XLOC_038520 (gene) - C. hemisphaerica

Overview
NameXLOC_038520
Unique NameXLOC_038520
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_358:378405..381873+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038520 ID=XLOC_038520|Name=XLOC_038520|organism=Clytia hemisphaerica|type=gene|length=3469bp|location=Sequence derived from alignment at scaffold_358:378405..381873+ (Clytia hemisphaerica)
GTGACACAATAGGAtgtattcatgaaaaaaataaaataaaaaatacaaaa
ataatcaatcagcgattcaaaaaatattgttaattGCTCTAAAGATATAA
GAAAACAATAATCGACttcttttcaccaaaatagtGATTTTGGGTAACTC
CACGGTATCGCCATTCTTCTGAATGCTGTTCGTATACCACAAACTTCCCA
TTCTCAATACACTGGTCTCTTTGTTTAGGAtgcaataaaaaagatttagc
aTTTCTCAGTTCCTCTCTATTTGGATATTCCAAAACGAGACCGTTAAGAA
GGTGATTGCCATAGACAACATTTCTCCTTCTGGTAATAAGGTACAGAAGA
TCAGTTACTCCAATTATTTCTTTcctgataaaataaaaatttcttcctcC
ATGTTTCACTGACTTTGGTACTTCATTTTCCAACAATGCTGATATAGCCT
CATACCAATCTTTATACGAAGTGAAAAGATTTGATCCTGTTTCTATACCA
AGAAAGTACTTATTAGCACCCCAGAGCAGTTTATCTTCTTTAGTAGCGGC
TGATGGCAGCTGAACAATTGGCAAATTTTCAGGCAACGGATCTTTCTTTA
ACTCATTTGAATTATTGGCTTCCATCGATTCAATTTTGTGACGAAGATTC
TGTGTTGCcaattctttttctctttccatCTGCCCTAGTTTAATCTTATT
GTTGTTCTCTAAGTCCTTCATTTTCAATGCAAACTCATTTTCCTTGACAT
TCATTTTGATTTGGTATTCATTTTCTTTGGCAGCCATTTTGGTTTggtgt
tcattttccttggcAACCATTTTGGTTTGGTGTTCATGCTCTTTCGCCAA
AAATGCTTTCTCCATTTCATTGATTTTCGTCTTGCGTTCATTTTCCTTGT
TGGCGATTTCCTTGTCTTTTTCAGCTAGTTTGTTCTGCAACTCATTCTGT
TGCTTCAGCATTTCTTGATTGATTACACCTTTGTGTGAGTCCAACTCATT
CGTTTTCTTCAACTTCAAGAGTTCCAGCTCATGAGTTAACGATTGGTTGT
CCTTTTCAAGCtgcaaaatcttcattttttgttcTTTGTCTTGGTTGGAC
ATTTCCTTTTCCAACTCAAGAATTTTGATGCGATTTTCCAATGTCAATTT
TTGAATCTGTTTGTCATGGTTTTCTTTAAGTTTTGCCGTCTCAACGACGC
TATTGTCAACTTTGTTGGTGACATTTCTACCGGTAGCACTGTGTGCCAAA
TTGCGATCATCACAATGTGCAGAttccattttttgtttctttttttatct
aCATGATAAAATAGTCATTAGCTTTCAAATATCAATTTCTTGAAAACGAC
AAAGAACAATACTTTTGGAAATAGACAGTCCTGTCAATAGCTTCTagtca
taaaaaatcacaaGACAGTTCAGGAAGAAGTAGTCAATAATAGAAATCCA
TAGCCTGTATTAGCCAATACTTTTTTCCATGTAAgcattcaataaatcta
atgagagtctaaatttttttctcgtgaaagaataaaaatgaataatacaa
ttgtttgtaatatttgtcctgagcaaaatctcaaaatatttttgcgtacc
tattttccaaagttgagatatttaagttacaagtttctggcttttagtaa
gaaaacaatagaattttaacgtaagaaccgtgtaggagcccattttcaaa
tttcgatatctcaattttgtaaaattgttacagaaaaatactttgaggtt
ttaATAAGGACCACAGAAGGTTTCTATAATCTAACCATCTGACTATCtct
