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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001372 ID=TCONS_00001372|Name=TCONS_00001372|organism=Clytia hemisphaerica|type=transcript|length=1513bp
CCTTTGTGGTGTTAAGGGCTCATAGTTATTTCTAGAATTTTGGTTTGGTT
TTCTTCTAgtgaatttttgtttacataaaTGGAATCTTTCTTTGGAACCT
TgcttttaaacctaaaaattgtAGATATACTCCTGTTATTTTTTACTTAT
AGAGTTACAGATAAAAAGTATTAATGTTAAAATCTAATGGGAAATACCTC
TTCGGAAAATACATGCACTGAGCTCTCAGTTTTATCCTGGAATATTTGGT
TCGGTACAAGCCAGAAGCTTGACCAGCCAGAGCAAAGATGGACAGAATTA
CTCAACATTGTTGTCAATAAGAACCCTGACTTAATTGGTCTTCAGGAATG
CACTTTAGATTTCttaaaagttgtcaaaaaacATTCCAGATTCTCTGATC
ATTACGTTGTTGTCAATGAGAGACCTTTATATTCCAACTATTTTGTTATg
ctttacaaaaagaaagatttgaaaatcttAAAGAAAGGGACAATCAAATT
GAAAACGACTTTGGAAAGACAATGTGAATATTTGGATGTCGAAAAAGAAG
GAGCTAAATTTCGGTTTGGTACTGTTCATATCGAGTCCTATATCACATCA
CCAAATATCAGGGAAATTCAAATGGGAGCCATATTTGATgttttacaaaa
gaaaactaAGGACATAGAGCTTGCCTTTTTGGTTGGTGATTTCAATTTCC
ATGAAACAGACGAAGAAAATAAGTTTATAGAGAGTAGTCAATTTAAGGAT
ACATGGCGGGTTGTCCATGAAGATCTAGATGGTTTCACCAAAGATTCTGA
TCATAATGTTATGAACCAAATGTTCCATGGGAAGCCTATtacacagaaaa
agaaaaggattGATCGAATTTTGTATATGGAGGACACCAATGATGTGAAT
CATTGGAAGGCAACTCAATGCCAAGTTATTGGGGATGAGATATTTGATGA
GATCGTCATGCACGATCAAACCAAAGTTTCCATGTTTCCTTCTGACCATT
ATGGTTTACTTGCtaagtttgaaaaaaacttaAGTTAGGTGTAAATTTTT
TCCCTAAAAgaactgttttgttttgattgataagGCATTTCCTTTGCTGA
TATTTCTACCATAAATcggattaatttttttgaataattttgtgTAGATG
ATCAAAAATCAGTTGAAAATGGACCTGTAGCAAATATCAAAATGTACGGT
ATATTTTACGTGGATTTAGTTTCGTAAGTCACAGTAATCTTTAAACGATT
TCGttagatttatttttttccaaaaaaggataGTTGTAAAAATGTGGAAT
TAAATCTTGCAAAATTAATCGTTCATAGTACTTAAATTGTACGAAATTAT
TTGCGAAATCTTGGGACAGTAGAACAATTTGGGAGTGTTATATTGTTGTT
ATCctatttatatttttgtatgatatgtttttctcaaaaaatttctatat
tttgtataattttttgtaattcttatagatatattataaagatttttttt
aaatgtcgtAAAA Run BLAST on NCBI transcript from alignment at sc0000010:698110..699622+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001372 ID=TCONS_00001372|Name=TCONS_00001372|organism=Clytia hemisphaerica|type=transcript|length=1513bp|location=Sequence derived from alignment at sc0000010:698110..699622+ (Clytia hemisphaerica)
CCTTTGTGGTGTTAAGGGCTCATAGTTATTTCTAGAATTTTGGTTTGGTT
TTCTTCTAgtgaatttttgtttacataaaTGGAATCTTTCTTTGGAACCT
TgcttttaaacctaaaaattgtAGATATACTCCTGTTATTTTTTACTTAT
AGAGTTACAGATAAAAAGTATTAATGTTAAAATCTAATGGGAAATACCTC
TTCGGAAAATACATGCACTGAGCTCTCAGTTTTATCCTGGAATATTTGGT
TCGGTACAAGCCAGAAGCTTGACCAGCCAGAGCAAAGATGGACAGAATTA
CTCAACATTGTTGTCAATAAGAACCCTGACTTAATTGGTCTTCAGGAATG
CACTTTAGATTTCttaaaagttgtcaaaaaacATTCCAGATTCTCTGATC
ATTACGTTGTTGTCAATGAGAGACCTTTATATTCCAACTATTTTGTTATg
ctttacaaaaagaaagatttgaaaatcttAAAGAAAGGGACAATCAAATT
GAAAACGACTTTGGAAAGACAATGTGAATATTTGGATGTCGAAAAAGAAG
GAGCTAAATTTCGGTTTGGTACTGTTCATATCGAGTCCTATATCACATCA
CCAAATATCAGGGAAATTCAAATGGGAGCCATATTTGATgttttacaaaa
gaaaactaAGGACATAGAGCTTGCCTTTTTGGTTGGTGATTTCAATTTCC
ATGAAACAGACGAAGAAAATAAGTTTATAGAGAGTAGTCAATTTAAGGAT
ACATGGCGGGTTGTCCATGAAGATCTAGATGGTTTCACCAAAGATTCTGA
TCATAATGTTATGAACCAAATGTTCCATGGGAAGCCTATtacacagaaaa
agaaaaggattGATCGAATTTTGTATATGGAGGACACCAATGATGTGAAT
CATTGGAAGGCAACTCAATGCCAAGTTATTGGGGATGAGATATTTGATGA
GATCGTCATGCACGATCAAACCAAAGTTTCCATGTTTCCTTCTGACCATT
ATGGTTTACTTGCtaagtttgaaaaaaacttaAGTTAGGTGTAAATTTTT
TCCCTAAAAgaactgttttgttttgattgataagGCATTTCCTTTGCTGA
TATTTCTACCATAAATcggattaatttttttgaataattttgtgTAGATG
ATCAAAAATCAGTTGAAAATGGACCTGTAGCAAATATCAAAATGTACGGT
ATATTTTACGTGGATTTAGTTTCGTAAGTCACAGTAATCTTTAAACGATT
TCGttagatttatttttttccaaaaaaggataGTTGTAAAAATGTGGAAT
TAAATCTTGCAAAATTAATCGTTCATAGTACTTAAATTGTACGAAATTAT
TTGCGAAATCTTGGGACAGTAGAACAATTTGGGAGTGTTATATTGTTGTT
ATCctatttatatttttgtatgatatgtttttctcaaaaaatttctatat
tttgtataattttttgtaattcttatagatatattataaagatttttttt
aaatgtcgtAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001372-exon-sc0000010-1491911889:698110..699622 | TCONS_00001372-exon-sc0000010-1491911889:698110..699622 | Clytia hemisphaerica | exon |
| TCONS_00001372-exon-sc0000010-1510915933:698110..699622 | TCONS_00001372-exon-sc0000010-1510915933:698110..699622 | Clytia hemisphaerica | exon |
| TCONS_00001372-exon-sc0000010-1575043694:698110..699622 | TCONS_00001372-exon-sc0000010-1575043694:698110..699622 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000010 | supercontig | sc0000010:698110..699622 + |
Blast
The following BLAST results are available for this feature:
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