XLOC_042081 (gene) - C. hemisphaerica

Overview
NameXLOC_042081
Unique NameXLOC_042081
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_469:213163..221665+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042081 ID=XLOC_042081|Name=XLOC_042081|organism=Clytia hemisphaerica|type=gene|length=8503bp|location=Sequence derived from alignment at scaffold_469:213163..221665+ (Clytia hemisphaerica)
CTCAGTCTTCAGGTAAAAGAAACCACTCCCTGGACGCATCTTAAGAAAAA CGAAGCAGTACAAAAAATAATGCAATGGAGAGATCTTTGAATTGATACGA CATTGAGAGGATAAAAAAGTTCAAAGGAAAAGGCATCTGCTGCAAAGTGC ATTCAAAAAGCAAGCAGGTATAAAaagctttctttgttttgttttctttg ccAAGATGTTGAAACCTTGATAAGGATGTAGGTTCCCACTCGTATAACAA AAATCTAAATAGCCTTTTAGCTTGGCATTACCTCATTTCAAAGGCAATGC TTTTTATTTTCCTTGGACTAAGATCATGTgcaatgataaaatgatgatAA CAAAGAAAgcagaaaaatagttttttcgCAATTCGCAATTTGGTTTCGCA TCTTAAAGTGTCATAAAAGATTTCGAGTATCTATTTCCAGCAACTTAGAT TCGATATTTCGATAAGACAACTTTTATGCTGCCTTTGTATCAATTTTTCA GTCTCCGTTTTATTCAGCCCTAcattaaggctttgcagactctacaTAAA CAAcaattgagaacattttaagaacacttaaaagaacatccaaagcaTCG AAANCAgctttttaaggctttgcagactctacaTAAACAACaattgagaa cattttgagaacacttaaaagaacatccaaagcaTCGAAAATACTTTGTC TAATTGCGTGTTCTTAAAATGCATTTCCAACACAAATTAACGAATATTGA GGGCTGTCCAACTTTCAAGTATTCCATCTTATGGTACATATACCTACATT TGAATATCTGATTCTCCGTATGTTACAAACAGCTAAGTAGAGGTTGCTGG TTGTGGACCATGTAGTGCCAACCATTGAGTTTagagcccgaagggctaga gtagaatctttaacctttctcatgcaaaaaaaagtgaagccacttatttc ctagaacgcgccgcaatcatgatGACGGATGTATCTagtttatctggcac ccagatggtgaaattttcatccgacacgctaaagctttgaaggtcgggaa atttttcaacatctggaaggtttacattacggaattttgcgagaccgcgt caagaattttgcagcgggaggtctggtaacccagccctcgtttccGGGGA TTGgtgggtccaaccgaaatatttataGGTTTACGCACAAGGGTTGTTGA ATCCGACTGAGGGTGCGgtacatcaaaggccgactatcattcctctccga tgggaaattggcccgctcctttaaagctttagcgtggggggccgccaatc cgccatcggaatatcatataagtatctagtggttcctttgtttttgagga ctgcattttttgaaatctatatAGATTCTACATTCAATCaggtttgtgta aaaaccacgcgcgggcgttctggatgggaaattaagcggcttcatttccc atccaggagtctctaGTCTAGCCCTCTGGGCTTGGAAGTCAACGATGCCA ACCGAAAGAATTGAAAATTCCATACAGGCTAAACCGAAATTATTTTATAT GCATAATACTATATCCCATGGAGTCATGgtctaaaaaaaacttttagaag TTGAGATTGATCTTCATACAATCCGTATACACTATTTTTCTGGTCTGCTC TGCCAATAACTTTTACTTCCTCAACTATACAATATATGATAAATTTGTTT TacgaaagatttaaaaaaaggaaaaacattaAACGAAACAAGATTATACC TGTTTGAACGAATACCCATAATGCTCCTGGTAAAGATCTTTGCGGTAATT GTTGTGCATTCTGTTGTCTGAATTATGATGGTGAAAATTCCTGCCTCCAG AAAAATCGGACATCTCAAAATTAATTCCTTTTCAAAATCGCCGTGTAGCC