XLOC_037911 (gene) - C. hemisphaerica

Overview
NameXLOC_037911
Unique NameXLOC_037911
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_339:225041..228982-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037911 ID=XLOC_037911|Name=XLOC_037911|organism=Clytia hemisphaerica|type=gene|length=3942bp|location=Sequence derived from alignment at scaffold_339:225041..228982- (Clytia hemisphaerica)
CACTTTCTTTGAATATTTTTTTGTTTTCGTCCGGTGTAATTTTTTTGGCT
CCTTGAACAGATGCCAAACCAAATACTAAATGGCTGTTCTTGTCTTTGAG
CTGATCGTAGTTTTTTTATCATAAATGGATTCATTTACACAAGAACTTTT
GTAGCAATTTTAGAAAAACAAACGAATTGCTTCATTAAGAAATGAGATAC
AGTTACCTTGAAACTTATCTTTTCTTTATTTACAGCTAAAATAATTAATA
AAAAACAAAGAAAGAAAGGATATGGATACAATAGACAGTTGATTCACCTG
GATGGGCCAATCACAAACCTTTCACCATGGCAACCGGCGAAGAACATGAA
CTGATTATTTTCAAACATGGTAACCATACAACAGAGTTGACCGTCCTCCA
AGAGTTGGGTCGTGGTGCATTCGGACAAGTTTTGCTCACACTTGACCCTG
GCGGAAAACGTTTCGCAGTGAAAAAAGTCGAATGCAAAGATGCGAACACG
TATTACACGATCGCCCAAGAGTTGTCGGTGCTTACCGAACTTCAACACCC
GAATATCATTCGGATGTATTCGGTGGATTTCGAATTGAACATGTGTTATT
TTGTAATGGAATATTGTCCAAATGGAACACTTAATGACCGTTTAAAACAA
CCGGTAACCGAGATCTCCCAGTTTCTATGGATGTCGCAATTAACAAGAGC
TCTGTTTTATTTACACCAGAATAAAATTGTTCATCGAGATTTAAAACCAG
AGAACGTTCTCTTGAAAAGTGAAGATGAGTTGAAATTAGCGGATTTTGGA
ATCGCCAAAAAGTTTTACGGTTTATCGAGAGGGCGTTTTCCAGATCAAAT
GGCACCCAACGAGTATTTGTCAGATTACTTGGAAGGTGATACCCGAATGG
GAACATTCGCCGGAACACCGTACTGGGTATCACCGGAAGTTTTCAACCAC
AATTATGATGAAAAGGCGGATGTCTTTTCATTGGGCGGAATTTTTTACGC
CATTCTTTTTCGAAGTTCGTTTTATTATGACGGGAAGGAATTTTTTGGTG
TTTTTGTAAAAGATCGGTATGGAAAGGAAAAAGGATTGGGTCTAGCCATG
TTTGAAGAGGAGGCTGAGATTGACCCATTTGACGCCAATCACTTTGCTAA
TGAAAATGTTGATGACGATTTGAAGAAAATTGTTCGAAAAATGTTAAGTT
ATGATACAAGTCAAAGGGCGAGCATGAAAGAATGTTCCCACGAAATCGAT
AAAGCTTTCAACAAATTCACTGGTCTGTCAAGTGAAAGTGCTGCTGCTTG
TATAGAAAGAGAAACTAAGGAGAAACCTTACCCCCGACAGCCGTCTTCAT
CGACACGAAAACGAACCAAAAATCCTTCAACCAGTAGCACTGCTATGGAG
GGTCATATCGAACATTTGGCTGAATTTAATGAGAAAGACCCTTTCATGAA
GGAAACGAAAGAAGACGAAGAAGATATGGAGAATGGAGGGTGTCTTGTGG
GTTGCCAACAACACACTGTCCAAGGATGTCGGTGGTACTTGGGTTGCATG
CTCGACTTATTTGGTAAGTATTTTATTGGTTTCCACACATAGGGCGTCTG
GTCACTTAGACTTCATTAGACCTTTTCATAGGAAAGACATTGATCAAGTC
ATAAAATTTCAATTCTGAAAAAGTGAATGTCAGTTTCCATAAACATTTGG
AAGTCTTGAATTAATTACGAAAATGTCTGAAAAATAAACTTCTCTACAGG
GGAGGGACTGCAGACGCAGGATACTAACCTATAGGCTATTAACCTTGGTT
TTCAGAAAAAGTTGTCTTATCACCAGCCATTTTTTAGTACCGGGTACAAA
CTTTTTCTGAGAACAAAAGGGACGGGGATTTTCAAACGTTGGAAGTTCGG
ACAATTTAAGTTCGGATGCAATTTAATGTTCATTAATGTTATTTGTTACT
AATTATCAAGAAAGAAACTTTGTTCTGATTAGAGTCTTATCTCTAGTTTA
GGTATAATCTTATTTCTTTTTTTATGATTTTTGTTGGCGCCAATAAGTTT
