XLOC_037449 (gene) - C. hemisphaerica

Overview
NameXLOC_037449
Unique NameXLOC_037449
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_328:40431..50939-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037449 ID=XLOC_037449|Name=XLOC_037449|organism=Clytia hemisphaerica|type=gene|length=10509bp|location=Sequence derived from alignment at scaffold_328:40431..50939- (Clytia hemisphaerica)
ATATAGGGATAATACAACACGAGATATTACACGCTTTGGGCTTCAATCAT
GAACAATCACGAACGGACAGAGATAACTTTGTTGAAATTCAATGGGAAAA
TATCCAGGCTGGTAAGATTAAAATTTTTTCAATCGTAGCATATGCTCAAA
TGTTTTCGTGTTGGTTAAAATTAAATGATTGAGGGAGAAATGTTTGTCGA
AACTTAGTCAGTCATTATAAAAAATCCCAGTCTGGTAATGTACAGGGTGT
CCCTAATTACAGTATCGAGTTTGAACATGTGATTGAGTAGAAAAGTTTGT
GTGTGTTATCGCTAAAATATAAGAACGTTCTCCATCACACAGGCTTATTA
CAAAAGGTAGTTACAACATATAAATTAGTCGTAATGACAAAGAAAAAAGA
GGGAGAGCTTAAAATACAATTTTGTGAACACGCACATAAAACTTTCTACT
CATATTTGTGTTTCGACTCGATACTTTAATTAGGGACACCCTGTACAGAA
AGTTCTTGTTTGTGTTTCACTAGATTTGCAACGTTTATCAAAGGATCTCT
TTGTGTCATATTAATTGACACATATTTTGTGAATAACTTTTACAAAAAAA
CAAGTCTAAATAATTTTAACGTTCATGAAAACTGTAAACAGAGTTAATTC
TTTTTAACCATAATGAATGTTGTAAAAATGATTATTGTAATGGTGTTTAT
TTTTTAACATTTTGTAAAACACACGCAGCAACCTTTCACTCAGAATCATG
TTCGAACTCGATACTTTTTTTCGGGACACCCTATACAGGAAAAGTATCAT
ATGAAAATAGTTCAACATTTTACCCAGGACCACAGAGGAATTTTACAGGC
CAATGATGTCAAAACATTTGATTGTCCGTTTAACCCTACCTAATGAGAGC
TATTTGGGTCCCTTAGAACTGAAAGGGGGGGCACATAGTGCCCCCCGTGG
ATAACTTAGGATAGGAACATTATTTGGTCATGAAATTTGGTACNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNACAATGTACTAAATGGAAATTAAAATCTAA
ATCAACAATTTTGTCGTGACGTTCTACTATAGCGCGCCAAAACCGAAGAA
AATGTTTTAAACTTTCAAAACCGTGTAAAATCAGAACATTTCAACTTTTT
CAAGTCTGTGATACTTTTTTTGCCATATTTATATTTATTTTTTGCTGCTA
ATTCTACTTTAAGATGTAATAGAAGCAGTACAAATGAAATGGACCATTAA
AGTATACCTGGTAACATGTTATAGTATCTTGAAGTAAGCACATAAAAAAG
AGCAAAATAGCCTGCGCTGCAGTTGTGGGATGGTAGTGGTCACCGACAAA
CCTGTCATTAAGACTAAAATAATTGACCAATGAAAAACATTTTTTAACCA