CTATATGCCTCAGGTCGATGTCAATTTTTGTCATTAAAAATCAGTCAGAG CAGAAatcgcaaaaaaatgacaaaagaaaaaatctaaaatggtcAAAAGT ATTATCACTAGGGAATTGCAATTTGCCATTCTGgtgtaaaaatattcaaa atattgccTTCATAACTGAGGGATTACCTGTCAGTAGAAGCATTGTCACA GTAGTCACTCCCAGCGGTCCGCTGTGCATTTTTTCCTTCGCTGCGGGACA AATTATACCGAGCGCAGTTCCCGTTCGCTGGCTTATCCCTTAACACAGCA TTTATTACCTTATTGTCTTCGCCTTTTAAGCACCTTTTCTTTAAGCACCC AACACACGATGAGCTAAATTTCTTATTTAGGGGTCATTAAACCCGTGTAG ATAAAACAAGCTCATTAAGCACTTCTGAAAATGTCTAAGGGTCTTCTTTT TTGAGTCGGCTCTATGGTAGAAGATTCTCTTTTACCCCTAATTACCTGAG ATGCCTTCGAATAAAAGACTACGTTGTTttgattcttatgaaaaagagaT TGCATCGAAGTTGTTATTTTTGTGATAGTATCACTGCATTTTTATTTTGA TCCAATTTGCAAAGCAGCATGGGAGCTTTTCAATCCCTTTGCACTTTTGT AATATTTCTATACATGATTTTCTATGAGCATGTATAAtttttaacttgaa attttttgatccgTGTCCCTTGTGTTGCTCAAATAGCCCGCTTTGCCCGC CGAAGCATGTTCCTTAAGATCTGTTaatattcaaattcaaataagATTTA AAAGTGCTATGtttgtaaaattgaataaagacTTATTGTATTCTCTTAAT TAagattcttaaattgttcttaaccaCTGTTCTTATACGGAAAATAAGGG TAATTGATTGAGTAACGAATTCTCAATAAGCAACGGTCTTACTGTATTCA TCATCCACAGttctttttaattaatttaCAAAGCCTCTTTTCATAACTCA TACTTTATTACGGCATGAATATCTGACCAGCACTTTTTAAAGGAATTCCG CTGACTTTGCTTCAGGAAATTTGAAATACATAAACACCGCCTGCTCAGGA TCTTGGTGGTCAActcaaaaaaaagaatataCCATATCACATAAGAAAAG ACATACCGATAGAATAAAATTCATATTTCTGATACATTAGataattttgg aaaagttttgaaaaataaaactgtTAACTAAAATTTTACAATATTTACAT TTAATTAGAATCATTTCGCAGAATCGGGTCATGATACCTGAAAACTGCGA AAAGTGTTGTTTTTATCCCTCATTAAGGTAAAACGGTGTCCAAAGCCTAT GCGTCGATTTTCCAGTtagaacaaaaaaacaattcataAGAAGCGATTTA AGCGTAAAAAGTATCAAATCTTCCAGGAAAATTTAAACCCCTACTCTGCC ATATCTCAAATTTTCGAACCATGCCTGATAAATAATAGCCCGTCATTCGT GTTTTTTCttcgcaattaacgtctattccactttgcaattttttcgaatg ttttgagctcaggttttcgggctccaaacattcgattttttgacgtcact ttaaacttttgaagccctTTGCAGTAGGGagaaatcgaatttgcgtcaaa acacttgaaaggctccAACTTTCATATCTCTCACGCTAAAAAACTTCATG TGACCCATGGTATTAAAATTGTATGCCCTTTTCAGTTAGGGTTTGTAGCC AATTTGGGCTTTTATCCCTTCTTAACCCTTTCTTCCACGTAATTCCATAA TTAAGGTTGATCTTCACTTTTCAACAAGTTAAAAACCTCTTCAATTTGCA CGTTCGAACGTTTCGTATTTCGCGTTAATTTACTACTTGGTTTAATGACC atgttgttcttttttattGACGACGGGACCAGAATGCTTTGCGCTTTGGT TTGGCCTTTCTTTATTGTTACAGGAACACTAAGTCTCTTTGCTgagtcaa aagaatttttttgtttactgttTTGAACTGTAGTTGATTTCTTGTCCAAT AAATTAATGTCTTTCTGCAACTCACGCAGTAAATACTCTTTCGGTTTTTG CGGTAATTTACCGAACCCTTTCTTGACCGCCCGCTCATCGTGCGTGCTGA CTGAATGCGGTCGTATGAAATGTGAATGCTTTGGTGAGATGGAATGAATG AACATCCGAATATTTTTCTTCTCTATTTTTGGCACTGGTATGTCTTTATG TTTGAGAAGATTTGAAGGGTTGCTTATTGGCGATTGGATGGGGTGCACGA