TCONS_00069300 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069300
Unique NameTCONS_00069300
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3462

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069300 ID=TCONS_00069300|Name=TCONS_00069300|organism=Clytia hemisphaerica|type=transcript|length=3462bp
TCGTCTTTCAAAACCagcaaaagaattcaaatgGTTTGTAAACAATGTGG
AAATCACACCTGAGAGCGAAAAATTCATCTTATCTGAAGATGATGGCCTT
TATTCTTTGACATTCAAGAACTGTACTATGGACGACGATAAAAAAGCAGT
CAAATACGCTGCAACATGTTTTAAGAAGCAACTTACGGATTCTACTCGTA
TGAAAGTTAAACCAGCAACTCCGGAGCTGATTTGCACCAGCCAAATCAAA
GATCTTTACGAAGTTGGTGAAGAAGTACGAATTGACCTTGATATTAAGGG
ACACAAAGAACCTTTTACTGTAAACTTTGCGAAAGGATTCAGAAAGATCT
CAGAGCAAGAAGGAAAGGTTGAAATCAATATCGTCGAAAAACATGTGTCG
TTTATATTGAAAAACATAGATTCTACTGATGCTGGAACTTATAAATGTAC
TGTCAAAAGTTCAGTTGCAACTTCTGAACTCAAGTTCAAGCCAATCAAAG
TTAACAAAACTGCTGAGGTTGTTAAGGAAACAGTTTCATTTGAGATTGAA
GAGAAAATGAAACCAGTTGTTGCAGAATGTGGTGACAGTGCTGATTTCAA
TGTCGTCTTCAACCATGAACCTGAAAGTATTTCATGGTATATAAATGACC
AAGAAGTTAAACCATCAGATAAATACACCATCGACAAACtcgaaaagaaa
tattttctcaGATTCAATTACTGTGAAACNGCGGGCGAAACTGAATATGC
CTATCTTCCATTTTCTGTTAAAGATAAACATGAGTATGAGCAATGGTTGA
AATCTCAAGAACCAAACAAAAACGATGACAAAGAACGACAAGATGTCGAC
GCTAAACCAGAGAGTGAATCTCTTGAAGAAGGATCTGTTGAAGATGACAG
TTCAGCTATCGAAGCATCTGCCAAAGATACTGCAAACGTCTTAGAAGAAG
AAGAACCAATGCTTGAGGAAGTGATCGAGCAAGAACAAATAATTCCGGAA
GAGGTTGACGATGGAACACCATTCGTTGTCAAAGAAAAGATGAAACCAAT
TACTGCAACTTCTGATGAAAAAGCTACTCTGTGTGTTCGTCTTTCAAAGT
CagcaaaagaattcaaatgGTTTGTAAACAATTTGGAAATCACACCTGAG
AGCGAAAAATTCACCTTATCTGAAGATGATGGCCTTTATTCTTTGACATT
CAAGAACTGTACTATGGACGACGATAAAAAAGCAGTCAAATACGCTGCAA
CATGTTTTAAGAAGCAACTTACGGATTCTACTCGTATGAAAGTTAAACCA
GCAACTCCGGAGCTGATTTGCACCAGCCAAATCAAAGATCTTTACGAAGT
TGGTGAAGAAGTACGGATTGACCTTGATATTAAGGGACACAAAGAACCTT
TTACTGTAAACTTTGCGAAAGGATTCAGAAAGATCTCAGAGCAAGAAGGA
AAGGTTGAAATCAATATCGTCGAAAAACATGTGTCGTTTATATTGAAAAA
CATAGATTCTACTGATGCTGGAACTTATAAATGTACTGTCAAAAGTTCAG
TTGCAACTTCTGAACTCAAGTTCAAGCCAATCAAAGTTAACAAAACTGCT
GAGGTTGTTAAGGAAACAGTTTCATTTGAGATTGAAGAGAAAATGAAACC
AGTTGTTGCAGAATGTGGTGACAGTGCTGATTTCAATGTCGTCTTCAACC