AAACATTCCCCATAAAATTTGATGAAAAGTCATAAAATTTCAGCTTCATA
GCCTCACTAGTTAAAAAATCCCAGCCAATTTTCTAACGGGGGGGGGGGGG
GGGGCCCCAAACCCCCCCCCCCCCCCTGGGGGGGGGGGGGGGGCCCCAAA
CCCCCCCCCCCCCCCTGGGGGGGGGGGGGGGGCCCCAAACCCCCCCCCCC
CCCCTGGGGGGGGGGGGGGGGCCCCAAACCCCCCCCCCCCCCCTGGGGGG
GGGGGGGGGGCCCCAAACCCCCCCCCCCCCCCCTCACAGTAGGTAGGGTT
AAGCATTTGTATCACAATTTGTAATCTCATGGTTATGAGGGAAATTCGGG
ATAAATTTCCCGAGGACAATCTTGATATTTTTAAAATTTAAAACATTTCG
AAATTGGACCGAGGTTAATTTATCCAAAATTTCACCAAAACAAGCATGGG
ATTCCTGGTTAATGTCATGGTTTAGATTGAAATTCTAACAATCGAATTTC
AATCAATCATGAGATTATTGTTTTCAATTCACTTTTAGGAAAGGAGAGCA
ACTTCAAAAAGATGAGTGATATGACTTTGGTTAGCCAAAAATCGGTATGT
AGCTTAAATTATCTTAACATTTATTTAATATCTATTTTAGGTGAGATAAA
TATTTACTGGTTTTGATTGTACAGGGTGTCCGGAAAAAAAACTGACAAGT
TTAACCCTTTAAGTCCCTTTAAGTCTCTCTAAGTTTTTTAAAGAAAATCG
CTAGTTCAAACTTTAAAGGCTTATATCTCCGGATCTAGAAGGAGTGAGAA
GCTCGTTTGCGGTCGGTTGGATAGCTTAGAGTCTCCTCTTTCTTTAAGGC
GCCACCCGATTAAGGAAGGGCGGGGTGGACGGCAGCTAAGGATGGGGAAG
GTAAGGGATCAATTTAATCAGAGCCAAATTGGGAGGTTCTTGGATCACTC
GTTGACCAAAAATGATTAACAAACGGTAAAAATCTTAAAAAAGTGGATTT
TGTCAAATTTTTGCATTATTTTGACTTATTAGCTTAAAATCTCGCTGAAA
AGACTCACTTTTGATTTTTTTTTGCTTGGTCATCTTTTTTAAGATTTATC
CGTTTTCTACGAGTTAGACCAAAAATGACAATTTCTAACTCAAACTGGGC
ATACTAGCCCATGTCTGATATATACGACACTGGCACTTAAAAGGGTTCAA
GAAGGTGAATAAAAAATTTGAAAATGTGATTTTGTTGGTGTTTTTCAGCT
TTTTTGACTGAGTATTTTTTAAAAAGAATAATTTTTGCATTTTTTTTTAA
AAATACGTCGTTTTGTACATTTTTGTGCGAGTGTCACGTGGTTTCTATAA
TTTTGCTAATTAATTAACGAAAGAAAAAAAAACGAGAGAAATAAATTAAA
AAATTAAGTCAAGTCGACTTTAAATAAGCTTTCGAACTCTATAAATGAAC
CCCCACTTTATACAGAAGAAACGATAACATTTTGTGCTATTTCACATGAA
ATCATTATTATTTGAATTAAGAGTGGCAGCAAATTAACCCGTTTTTGTCG
AATTTTAAAATTAGGGTCGGCAAAATTTGCCATACTCAAATGATCGAGTC
GAGTTTAAATAAAATTTTGGTTTTAACGACGCTTTTTTTGTTGAACTAAA
TTCAAATTAGGAGTTTTTGCACTTTGCTGAGTTAGGCAAAAGAGCAGTTG
TATAAACTACGCCTAATAAGCTACGCCTGAGTTTATTTTCTATGATGTGA
TTAGAAAAAAATCCAAATTTTTATTTACACAACAAATGATAGATCCACTA