TTGTGTTAGCGTGTATTAAGGCGTTCTCTATCCCTTGACCTCTTTTACTT GTGGGCGGTGAGGGTGGTTCCAGAATCGGGAAATTTGCGTTCGGTTTACG CACAGGTACTGTGTGTAGCTTAACATTTGCAATATCCGATTTACCTACAT CGTCAGGAGAAATTATTTCCGCATTCATACGTAACCGTGCGGCCGTAACG TCAGAGACGTGGCTTCTAGATGGGGTGTAGTGGCGCCTTGTTGCGTTAGA CATCGGGCGGATGACTCTGAGCAGTGATTTCGAAGGGTGGAAGTCGGCGT GTGGAGTAAGAGTGGTGTCTGCTTCAGGTTTTGGGTTGTTGATGGGTAAC ATTAGCCTTTGCTCGTGATCGGCTGTCACTAGACTGACATTCTTGAATTT GATGCCATGGAAACGAGATGACTCATCAGCGATTTCCGGTTTTACGGTTA TACTTTTGGAAAATCCGTGATCGTCTGAAGTCTTTTCAACTGGGGCTGAC GTGTTNACGGTTGTACTTTTGGAAAATCCGTGATCGTCTGAAGTCTCTTC AACTGGGGCTGACGTGTTGGCCAGTTTGATCTCTCCATCGCCTGATAATT TAGCAAATTCTTCATTCTTTGATGTCACCAGGGAATCCCTTTCTTTGTTT GTTGCCAGAGACTCAACTTCTTCTTGTCTTGGGGATTCCCCTGTCTCTAA TCTTACGACGTCATTATTTTCCTCTACGCCACTCCCACTAGCCTGTTCTC CACTTCCTGCGGTTTCCTCGTCGACTTTCGACACTTCATCTTTTACATTT GGTGTTATTTGTTCAACCTTTTTCGCTTTCAATTTCACTTCTTCCTTTTC TCGTTGCTTCTCTCGTTCTTTTACTTCCTGCAGCTTCTTGTACTGTTTTG CGAAATgttccaatttttcaaagtctttttcgGTTTCTTCATCCGCTTTG TTGTCACTTATCTTTTCACGTTCAGGGTTTGTTAAATATAGTTTGTGATT CGCTTTTGCTTGAGCCATGGCCTTTGCAACCGATTCactctctttctttt tcaaggttttattCCGATCACGATTTCTCAATTGACGTTCTTTCAAATTC AagatttctttttgtaattcaaTTTCTTCGAATTGTTCCGCTAGTGGCCG CTCGAACAACTGATCATCCAACTCCCGTGTACTTCCTTCGGTAGGTTTTT GGGCGGCTGTAGGTGTTCCCGCCAACACGCCTTTTTCTTTGAGgaaatct tgaaaatgttttgatgtttggatatatttcaatatactgtTATCGAAAAC CTGCACCTCAGCCTTTGGTATTATGCCTGTATGGTGGTCATCAATGGTAG CCACTTTCATTTTACTATCCCCGTTATGCGCCTTTAGGTTGGCCAGTGCT TTCTCACTATGGCTTTTATCCTCGTTGAGTTGTTTCAACTGCTCCTGCAA TAACTTCTCATTCTTAGCGTCAAGCGGTTCTTCTACGCTTTCTTGTTTGG CGATCATGGCTTCCAAGCGCTCCAGATCTTGTTTGGGATTTTTGGTGTTG GATTCACGGAATTTGTTAAAAGATGAAGCTTCCTTTGCAAGAAATTTCAC AAGTGCATGTCCGTCTTctgaaaacgaaaaaaattcaaaaggtcTTTAAA TCATTTTTATCTTTGATGGTAAAATCTTTGGATTATATATAAAATACAGA TAAGCAAATTAGTTATTTCGAGCTTCctgaagaaaattatttttcgttta cctcactttaaaatgaaattcttcaacaaaatagaaaaggtAACATAGAG TTGGCCCTTCTTGATTCTGATCCTCCCAGACTCATAACTAGGAACTCAGG AAAAACTAACTTGTCAATGTGAACGATAATTGATTAAACAGACTCCATAC CTCCATGTGGGACGTCAGCTGCTTGATGTGCATGGTTATCCTCGTGATCA AACCCCTCTTGTCTGTGCTTctccaaaaactctttaaaaTGGTTCAAATA ACCATCCGAGAGCGTTTGTCCGCCTCCGCCGGCGCTCGCATCAGTGAAAT CATGCTCGATCTTTCCTTCGACTTTCTCAGCACCGTTCATTGTTTTcaat aaatctttcaaaacgTCTTGCTCTTCTTGGTGAGAGCTATAGTCATCGTG TATCAAGAGCTTTATATTGGACAACAATTTTCCGTCCGACTTTTTGTATT GAGGGATGTGTAGTTTGGATTCAGCCGTTGTTTCAGTGAGCTTTTTGCTT