ttaaattcattttcagaAGTAGGATTTCTAGCAGAGGGTCAATTCTTAAT
ATAAGACAGTAATAAATGTATTAaatgtgaagaaataagaatgtctgccc
aactatattcactcaggaaATTTGTGTGGCAGgtatatgcatttcgtcct
tattgggACTCATCAGCACTGCGTACTGCACCCTCACTGGCCGGATCGAT
TTAGCAAATCGATTTTATATTTCTAAAAACTCAGGTGACACAATATGGCG
TATtcgcaaaaaataataattaaaaaatacaaaaataatcatcagtgatt
ctaaaaatattgacatgaattatcaaaccaatcaaaattgTTGTCTCTCT
AAAGatataagaaaataataatcgacttcttttcaccaaaatagtGATTT
TTGGTAACTCCACCGTATTGCCAGTTTTCTGAATCGGGGAGGTGCTCGTA
TACCACAAACTTTCCATTATTCTCAATACACTCGTCTCTTTGTTTAGGAT
GCATTAAAAAAGATTTAGCATTTCTTAGTTCCTCTCTATTTGGATATTCC
AAAATGAGAGCGTTAGAAAGGCCATTGCCATAGACAACGTTTCTCCTTCT
GGTAATAAGGTACAGATTATCATGTGCtccaactttttcttttctgataa
aataaaaatttcttcctcCATGTTTCACTGACTTTTGTACTGCATTTTCC
AACAATGCTGAAATAGCCGCATACCAATCCTTATACGAAGTGAAAAGATT
TGATCCTGTTTCTATACCAAGAAAGTACTTATTAGCACCCCACCAGAGCA
GTTTATCTTCTTTAGTAGCGGCTGATGGCAACTGCTGCACAATTGGCAAA
TTTTCAGGCAGCGGATCTTTCTTTAACTCATTTGAATTATTGGCTTCCAT
CGATTCAATTTTGTGACGAAGAGCCTGTGTTACcaattctttttctcttt
ccatCTGCCCTACTTTAATCTTGTTGTTGTTCTCTAAGTCCTTCATTTTC
AATGCAAACTCATTTTCCTTGGCAGCCATTTTGGTTTggtgttcattttc
cttggcAGCAATTTTGGTTTGGTATTCATGCTCTTTCGCCAAAAATGCTT
TCTCCATTTCATTGATTTTCGTCTTgcattcattttccttgttgGCAATT
TCCTTGTCTTTTTCGGCAAGCTTGTTCTGGAACTCATTCTGTTGTTTCAG
CATTTCTTGATTGATCACACCTTTGTGTAAGTCCAACTCATTTGTTTTCT
TCAACTCTATGAGTTCCAGGTCCTTTTCAAGCtgcaaaatcttcattttt
tgttcTTTGTCTTGGTTGGATATTTCTTTTTCCAATTCAAGAATTTTGAT
ACGATTTTCAAATGTCAATTTTTGAATCTGCTTATCATGGTCTTCCTTAA
GTTTCGCAATCTCAACGACGCTATTGTCAACATTTCTACCAGCAGCACTG
TGTGCCAAATTGCGATCGTCAAAGTGTGCAGAAtccatttttatttcttt
tttgatcTACATGATAAAATAGTCATTAGCTTCAAAATATCAATTTCTTG
AAAACGACAAAGAACAATACTTTTGGAAATAGACAGCCCTACCAGTAGCT
TCTagtcataaaaaaatcacaagacAGTTCAGGCAGAAGTAGTCCATAAT
AGTAATCTATAAAGTAGCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061391TCONS_00061391Clytia hemisphaericatranscript
TCONS_00061392TCONS_00061392Clytia hemisphaericatranscript
TCONS_00061393TCONS_00061393Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_358supercontigscaffold_358:378405..381873 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.64	1.46	1.69	1.43	4.22	3.69	4.87	5.37	4.28	7.93	2.24	3.25	9.12	10.43	18.14	18.08	9.77	9.4	15.82	15.03	8.26	7.83	12.44	14.18	12.86	11.67	22.46	22.1	8.59	5.67