TCTAAAAAATTCCCCACAAACATGAAGAAAGCAATACAGAGCTGTTAATG
AAGGCCAAAAACTACCTTTCCAAAAGAAAAAGTTTAACAACTGAACCCAA
AACTAGCAAATCAATCCAAAGAAAAATATATAAGACAAAATTAATAGTAA
AGATTATCGATGGAAATAGTTCAAAACAAATGCTCGAATACTACCACTGT
CCAAACCTAGTGTAAAAACTGCCACTTAGTACACATCCATCGACCCAATG
CCACACACCTAAATAACCATTTCCATCCGACATACACATGAAAAGACAAA
TCCAATAAAATGACAAATCCGATACCAATATTGTAAGGGTACATAAGTAG
CTCAGTTTCGACCCTTGTTGCTGGACTGACTTATGTCGAGATAAGCAGCT
AAAGTAAAATGAAATTAGGATTGGAACTGCGCTAAAACTTTCAATAAAAT
AAAAATTCAATAAAAATAAACACACTATCATGAGCAATCACTTGTTTATT
TGGCAATGTACTATAGCACTCCCTAAAGACGCTTTCTTTTTCCGAGACAA
TAATAAACGTTTTGATCCAAAGTCTTGATATTCAAGCTGGAACTTTTTTA
ATTTTAGCAGAAAACAATATAATTTTAACGAAAAAACTGTATTTTTAGAA
ATTGCAAATTGTAATATCTCGACTTTGGAAAATACATTAAACAAAATTGG
GTGTCTGGTATGTGGACGAGATAGAGTTTTTACAAGCTCTTATTTGATTT
GGTTGGTCCATACACAGTAAAAAATTTTCGATTTCCAAGGTTGGAAATTC
AATATTTTTGGGTTGGAAATTTTGGTTTTATAATTGAAGGTTGGAAATTT
GAGTGAAATTCTTCGATATCTCTTCTGTTTCGCTGTTTTCATAATCAAAC
ATAACCTAAGGGACTCCTTTAATCTAATGAGCCTCTTCCCTGGANACTTC
CGTTTCGCTGTTTTCATAATCAAACATAACCTAAGGGACTCCTTTAATCT
AATGAGCCTCTTCCCTGGACTAAAAACCTAACCTCCCTCGAGGCTACAGG
GGTCAGTCTAATTCGCCAATCTGACGGATCTTTTGGTAGGACAAAAAACC
TTGGTTCGTTAATAAAATAATAAATCTCTTATTGTCTTCTTCTGTTCTGT
TTCGTTCTCCTCCATCGCTTGATAGGTTATTCGGTCCCTATATTGTCGGC
AATCGCCGTATGTTCATACGAATGAAAATTAATGTAATCGATTAATGAAG
TTTAAGTACACGACCTTGCGTTGCAAATAAGATGTCAAGTCTACACCGTT
CCTCCCTTTTATAACGTTTTGTACCATTTTCTGCGCATGTCCTTTGAGAA
AACCACAAGCAATTTTTCGCGCAGAACTATCGTGATAGCAAACCTAGATA
TTGGGCTTTAACGTGAGCAGTCAAGCTATAAGTTTCCGTCAGGTGAAGCA
TCCCTTCGGAGCGGCCTCGGTCAATCGCAGTGAGTTCGCACAGTGAAGCA
CATAGGGTACTTGTGTCATAGTTTCAAATGGTTCTCTCCTGAGCTGTGTG
AGTATTCTAAGATCAACCACGTATCTGTGCGAATAATAACAAGATATTGA
CCGGGAGCCATCGAGCCTAGGATAGCAAGTGACTGTTCACAAGAAAAACC
TTGTTTAAGATCTTTCTTTCCACATATCTGTCATCACTTTTTGGATTTTG
ACTTTTTTTAACCTGGATTTTTGAAAATTCCAACATTTTTTAGGTTGGAT
TTTGGTTTTATTCAACCTGGATTTTTGAAAATTCCAAGCAATGGAAAATG
CAAAATTTCCATCCTTGGAGAGTGTCCTAAGTTTCCAGGTTGGATTTTCC