GTTTGCGCATTGTCGAATTCTTTGAGTAAAGTTGACAATTCTTTATCTTT TTGGTATAATTGCAAAGCGTTATCTGAAGGTTTAGGTAGAAAGGCTTCTG CTTTCTTACGAAAATCTGTACTTTTCTCCATCGCTTTCAGCAGTCGAAGA GTGAAGGATCCTTTTTCATCATTGGGAGCTGATTGCTCTCTTTTATCACC CGATGTCACGTTTGTTGCTAATGGTTTCTCAATCGTCAGTTCAACTGTCT TCTCTTTGTTGCTAGGCAACGTTTGTTTGGATGATTCGTCTGCTTTGATT GGTTGAGGGTTGACTGTGTCTAAATGATGTCCGTGCTCATCTTCGATGGT CAACGCTGAAGGAATATTCACAACGCTCACATCTTCGTGTCCATTCTGAC CTGCCACTGATCCTCCTTCGCTTTCCTTGGCACTCGATGCGGGAGACGCG TGATCCATTTCCGCAGGTTGTTCCAGGGGATCGATGTTGGATTGTTGAGG GTATTGAGATGCTTCCGCATATTTATTGATCTCGTCGTTCATCTTGTGAG CCTCGTTTTCCAAATTATGAGCTGCCCCACCTGTTTCATCGATTTTGTCT GCTTTGGACATCAATTCTTTGATTTGGTCTCCCATTCCAGTATTATCTGA CGTGTATTCCCATAAACCATAGCGGCCCACATCACCCACAATGCTCTCTG CGTCTGCTTTATAGTTGCGTGGTGTTGGTGAATCAGGGACTGTCTCCACG ATAGGTTTTTGTTGTGATTGTTCAATATATTGTCGTTTCTTGTTGGTCGA AGGTTCTTTTTGTTGAGGGAAGGATTCAGCTAAGATTTCATCGTCTTCTG ATTTCAAAGTATCTATGGATGAATCAGAGACATCAATTAAAAGGTTTCCA TCTTATGCTGTATGGGGTGAAGTTTGGACAAGAAAGTTTGTTCAAACTAA AGAAGCTTAAATCAAAGAGGTCCGAGCTATGAAGAGTCTACTATAGTAca cttattcatgatattcgtgCGTTTgccaatacacgctttttttttataag aatggtgtaaatccatttcatcatggatattcttaacttttttgggaaaa tcatcctaaaatattcttacagcattNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctagatttaacatttagta catacgtctcaaaattccatgatggtgatattcttagcatattcttaatt ttttggtcattttcatcatggacattcttataaagttaaaagtgacgtca aaaaagcgtgtagttgtGTTCACTGTTAACAATTCAAAAGTTCACACAAC GATCAAACGcgcaaattgacaaaaaaaattatagtgCTGCGGTACAACCa ctttaaaaaatgataaaaccaAGCTAACGTTTTATGTGAGATAAACTTCT TGCTGTATCTCTTTAAGGCGGCCATCTTGGCTCGTCTCTCTTATGACTGT TAATCGTAAGTACGGTTTTGTTTATATTCGAAATTCGTAACAAACATCCG GTTTTTcaggtgcttccgtataaaacattacgtcgtgAATATCATGATTC AGCATAAGACAATAGATCCGGTAATTATCACAGCAGGACATAGAAAGTAT CTTAGATCGAATTTATTGAAAAACCTTTTACCATTTGGATGCtgatgaca aaatatttttcagtcaAAGCAAAGCCTGCAATCCCGAGCTTGGAGCCTGT ACGAGCctttttttattggaattccatTTCCTTTTTAGGAAACCGATGAT ATGAAGCGACAGAAAGAATATGAAAGAGTTCTGAGAGTTGTTTTACCTCT GATCAGTCGTTTGCATTGGATGAAATGAAACGCTCCcagcagaaaaatca aaaccaaacaCAATTGATTCTTCATCGTGGAAACATCAAGTCAGTCAAAT GTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067338TCONS_00067338Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_469supercontigscaffold_469:213163..221665 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.86 3.63 1.23 0 2.25 0.87 1.98 2.1 2.74 1.92 2.32 2.23 3.19 3.98 2.5 0.99 1.7 2.87 3.06 1.25 1.3 1.22 6.32 3.1 0 0 1.19 0 2.54 3.9