ATGAACCTGAAAGTATTTCATGGTATATAAATGACCAAGAAGTTAAACCA
TCAGATAAATACACTATCGACAAActcgaaaagaaatactttctcAGATT
CAATTACTGTGAAATGGAAGATACGAAAGCAAGCATTAAATTTGTTGCTA
AAATCAAAGACAAGGAACTCGCCAATTCTGTCAAACTCAAAGTACAACCT
GCAGCTCCAGGGTTGAAACCGCTTGGTGATGTGAAGGAAGTTTATTGTGT
TGGTGATACTGCAACGTTTACTTTACTGATAAGTGGACATCCAGAGCCGT
TTGAAATTGATTGGTTTAAAGGATTTAAAAAGATTGAGGAAGATGAGATC
AAAtcagaaatccaaatttcaacAAATAAAGTTTCATTCATCTTGAAATA
TTTGGATCCTTCCGATGCAGCAACATACAAATGTGTTATCAAAAGTTCAA
CTGGAAAATCTGAGTATAAGTATAATCCAATAAAGGTCAAGGAGaaactt
gaatttgaaaagctgAAAGCTGCTTCAAAAGATAGTGATACGTCATCAAG
AAGACAAGCTTCGTTTGAAAAGATCTTAGATGAAGAAGAAATTGTAGAGG
AACCAAATGATCAAGATGTCCAAGAAACAGAGGCTGAGATCACAGCTGAA
GAAGCTGCTCTCCTAGAAGAAGGATTCGATTCTTGGGCGAGTGATGATGA
CGTTGATGACGAAGGACGAGCAATGAAAGCAGGTCGAAGAGGCTTTGGTT
ATCTTGACCGAAAGCGACCAAAGAAGGAAGATAATACTCTTCTCAAAACC
ATTGAAAAGTTGAAACCACAAGTCATTGAAGAGGGTGATAACGCCACGTT
CAAAGTATTGTTATCAGCCACAGTTGATGAATTCAAATGGTTTATCAACA
AGGTTGAAGTGTTTCCTTCTGAACGCTTCTTGATAGCAACTACAGAGAAT
GAGTTTACTTTAACCATAAAGGAATGTTCACTTGAAGATGATAATACATC
AGTCAGATTTAACGCAAAATTGGATACAGACGAAGTCTTTGGATCTGTAA
AGCTCAAGGTGCAGCCAGCAGCTCCAAGTTTGAAACCACTTGGAGATGTC
AAGGAAGTCTATTGTGCTGGTGATAGTGAGACGTTTGCTTTGTTGATATG
TGGACACCCCGAACCATTTGAGATTGACTGGTATAAAGGATTCGAGAAGA
TCGGAGACGATGAAGCAAGATCTGAAATCGAAATTTCCTCCAAAAAGGTG
TCACTTTTACTGAGAGATATGGAACCATCAGATGCATCAACCTACAAATG
TGTTATCAAAAGTTCAGCGGGTGAAACTGAATATGCCTTTCTTCCATTTT
CTGTTAAAGATAAACACGAGTATGAGCAATGGTTGAAATCTCAAGCACCA
AACAAAAGTGATGACAAAAATCGAAAAGATGTGGACGTTAAACCAGAGAG
TGAATCTCTTGAAGAAGGATCTATTGAAGATGACAGTTCAGCTATCGAAG
CATCTGCCAAAGATACTGCAAACGCCTTAGAAGAAGAAGAGCCAATGCTT
GAGGAAGTGATCGAGCAAGAACAAATAATTCTGGAAGAGGTTGACGATGG
AACACCATTCGTTGTCAAAGAAAAGATGAAACCAATTACTGCAACTTCTG
ATGAAAAAGCTACTCTGTGTGTTCGTCTTTCAAAACCagcaaaagaattc
aaatgGTTTGTAAACAATGTTGAAATCACACCTGAGAGCGAAAAATTCAT
CTTATCTGAAGA
Run BLAST on NCBI

protein sequence of TCONS_00069300-protein

>TCONS_00069300-protein ID=TCONS_00069300-protein|Name=TCONS_00069300-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1153bp