ATTGGATTTTTTCTATTTTACAACTAAGAAATCTTGAAATCTTCAACCTT
GGAAATCGAATTTTTTTCCTGTGTTAACCAGCAATAAAGTTACTTTTTTC
TAATGAACGCTTAATTTTTATTTGTAAAAAGAATAACCAGAAGCTTCATG
TTTTTGATGTTTTTAATAACTATACTGTGTATCCAGAAAAAAAGTATCGA
GTCGTACCACTTTTATAGGAAGAAAGTTCTTTTGCGTGTTTCACTAAATT
TGCAATTTTTATCAAAGTTTTTCTCTGTGTCATATTAATTGTCACGAGAC
ATCTTTTATGGAGAACTTTTACAAAAAACAATTCTCAATAACTTTAACGT
CATGAAATTGTAAAGGAAGTTAATTCTTTTTAATCATACTGACTGTTTCT
ACTCAGAATCATGTTCCAAATCGATACTTTCTCTCTAGACACCCTGTATA
TTCGACGTTCACTACAAGAGGTCATCTTCAGAGTAAAAAATCTAATAACA
AACGAAATCTTTTAAAAACTAATTTTCAAAAATGACCAGTAAAATAGTGC
TAAAAATACAATTACAAACAATGCGATAAAACGATAGAAAATAAACCTTA
GGGACTAAAATGATTGAAACGTGCAAATAAGAAAGTATCGAAAAGTAATA
ATACAAAAAAAGCAAAAAAAGTTGCAAAAAAGAATATGTCGTAAAAAGCT
GTATTGTTTTAAACAAATTCTGTACATTAAGTGTAGGTTTCTGATCGATG
ATTAAAAAAGGTTCAGTCATCTTTCTTATTTCATTGGGTGCTTTTTCACT
ACGCTAGATAGATAAGTGGTTCTCATCGACGGTCCTTTCCATAAATTTCT
AAGGANGCAAAATTTTCTACTTTTTCCCCAAATTTTCCAAAAATAGGCAC
CCTACGAGGGACTGATTTTTCTAAAAACCAATCCTGTACATAAAGTGTAG
GTTTCTGATCGATGATTAAAAAAGGTTCAGTCATCTTTCTTATTTCATTG
GGTGCTTTTTCACTACGCTAGATAGATAAGTGGTTCTCATCGACGGTCCT
TTCCATAAATTTCTAAGGATTGTAAAAAATATACAATGAAGATTCGTGCT
TAACATCGGATTTTGATCGCTTCATATCAGCATTCCATATTTAACGTCGA
AAATTGGTCATTAAACCTTTTGTCCTCCAAGAGAAGGGTAGACCTCTCTT
GGCTTAATGACCAATCAAGCGAAAAAGGCAGCATAAATAAATTGGTTGCC
ATAAAAGTAGCAGAATGTGCAGAGGGATTCTTTTGTAAAAAATTGGTCAT
ATGGGAANCGTTGCTCAAAATGCCAACGAAATGCCAACACGTTGGCATCA
TTAGGCATTTGACAAACCGAACAATTGCGCGGAACAATAGAATTCAAAAG
AATACTGCAANGCCGATAGAGGCTGCGTTTACACCAACTGGCATTTGTAA
TTTGGCATTTGCTCATGAGAGATTCGATTTTAATAGCTTTTCCATTGTAT
TTTCTGTCATGGCATTTAAGGAATNTGAAGAGCAAACTTTCATCTGTATT
GATTTGACACAAAAGACGAGGAATCTTGTCACAGAAAATGTTCATTAGAA
GGCTGCAATTCTAAATCCCTTGATGGTCCTTGATATGCGAGTTGATGATT
TTTAATAAAATTTTCTTCAAATTCAAAGGGTTGTAAACGCTTTGACAACT
GTTTTGGGAGTCAGTAATTGTTTCCTACCAATTTTCTTTGTTTCAGCTAA
TCGATTTTCGCCAGACAGTCTCAGTGAAAAAGCACCCATTCTTTTTGAAT
