TCONS_00015228 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015228
Unique NameTCONS_00015228
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1424

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015228 ID=TCONS_00015228|Name=TCONS_00015228|organism=Clytia hemisphaerica|type=transcript|length=1424bp
CAAAGCGCGTAATTTGGTAATTTGATCTCTTCGTTCACGTGAAATCCACC
ATATTGAATTTCGAATCGTTCGGTAAAATATACGCTGTGTCGTccaaacc
tttttcttttttctgcgATTTCTTGCTGACATCACTTTTCACGTTTTCCT
CAAACAAAGAGGAAGCAACAGGCCAACTCGAAACTGACCATCCAAGTTTC
AAAGGAAGGAATCTTCTAGCAGAAaGCAATCATGAGCAAAGCATTTGTCC
AAAAACAAGCACCTGACTTTGAAGCTGAATCTGTTTTAGCTGATGGCAGT
TTTGGCAAGGTCAAACTTTCTGACTACAAAGGAAAATATGTTGTCCTGTT
CTTCTACCCTCTGGATTTCACATTTGTGTGCCCAACAGAAATCATTGCTT
TTAGTGACCGTGCTGCCGAATTCCGTGCAATCAACTGTGAAGTCCTCGCA
TGCTCAGTCGACTCACACTTCTCACATCTTGCATGGACTGAGAGACCAAG
AAACAAAGGAGGCCTAGGTAAAATGAATATCCCACTTGTATCTGActtaa
caaaacaaatttccAAAGACTACGGAATCCTTCTTGAAGATGCAGGCATC
TCTCTCAGAGGATTATTTATTATTGACGACAAAGGAACACTGCGACAAAT
CACCGTCAACGATTTACCGGTTGGACGATCTGTCGACGAAACTTTGCGAT
TAGTACAAGCTTTCAAATTCACTGACGAACACGGAGAAGTTTGCCCTGCT
GGATGGAAACCAGGATCTGACACCatcaAGCCATCAGTTGACGAGTCGAA
AGAATATTTTGGAAAACAATAGATTGTCTTCAATCGAAAAATGAGAAAGA
CCAATATCATTAGGGACCGTTACCCCTTTGATCGAAGAACGACTTGATGG
ATTTTAAATATTAGTACTAATATATTAGACATgttgttatttttaatttt
tctttctacccaaCGTATTGTCGGGAAAGTTTAGGAGGCTGTAAGATCAT
GTCTTTTTTTAAACCATTAAAAGAACGTGGTAAGAGCATTTGCGGTTTGT
TCGTGAACACAAACTTGATCCAAACTGCCTAAAGGGGGGACATAACCact
attttatgttttgttaatgtttttatactttttgttacatattttttttt
tgctctgtACTTACTTAGGACAAATTCTATTTTCTTTAATATTATTATTG
GTAGTAGAGTAAAGAACTGTATTTCGAGGAAAACCGCTGTATTAAATTTT
TACCCAAAATTGTCCCACTAAAGTCTGCCTCAATAAAATTTGCAGCggta
gaccagcggccgaggtaatgaattgtgtcacttggtagggcaccccttag
atcagggcaaaattttgatattatgcagctaatagggtgtagaattgaca
aaaaaattgccCTTCAAATCTCCT
Run BLAST on NCBI

transcript from alignment at sc0000205:236759..244570-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015228 ID=TCONS_00015228|Name=TCONS_00015228|organism=Clytia hemisphaerica|type=transcript|length=7812bp|location=Sequence derived from alignment at sc0000205:236759..244570- (Clytia hemisphaerica)
CAAAGCGCGTAATTTGGTAATTTGATCTCTTCGTTCACGTGAAATCCACC
ATATTGAATTTCGAATCGTTCGGTAAAATATACGCTGTGTCGTCCAAACC
TTTTTCTTTTTTCTGCGATTTCTTGCTGACATCACTTTTCACGTTTTCCT
CAAACAAAGAGGAAGCAACAGGCCAACTCGAAACTGACCATCCAAGTTTC
AAAGGAAGGAATCTTCTAGCAGAAGTAATTAAATTACGTCACTTTTCTTA
ATTCTCTATAAGTATTAATCATGTTCATCCATTTACAGTCTCATTTTGAT