RLSKPAKEFKWFVNNVEITPESEKFILSEDDGLYSLTFKNCTMDDDKKAV
KYAATCFKKQLTDSTRMKVKPATPELICTSQIKDLYEVGEEVRIDLDIKG
HKEPFTVNFAKGFRKISEQEGKVEINIVEKHVSFILKNIDSTDAGTYKCT
VKSSVATSELKFKPIKVNKTAEVVKETVSFEIEEKMKPVVAECGDSADFN
VVFNHEPESISWYINDQEVKPSDKYTIDKLEKKYFLRFNYCEXAGETEYA
YLPFSVKDKHEYEQWLKSQEPNKNDDKERQDVDAKPESESLEEGSVEDDS
SAIEASAKDTANVLEEEEPMLEEVIEQEQIIPEEVDDGTPFVVKEKMKPI
TATSDEKATLCVRLSKSAKEFKWFVNNLEITPESEKFTLSEDDGLYSLTF
KNCTMDDDKKAVKYAATCFKKQLTDSTRMKVKPATPELICTSQIKDLYEV
GEEVRIDLDIKGHKEPFTVNFAKGFRKISEQEGKVEINIVEKHVSFILKN
IDSTDAGTYKCTVKSSVATSELKFKPIKVNKTAEVVKETVSFEIEEKMKP
VVAECGDSADFNVVFNHEPESISWYINDQEVKPSDKYTIDKLEKKYFLRF
NYCEMEDTKASIKFVAKIKDKELANSVKLKVQPAAPGLKPLGDVKEVYCV
GDTATFTLLISGHPEPFEIDWFKGFKKIEEDEIKSEIQISTNKVSFILKY
LDPSDAATYKCVIKSSTGKSEYKYNPIKVKEKLEFEKLKAASKDSDTSSR
RQASFEKILDEEEIVEEPNDQDVQETEAEITAEEAALLEEGFDSWASDDD
VDDEGRAMKAGRRGFGYLDRKRPKKEDNTLLKTIEKLKPQVIEEGDNATF
KVLLSATVDEFKWFINKVEVFPSERFLIATTENEFTLTIKECSLEDDNTS
VRFNAKLDTDEVFGSVKLKVQPAAPSLKPLGDVKEVYCAGDSETFALLIC
GHPEPFEIDWYKGFEKIGDDEARSEIEISSKKVSLLLRDMEPSDASTYKC
VIKSSAGETEYAFLPFSVKDKHEYEQWLKSQAPNKSDDKNRKDVDVKPES
ESLEEGSIEDDSSAIEASAKDTANALEEEEPMLEEVIEQEQIILEEVDDG
TPFVVKEKMKPITATSDEKATLCVRLSKPAKEFKWFVNNVEITPESEKFI
LSE
Run BLAST on NCBI

transcript from alignment at scaffold_496:417178..420639

Legend: exonthree_prime_UTRCDSfive_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069300 ID=TCONS_00069300|Name=TCONS_00069300|organism=Clytia hemisphaerica|type=transcript|length=3462bp|location=Sequence derived from alignment at scaffold_496:417178..420639 (Clytia hemisphaerica)
TCTTCAGATAAGATGAATTTTTCGCTCTCAGGTGTGATTTCAACATTGTT TACAAACcatttgaattcttttgctGGTTTTGAAAGACGAACACACAGAG TAGCTTTTTCATCAGAAGTTGCAGTAATTGGTTTCATCTTTTCTTTGACA ACGAATGGTGTTCCATCGTCAACCTCTTCCAGAATTATTTGTTCTTGCTC GATCACTTCCTCAAGCATTGGCTCTTCTTCTTCTAAGGCGTTTGCAGTAT CTTTGGCAGATGCTTCGATAGCTGAACTGTCATCTTCAATAGATCCTTCT TCAAGAGATTCACTCTCTGGTTTAACGTCCACATCTTTTCGATTTTTGTC ATCACTTTTGTTTGGTGCTTGAGATTTCAACCATTGCTCATACTCGTGTT TATCTTTAACAGAAAATGGAAGAAAGGCATATTCAGTTTCACCCGCTGAA CTTTTGATAACACATTTGTAGGTTGATGCATCTGATGGTTCCATATCTCT