CCCTTGGCAATTGTTTTTTATTAGCTCAAATGACCGATTATTAAAGTATC
TTTCTCTATCTCATTTGCTGATATGTGCGATTCACATCCTCGAAAGTCTC
TCTAATAATGGCTACAAAAAACCAATTTTATCTCTAAAAGGGACCAAAAT
GACTTTTAAGGGCGGAAGGGCGACACAAAGCCGTACCTTCATTTGCCGAA
AGATCATGATGTGGTGGAATTTGACAAAAATCTTTTGGGAAAAGTCTCTC
TAAGGGCCCCAAAAAAGTAGATTTTCTATTTGTGGCCCGAACACACCCGT
CACCTTCTCAAAGCTAATACCTACCCTGAGTATCAGAGGCTGATTTTTCA
AAGAACATTATAAACATCTGACGACCAAGTATAATAGTTTTTATTGTAGG
TTGCGGGTTGTTCTAAATCGTGTTAGCCACCCTTCGTCCTCATAAGCGTA
AATACATAATCTCGGGTATGATTTTGGTATATGCTTTTCACTGTAACTAA
TACCCCACCCCGAAAGAGATTTTACTCAGGACCACGGATGGTTTCTGCAA
GCCAAATATCTCAAATCATCTGATTAACCCTTTATTTATTCACCAGAAAT
ACGATTATGAATCAGTGATGCATTTCTCGAATAAGACATTTTCATGGAAT
GGGAAAGAAACAATTGTAGCCGCCAAAAATGCTATTAATCCACCTGCCAC
TTTTGGTCAAAGGGATCACCTAACAGAATTGGATAAAGAAGAGTTACGAG
CAGTCTACGGGTAGGTGTCAGTAATTGCCATTGCAGTGAGCCTAAAGTTC
TTTAGGATGGCTTTCATAGTTTCACGCATACCATAAAAATGTTTCAAACA
ATTTCCATCCCGTAGAGTGGCTGATTTAATTTCTTTTTGATTTTTTTTTG
ACCCATAAATATACTTTTTGAGACAATAAAACCAACCCTTGCAGTTCGCA
CTTACTCAACATCCATTTTTGCCTAACTACCCACTCCCCCCCTCGGGCAC
GCATAAGAAAGATGGGAAAACATCGTTTTTCAGTATTAATAATATTTCAT
AAAAAGTGTCTCGGTAGCATTCCTGTCTTAACGGTTACTCCATTACTTTT
TCTGAGTTATTTTTATCTGATCACCAATAGCAAAATAGATATAGATATGA
GCCCTCCGAATGCATTCGGGATGGGTCCTACCAATGAAGCAGTAGGAATC
ACAGCGCTGCCAAATACTGCAACTTGACAGACGCGAGCTGCCAAGCCTGG
GCGTATACCATAACACTCGAACGAAACTGGGAGAGCGGTGCTCACGCTAG
GCCGAACCTCATGAGTGTCATGGATCGTCACAATGTCTGTCTAATCTACA
CACACTCTTGTATCAGAGTAATGGTACCCAATTCCCCTAACATGGCATGG
GTTGACCCAGGCGAAGGTATATTCACTTGCCAAGTGAATCGTAGAGACAC
GGTGGGTATCGAACTCGTGCCTCCCAGGCGAGAGTCAAGTATGATAACAT
TATACCACTACGACTAGCAAAAGTATTAACTAAGATAAGTGTGCACTCTT
TTTTTTTAACTATAACTTTTGAAGGAATTCTTTAATCTTTATAAATTTGG
TATCGTTGGAGAGATATTTGTCAGATGGAACAATTTGAAATAGAAAGATG
TCTTTAAAAAAATTCTAAAAACGAAGACGGAAAGAAGAAAAATGAAGATC
TTGTAGAAAGGTGCTATAACTTTCATTTTCACTGGAGAGATTTTTTGACC
TTAGGAGGTCATCACTGTAAAGTAATTTCACTAAAATATTTATTCAATAT