ATACCTAAACTATCTTATCTCTGTAATAATACCTATCCGAATCACTATTT
TTCTGCAGGCTGTCAGAAGAAACGGGATGAAGGCGATCAAGATGAACAAA
TTTTTCCAGTCGATGAACATATGTATAAAGAGCATGTTAACGTCAATGAA
ACCTCTCGTAAGCCTTTGCTTCATTGAACGAAAAGTCTTCAATGATCACA
TGAACATAACTAGACTTACTTTGGAGCACTACAATTGGATATGGTAATAG
AAGAGTCAAGTCACAACAAAAGTAGAAATCTTCAACCGGTTTTTTTTTTT
TTTGCACGAGCATACTTTATCATCCCTTTCTTACGGCGACCCTTAATCCA
CTACGCTACTGTCACTGTTAGAACTGGCCTTTACAGGTCCAAAAATAACG
TCAAAAAAGGGCCGACCTGAAAAGAGCTGATAAGGTGTATATTGAACTTG
TAAATTCTACAATTGTAAACGTTTAGGATTTTTTTGGAAAATATTAGGGA
AATTTGAATATTAGGGATAATTTTGGTATTGGTTAACCTTTAGTAAAGGA
ACCTGTCTGACAGACATTGTCAGAAGCTGTATCTAAGATGATGATTAGTT
GGGTTCCCCCTGGACGATGTCTTTGAAAGCGTTTGCGGTGTTTTTCCTTC
GATTAGTACTTAATACCTCAGAGTTTAGGAATGGAAAGCAATACATAATA
TAAATCGGCCTTTTGAGCCTTAAAATGTTTCTTACATGTTTCTAAACTTT
TTGACATAATCAGCCTTATGAAAGGCTGGATTGGAAGGTTGTTAAAAAAA
CCGAATTAAAAAATGTTATTTTCTCATTCTGAGCCTCAGCATGTTTCTTA
GATGTTTCTTACTTTTTAGGCATTCTGAGCCTCATGTTTCTTAAAAGTGT
GTTTCTTATAAAAAAAAAAACGTGTACAACATCCGTGAGTGATCTATGAA
CTGTAGCTCCTCCAATGTTGCATACCTCCTTAGATTCAAAACCTGTGGTA
TCCCAGCTGGCACAAAACCTTGTTTCAACGTTTATCTAACGTTCACAACG
TCCATAAACGTTAGATGAACGTTGAAACAACGTTGTGTGCCAGCTGGGAT
TCAATATATTGGCAGTTGCACGACTCAATTTAAAACTAGGTTTATTTCTC
ACAGACCCTTCTCACATATCAACCACAGACCCACTGAGAACCCTTTTACC
AAAATATCGTCCTCAGTGGGAAATTATACTACCAATAAAATATATTCCAA
TTTGTGTCTCCATTGAATGAAAATAAACCAATCCTGACTGTAATGCTGTT
TCTCATCCCTACTGAATATTTTGACATGAAAACAATCGAATTTACATCCC
AAGTCATAAAAAATATAGGAATATCAATCCACATCGAGTTTCAGTTCGTT
ATTTTTACCCCCGCTGGCTTAAAAAACCCTACCGGGTCTGTGAGAATAGG
GTGTCTTTGTAGTAACAAAAAGTTAATGTTAATAGAAAATTTCGAGATTC
TCGTGAATTTTTATAAGGATAAACTATATTAAGAATTTTAAGGCTTTACG
GATTTTCTTAGGAAATCGCACAAAAATACTCACAAAATGGTGAAAATAAG
AACATCTTAAGAACATTTTTGGGCTTGATAATCATAAAGTTAAGAACGAA
AATCTTATGGAAGAACATGTATTCGTATTGGGATATGTATGAATGCTTTG
AGCACATTTTAGGAGGTGTTTACGATACGAGATTTGTGTTAAAAATATCC
ATCAATTTATGGAATGAAACTTCACCTTGAATGGAACATTTATTTATATT
TCGTATTTTTTGTAAATTTGTTTTATCTTTTAAATACTTTTTCACTACTG
TACTTGCACAATTGGGAAATATTATCACAGTTAGAAAATGTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060271TCONS_00060271Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060271-proteinTCONS_00060271-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_339supercontigscaffold_339:225041..228982 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (3.79 tpm) - - (19.66 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.36	8.52	4.19	3.79	10.04	7.19	9.67	10.51	8.84	9.29	8.06	6.74	12.83	10.92	11.72	13.32	11.97	11.06	14.88	19.66	13.13	11.96	12.61	13.44	16.63	16.26	9.59	10.43	6.33	6.3