CAGTAAAAGTGACACCTTTTTGGAGGAAATTTCGATTTCAGATCTTGCTT CATCGTCTCCGATCTTCTCGAATCCTTTATACCAGTCAATCTCAAATGGT TCGGGGTGTCCACATATCAACAAAGCAAACGTCTCACTATCACCAGCACA ATAGACTTCCTTGACATCTCCAAGTGGTTTCAAACTTGGAGCTGCTGGCT GCACCTTGAGCTTTACAGATCCAAAGACTTCGTCTGTATCCAATTTTGCG TTAAATCTGACTGATGTATTATCATCTTCAAGTGAACATTCCTTTATGGT TAAAGTAAACTCATTCTCTGTAGTTGCTATCAAGAAGCGTTCAGAAGGAA ACACTTCAACCTTGTTGATAAACCATTTGAATTCATCAACTGTGGCTGAT AACAATACTTTGAACGTGGCGTTATCACCCTCTTCAATGACTTGTGGTTT CAACTTTTCAATGGTTTTGAGAAGAGTATTATCTTCCTTCTTTGGTCGCT TTCGGTCAAGATAACCAAAGCCTCTTCGACCTGCTTTCATTGCTCGTCCT TCGTCATCAACGTCATCATCACTCGCCCAAGAATCGAATCCTTCTTCTAG GAGAGCAGCTTCTTCAGCTGTGATCTCAGCCTCTGTTTCTTGGACATCTT GATCATTTGGTTCCTCTACAATTTCTTCTTCATCTAAGATCTTTTCAAAC GAAGCTTGTCTTCTTGATGACGTATCACTATCTTTTGAAGCAGCTTTcag cttttcaaattcaagtttCTCCTTGACCTTTATTGGATTATACTTATACT CAGATTTTCCAGTTGAACTTTTGATAACACATTTGTATGTTGCTGCATCG GAAGGATCCAAATATTTCAAGATGAATGAAACTTTATTTgttgaaatttg gatttctgaTTTGATCTCATCTTCCTCAATCTTTTTAAATCCTTTAAACC AATCAATTTCAAACGGCTCTGGATGTCCACTTATCAGTAAAGTAAACGTT GCAGTATCACCAACACAATAAACTTCCTTCACATCACCAAGCGGTTTCAA CCCTGGAGCTGCAGGTTGTACTTTGAGTTTGACAGAATTGGCGAGTTCCT TGTCTTTGATTTTAGCAACAAATTTAATGCTTGCTTTCGTATCTTCCATT TCACAGTAATTGAATCTgagaaagtatttcttttcgagTTTGTCGATAGT GTATTTATCTGATGGTTTAACTTCTTGGTCATTTATATACCATGAAATAC TTTCAGGTTCATGGTTGAAGACGACATTGAAATCAGCACTGTCACCACAT TCTGCAACAACTGGTTTCATTTTCTCTTCAATCTCAAATGAAACTGTTTC CTTAACAACCTCAGCAGTTTTGTTAACTTTGATTGGCTTGAACTTGAGTT CAGAAGTTGCAACTGAACTTTTGACAGTACATTTATAAGTTCCAGCATCA GTAGAATCTATGTTTTTCAATATAAACGACACATGTTTTTCGACGATATT GATTTCAACCTTTCCTTCTTGCTCTGAGATCTTTCTGAATCCTTTCGCAA AGTTTACAGTAAAAGGTTCTTTGTGTCCCTTAATATCAAGGTCAATCCGT ACTTCTTCACCAACTTCGTAAAGATCTTTGATTTGGCTGGTGCAAATCAG CTCCGGAGTTGCTGGTTTAACTTTCATACGAGTAGAATCCGTAAGTTGCT TCTTAAAACATGTTGCAGCGTATTTGACTGCTTTTTTATCGTCGTCCATA GTACAGTTCTTGAATGTCAAAGAATAAAGGCCATCATCTTCAGATAAGGT GAATTTTTCGCTCTCAGGTGTGATTTCCAAATTGTTTACAAACcatttga attcttttgctGACTTTGAAAGACGAACACACAGAGTAGCTTTTTCATCA GAAGTTGCAGTAATTGGTTTCATCTTTTCTTTGACAACGAATGGTGTTCC ATCGTCAACCTCTTCCGGAATTATTTGTTCTTGCTCGATCACTTCCTCAA