTATGAAAGTTAAACCA
GCAACTCCGGAGCTGATTTGCACCAGCCAAATCAAAGATCTTTACGAAGT
TGGTGAAGAAGTACGGATTGACCTTGATATTAAGGGACACAAAGAACCTT
TTACTGTAAACTTTGCGAAAGGATTCAGAAAGATCTCAGAGCAAGAAGGA
AAGGTTGAAATCAATATCGTCGAAAAACATGTGTCGTTTATATTGAAAAA
CATAGATTCTACTGATGCTGGAACTTATAAATGTACTGTCAAAAGTTCAG
TTGCAACTTCTGAACTCAAGTTCAAGCCAATCAAAGTTAACAAAACTGCT
GAGGTTGTTAAGGAAACAGTTTCATTTGAGATTGAAGAGAAAATGAAACC
AGTTGTTGCAGAATGTGGTGACAGTGCTGATTTCAATGTCGTCTTCAACC
ATGAACCTGAAAGTATTTCATGGTATATAAATGACCAAGAAGTTAAACCA
TCAGATAAATACACTATCGACAAACTCGAAAAGAAATACTTTCTCAGATT
CAATTACTGTGAAATGGAAGATACGAAAGCAAGCATTAAATTTGTTGCTA
AAATCAAAGACAAGGAACTCGCCAATTCTGTCAAACTCAAAGTACAACCT
GCAGCTCCAGGGTTGAAACCGCTTGGTGATGTGAAGGAAGTTTATTGTGT
TGGTGATACTGCAACGTTTACTTTACTGATAAGTGGACATCCAGAGCCGT
TTGAAATTGATTGGTTTAAAGGATTTAAAAAGATTGAGGAAGATGAGATC
AAATCAGAAATCCAAATTTCAACAAATAAAGTTTCATTCATCTTGAAATA
TTTGGATCCTTCCGATGCAGCAACATACAAATGTGTTATCAAAAGTTCAA
CTGGAAAATCTGAGTATAAGTATAATCCAATAAAGGTCAAGGAGAAACTT
GAATTTGAAAAGCTGAAAGCTGCTTCAAAAGATAGTGATACGTCATCAAG
AAGACAAGCTTCGTTTGAAAAGATCTTAGATGAAGAAGAAATTGTAGAGG
AACCAAATGATCAAGATGTCCAAGAAACAGAGGCTGAGATCACAGCTGAA
GAAGCTGCTCTCCTAGAAGAAGGATTCGATTCTTGGGCGAGTGATGATGA
CGTTGATGACGAAGGACGAGCAATGAAAGCAGGTCGAAGAGGCTTTGGTT
ATCTTGACCGAAAGCGACCAAAGAAGGAAGATAATACTCTTCTCAAAACC
ATTGAAAAGTTGAAACCACAAGTCATTGAAGAGGGTGATAACGCCACGTT
CAAAGTATTGTTATCAGCCACAGTTGATGAATTCAAATGGTTTATCAACA
AGGTTGAAGTGTTTCCTTCTGAACGCTTCTTGATAGCAACTACAGAGAAT
GAGTTTACTTTAACCATAAAGGAATGTTCACTTGAAGATGATAATACATC
AGTCAGATTTAACGCAAAATTGGATACAGACGAAGTCTTTGGATCTGTAA
AGCTCAAGGTGCAGCCAGCAGCTCCAAGTTTGAAACCACTTGGAGATGTC
AAGGAAGTCTATTGTGCTGGTGATAGTGAGACGTTTGCTTTGTTGATATG
TGGACACCCCGAACCATTTGAGATTGACTGGTATAAAGGATTCGAGAAGA
TCGGAGACGATGAAGCAAGATCTGAAATCGAAATTTCCTCCAAAAAGGTG
TCACTTTTACTGAGAGATATGGAACCATCAGATGCATCAACCTACAAATG
TGTTATCAAAAGTTCAGCGGGTGAAACTGAATATGCCTTTCTTCCATTTT
CTGTTAAAGATAAACACGAGTATGAGCAATGGTTGAAATCTCAAGCACCA
AACAAAAGTGATGACAAAAATCGAAAAGATGTGGACGTTAAACCAGAGAG
TGAATCTCTTGAAGAAGGATCTATTGAAGATGACAGTTCAGCTATCGAAG
CATCTGCCAAAGATACTGCAAACGCCTTAGAAGAAGAAGAGCCAATGCTT
GAGGAAGTGATCGAGCAAGAACAAATAATTCTGGAAGAGGTTGACGATGG
AACACCATTCGTTGTCAAAGAAAAGATGAAACCAATTACTGCAACTTCTG
ATGAAAAAGCTACTCTGTGTGTTCGTCTTTCAAAACCAGCAAAAGAATTC
AAATGGTTTGTAAACAATGTTGAAATCACACCTGAGAGCGAAAAATTCAT
CTTATCTGAAGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069301TCONS_00069301Clytia hemisphaericatranscript
TCONS_00069300TCONS_00069300Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069300-proteinTCONS_00069300-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_496supercontigscaffold_496:417178..420639 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.06	0.11	0.07	0.26	0.13	0.08	0.2	0.05	0.05	0.06	0.01	0.16	0.01	0.07	0.04	1.36	1.92	0.01	0.07	5.55	3.04	1.5	1.9	3.26	4.61	0.03	0.09	0.07	0.02