AAAGTTATGATTCAAAGTTAATAAATGGTTGACCCCAAAAACAGCAGAAA
ACAGCAGAAAGCAGCGTTTTTAGACGTCAATCAGCTTCTAACTTTGTTTG
ATATCTTTTGACTGAATGGTTATTTTTGAGATATTTTTTCACAATGATGA
CGTTCGATGCTCAAGGATTCATTTCAGTGAAAATACTAGTTATAGCACTT
TTCTACAAGATCTTCTTTTTTTCTTCTTCGTTTTCATCTTCATTTTTAGA
ATCTTTTTAAAGATTTTTTTTATTTCAAATTGTTCCACTCATTAATATCT
TTCCAATGACACCAAATTTATAAAGATTGAAGAATTCCTTCAAATGTTAT
AAAAGAAAAAAGAGTGCACACTTATCATAAATAGTAATTAATCCCACCTT
TTATTACCACTAAATAATGAATATAAGAAGGTGCCCTTTTATTGGTCAAG
TCTCTTTATTAAAAGCAAGTACTTAGGTAAGTCAAAAATGTATGTCTCAT
ACAATATGTGAGAATCGTTACAGTTAAACGATATCTTCAAGAAGAAGAAC
TAGTAAGATTTTTGCCTTCAATTTCTCATGCTTCAATACTCTTGTCTCCC
GAATAGACGTCCCTCCGCTTATTGTTAAGAGAAAAAAAATCCATCACCCC
GCTCTTATTAAGACCCCTCGCTAATTAAGACCCCCCCCGCTAATTAAATT
CAATCCTTTTCTATATTATTTGGAGCGTATAATTCATTTCCAGGACAGAT
TTCCCTTCAAAAAGGACTTTGAAAAAACTTTTTAAGGTACTAAAAACATG
AATTCTGTATTGCTAATTGTTTCAACATGGTATCCTCATGTTTATGTTTC
CTAGTCAGGTTCTTACCGTAAATTTTCAAATTTACCATTTTAAACTATAG
CTGCTCAGGCTCGCCTCCTCCATCAACAACAACCACGACGACAACAACAA
AAAAACCACCAACGACTATAATAACTCAAAAACCTCCAACAACACATTTT
ACAGAAGGACCGACAACAACAAAAAAACCACCGACGACTACAATAACTCA
AAAACCTCCAACAACACTTTCTACAAAAGAACCCGGAAGACCAGATGAAA
ATCTATTATGCAAACTTGTAACAGGTGATGCAGACAATGGCACGGTGTGC
AATGCTACAAACTTTAATACAACAAGTATCAAACGAATATATGGCGACGG
TAAGTTAATATTTACACATTTCATCATTCTACGCTACTGAGGTGTTTCAA
GTTCACTGTTACATAATTTCCGCCACTGTACGAAAAAAACCGGTGAGGTG
ATCATTAATGGTCTGTTCTGACGAGACAGGGTTAAAATCACGGTCATCTA
ACATGTTCTTTTATTGTCTAAGTAACCCTAGAAAGCGTCAGAACAATCTT
TTGAGGAGACAGTGGTATAATCAAGAGTAAGATAGTATAGTCTTATTGCC
AAGTAACCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059487TCONS_00059487Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059487-proteinTCONS_00059487-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_328supercontigscaffold_328:40431..50939 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.16	0.12	0	0	0	0	0	0	14.39	10.08	0	0	0.09	0.04	15.71	29.75	0	0	0	0	0.06	0	0	0	0	0