GCATTGGTTCTTCTTCTTCTAAGACGTTTGCAGTATCTTTGGCAGATGCT TCGATAGCTGAACTGTCATCTTCAACAGATCCTTCTTCAAGAGATTCACT CTCTGGTTTAGCGTCGACATCTTGTCGTTCTTTGTCATCGTTTTTGTTTG GTTCTTGAGATTTCAACCATTGCTCATACTCATGTTTATCTTTAACAGAA AATGGAAGATAGGCATATTCAGTTTCGCCCGCNGTTTCACAGTAATTGAA TCtgagaaaatatttcttttcgaGTTTGTCGATGGTGTATTTATCTGATG GTTTAACTTCTTGGTCATTTATATACCATGAAATACTTTCAGGTTCATGG TTGAAGACGACATTGAAATCAGCACTGTCACCACATTCTGCAACAACTGG TTTCATTTTCTCTTCAATCTCAAATGAAACTGTTTCCTTAACAACCTCAG CAGTTTTGTTAACTTTGATTGGCTTGAACTTGAGTTCAGAAGTTGCAACT GAACTTTTGACAGTACATTTATAAGTTCCAGCATCAGTAGAATCTATGTT TTTCAATATAAACGACACATGTTTTTCGACGATATTGATTTCAACCTTTC CTTCTTGCTCTGAGATCTTTCTGAATCCTTTCGCAAAGTTTACAGTAAAA GGTTCTTTGTGTCCCTTAATATCAAGGTCAATTCGTACTTCTTCACCAAC TTCGTAAAGATCTTTGATTTGGCTGGTGCAAATCAGCTCCGGAGTTGCTG GTTTAACTTTCATACGAGTAGAATCCGTAAGTTGCTTCTTAAAACATGTT GCAGCGTATTTGACTGCTTTTTTATCGTCGTCCATAGTACAGTTCTTGAA TGTCAAAGAATAAAGGCCATCATCTTCAGATAAGATGAATTTTTCGCTCT CAGGTGTGATTTCCACATTGTTTACAAACcatttgaattcttttgctGGT TTTGAAAGACGA

Coding sequence (CDS) from alignment at scaffold_496:417178..420639

>TCONS_00069300 ID=TCONS_00069300|Name=TCONS_00069300|organism=Clytia hemisphaerica|type=CDS|length=3459bp|location=Sequence derived from alignment at scaffold_496:417178..420639 (Clytia hemisphaerica)
TTCAGATAAGATGAATTTTTCGCTCTCAGGTGTGATTTCAACATTGTTTA
CAAACcatttgaattcttttgctGGTTTTGAAAGACGAACACACAGAGTA
GCTTTTTCATCAGAAGTTGCAGTAATTGGTTTCATCTTTTCTTTGACAAC
GAATGGTGTTCCATCGTCAACCTCTTCCAGAATTATTTGTTCTTGCTCGA
TCACTTCCTCAAGCATTGGCTCTTCTTCTTCTAAGGCGTTTGCAGTATCT
TTGGCAGATGCTTCGATAGCTGAACTGTCATCTTCAATAGATCCTTCTTC
AAGAGATTCACTCTCTGGTTTAACGTCCACATCTTTTCGATTTTTGTCAT
CACTTTTGTTTGGTGCTTGAGATTTCAACCATTGCTCATACTCGTGTTTA
TCTTTAACAGAAAATGGAAGAAAGGCATATTCAGTTTCACCCGCTGAACT
TTTGATAACACATTTGTAGGTTGATGCATCTGATGGTTCCATATCTCTCA
GTAAAAGTGACACCTTTTTGGAGGAAATTTCGATTTCAGATCTTGCTTCA
TCGTCTCCGATCTTCTCGAATCCTTTATACCAGTCAATCTCAAATGGTTC
GGGGTGTCCACATATCAACAAAGCAAACGTCTCACTATCACCAGCACAAT
AGACTTCCTTGACATCTCCAAGTGGTTTCAAACTTGGAGCTGCTGGCTGC
ACCTTGAGCTTTACAGATCCAAAGACTTCGTCTGTATCCAATTTTGCGTT
AAATCTGACTGATGTATTATCATCTTCAAGTGAACATTCCTTTATGGTTA
AAGTAAACTCATTCTCTGTAGTTGCTATCAAGAAGCGTTCAGAAGGAAAC
ACTTCAACCTTGTTGATAAACCATTTGAATTCATCAACTGTGGCTGATAA
CAATACTTTGAACGTGGCGTTATCACCCTCTTCAATGACTTGTGGTTTCA
ACTTTTCAATGGTTTTGAGAAGAGTATTATCTTCCTTCTTTGGTCGCTTT
CGGTCAAGATAACCAAAGCCTCTTCGACCTGCTTTCATTGCTCGTCCTTC
GTCATCAACGTCATCATCACTCGCCCAAGAATCGAATCCTTCTTCTAGGA
GAGCAGCTTCTTCAGCTGTGATCTCAGCCTCTGTTTCTTGGACATCTTGA
TCATTTGGTTCCTCTACAATTTCTTCTTCATCTAAGATCTTTTCAAACGA
AGCTTGTCTTCTTGATGACGTATCACTATCTTTTGAAGCAGCTTTcagct
tttcaaattcaagtttCTCCTTGACCTTTATTGGATTATACTTATACTCA
GATTTTCCAGTTGAACTTTTGATAACACATTTGTATGTTGCTGCATCGGA
AGGATCCAAATATTTCAAGATGAATGAAACTTTATTTgttgaaatttgga
tttctgaTTTGATCTCATCTTCCTCAATCTTTTTAAATCCTTTAAACCAA
TCAATTTCAAACGGCTCTGGATGTCCACTTATCAGTAAAGTAAACGTTGC
AGTATCACCAACACAATAAACTTCCTTCACATCACCAAGCGGTTTCAACC
CTGGAGCTGCAGGTTGTACTTTGAGTTTGACAGAATTGGCGAGTTCCTTG
TCTTTGATTTTAGCAACAAATTTAATGCTTGCTTTCGTATCTTCCATTTC
ACAGTAATTGAATCTgagaaagtatttcttttcgagTTTGTCGATAGTGT
ATTTATCTGATGGTTTAACTTCTTGGTCATTTATATACCATGAAATACTT
TCAGGTTCATGGTTGAAGACGACATTGAAATCAGCACTGTCACCACATTC
TGCAACAACTGGTTTCATTTTCTCTTCAATCTCAAATGAAACTGTTTCCT
TAACAACCTCAGCAGTTTTGTTAACTTTGATTGGCTTGAACTTGAGTTCA
GAAGTTGCAACTGAACTTTTGACAGTACATTTATAAGTTCCAGCATCAGT
AGAATCTATGTTTTTCAATATAAACGACACATGTTTTTCGACGATATTGA
TTTCAACCTTTCCTTCTTGCTCTGAGATCTTTCTGAATCCTTTCGCAAAG
TTTACAGTAAAAGGTTCTTTGTGTCCCTTAATATCAAGGTCAATCCGTAC
TTCTTCACCAACTTCGTAAAGATCTTTGATTTGGCTGGTGCAAATCAGCT
CCGGAGTTGCTGGTTTAACTTTCATACGAGTAGAATCCGTAAGTTGCTTC
TTAAAACATGTTGCAGCGTATTTGACTGCTTTTTTATCGTCGTCCATAGT
ACAGTTCTTGAATGTCAAAGAATAAAGGCCATCATCTTCAGATAAGGTGA
ATTTTTCGCTCTCAGGTGTGATTTCCAAATTGTTTACAAACcatttgaat
tcttttgctGACTTTGAAAGACGAACACACAGAGTAGCTTTTTCATCAGA
AGTTGCAGTAATTGGTTTCATCTTTTCTTTGACAACGAATGGTGTTCCAT
CGTCAACCTCTTCCGGAATTATTTGTTCTTGCTCGATCACTTCCTCAAGC
ATTGGTTCTTCTTCTTCTAAGACGTTTGCAGTATCTTTGGCAGATGCTTC
GATAGCTGAACTGTCATCTTCAACAGATCCTTCTTCAAGAGATTCACTCT
CTGGTTTAGCGTCGACATCTTGTCGTTCTTTGTCATCGTTTTTGTTTGGT
TCTTGAGATTTCAACCATTGCTCATACTCATGTTTATCTTTAACAGAAAA
TGGAAGATAGGCATATTCAGTTTCGCCCGCNGTTTCACAGTAATTGAATC
tgagaaaatatttcttttcgaGTTTGTCGATGGTGTATTTATCTGATGGT
TTAACTTCTTGGTCATTTATATACCATGAAATACTTTCAGGTTCATGGTT
GAAGACGACATTGAAATCAGCACTGTCACCACATTCTGCAACAACTGGTT
TCATTTTCTCTTCAATCTCAAATGAAACTGTTTCCTTAACAACCTCAGCA
GTTTTGTTAACTTTGATTGGCTTGAACTTGAGTTCAGAAGTTGCAACTGA
ACTTTTGACAGTACATTTATAAGTTCCAGCATCAGTAGAATCTATGTTTT
TCAATATAAACGACACATGTTTTTCGACGATATTGATTTCAACCTTTCCT
TCTTGCTCTGAGATCTTTCTGAATCCTTTCGCAAAGTTTACAGTAAAAGG
TTCTTTGTGTCCCTTAATATCAAGGTCAATTCGTACTTCTTCACCAACTT
CGTAAAGATCTTTGATTTGGCTGGTGCAAATCAGCTCCGGAGTTGCTGGT
TTAACTTTCATACGAGTAGAATCCGTAAGTTGCTTCTTAAAACATGTTGC
AGCGTATTTGACTGCTTTTTTATCGTCGTCCATAGTACAGTTCTTGAATG
TCAAAGAATAAAGGCCATCATCTTCAGATAAGATGAATTTTTCGCTCTCA
GGTGTGATTTCCACATTGTTTACAAACcatttgaattcttttgctGGTTT
TGAAAGACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043183XLOC_043183Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069300-proteinTCONS_00069300-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069300-exon-scaffold_496-1491911889:417178..420639TCONS_00069300-exon-scaffold_496-1491911889:417178..420639Clytia hemisphaericaexon
TCONS_00069300-exon-scaffold_496-1510915933:417178..420639TCONS_00069300-exon-scaffold_496-1510915933:417178..420639Clytia hemisphaericaexon
TCONS_00069300-exon-scaffold_496-1575043694:417178..420639TCONS_00069300-exon-scaffold_496-1575043694:417178..420639Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_496supercontigscaffold_496:417178..420639 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.111137 0.0196561 0.258963 0.112604 0.0841296 0.196903 0.0459521 0.0455352 0 0.0145269 0.0593817 0.00753267 0.0681217 0.0160976 1.20156 1.55963 0.0115935 0.0146927 3.46484 1.58919 0.841322 1.08482 2.92505 3.48425 0.029909 0.0864749 0.0293206 0.0246661
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003599Ig_sub
IPR013783Ig-like_fold
IPR013098Ig_I-set
IPR007110Ig-like_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069300 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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