GTTTGTGAAAGGTGTTTTGGTTTTTCAGTAGTAGTTTGGGGTAAGATTCT
ACTTCCAAGCCAAAGACTTTTCCAGATAACTTGCATGATGTTAGGGGGTC
CTAATAAAATATAAGGTCTGGGGGTTGGAAAATTTTTGAAAAATTAACAA
GCAGGGGGGGGGAGTGTTTATTTGGAATGTATGTTTGATTGCGTTTGAAT
TAGTTTAGGTTGAGATTCGATTATGTTCGATTAGTTTGATTACAATGTTC
AATTAGATTGATTGTAATTAAATTACCTCTATGGTATTAAATTTTGCATA
ATGTAAAATTTTGCAGGTACTCGCAATTCTTTAGGTCAAATTTTGCAAAA
TTTAGTATGCTAAATTTTCAAAAAGGCGGCAATCACAAATATCTTGTCTT
CTCGTTGAGTCTAAAAAGTGAGTCGGTCGGTCGGTCGGTTGTAAGAATTT
TCGGGTTTTCATCCATCCTCCAGTGTATTATTGTGATGCTCTTAGATCGA
ATGGCCAAAAGTCACCTTATTTATTTTCTTATCCGCGCATCGCTAAAAGT
CACCCTGGAAGACAGGGGTTTGGTTATCATCAGTTAGGGTCAGTGTTGGA
GCTCGAGAGTCACAATAAAGGACCGAAGGTCCTTATAGGGGCACTCGTAC
CCTGTGGCTTTACTTTGGATCCCGAAGGGATCCTTGTAGGGGCATCAGTA
GGGCTGGGAGTTTCATCCAGAGATTTGTCCGTTTGATATAACTTTATTCA
AATTGTGGAATTTGATATGCAACGATGGCACAGTGGATAGAGTGCTGTCT
TCCGGAACTGAGGGTTCCAACCCCATACGGTGCGATGATTTGATTGGACA
AAATATGATTGACAGATCAAAACCTAGAAAACTTAGATAGTTAGAAAATA
AAAAACAAAGTCTCAGATAGTCAGAAAAGAGAAAAATAGGATAAGAGATA
GGAAATAAAAAAAGGTGACGATTGGTCATCCGATATAACATCTACCGTAT
TATTGAAGGAAACTGCCTGCTAGCCAGCAGCCAAAACAACGGCGTTTTAT
GGGTGGTTTCAAATTATGAACTTGGAACACTGTGACCGCCGACTCAAAAT
GGTGCATATAATGATAAACAAATTCAAAAAACCGGCAATATAAAATTTTT
GAACGAAGGAAACGTCATTGACAGGAAAGGTCCGACAAATTTACCGACTT
ACCGACTCAATTCTACTCAATTTTCAAGAGTCAGTCAGGCGTCGCAAAAC
GAAGATATTTGTGATTGTCATCAAATACAAAATTGCAAAATTAAATACAC
GTGAAAAATTTTAAAAATTGTCAAAAAATCGCAAAATTTTCAAAAATGAA
ATACAACATCAGCCCTGTGAATCAAGGCCGGCATTCGGCAATGCCGACCT
GCAAGCCGACGTAACTTGAGCTGAAGTCGGCTTTTATTTGCCGACGTAAT
TTACACTCTAGGTTGGCGTACCGACAAAAGAAATGTTTTGGGTCGGCAAA
GCCGACCTAAAGGGGGAAAATATTATTTGTTCGGTTAATCTAAAATTGTG
TTATCATTTGATAACACATGATAATTGAGCCTCGTTTCATTCTCTTTATA
AAACATAAAACTTATTAACACAATTATAGAGCAGTTCGTCTTTGCCGACC
TAAACAAGCTACTTAGGACGGCTTTGCCGACCTAAATGACCTCTAGGTTG
GCAAAACTTGCGTGCCGATTGTCTGAATTCACAGGGCTGCAACATGGACC
AAGACTTTCTTCTTATTTGTTACACTTAATTACCATCAGTCTAAACTCAA
ACTTCTATATCAGGATTAGAAACTAGGCTAGCCTTACCTCTTTTATCTTT
TCCTTTACAATAATACAATGCTGACAAGTTGACACAACATATGTGTACAT
GTACATTGACAAGTAATCCCTGAGAGAAGTTTATTTCAAAATCTGCAACA
AAAACGGAAATGGTCTCTTCTACTACTGATTGCTTCCCTGTGCTCCTTTG
CAGGTGTTTATCAAAACAGTATAAAGAATCACTGAATAAAAGAAGAACTT
AAAATGTTAAATATTTTCATCTTGAAGAATAGGTGCAAAAAAGTGAAACA
TAGAAAAGTTTCATTTTTCATTGCATTAATCGAATAGGGGGATTTGGAAA
ATTTTCTTAATTTTAATTTTTGCACAAACCCCTGTAATTATGTGCGAGCA
CTCCGTTGCTAAGATGTTGGCTTGAAATCGAAAATGAAACCACTCAAAAC
GAAAATAAAATCAGCCCGTGTACTCCAAATCCCGTAATCTTGATATACGA
GTTCAAGTCTATACTGACCATTATTGTCACTAGCTTTGTTAGGGGTCACT
CACCTATCGATTCTTCCCACGACTAACGCCAAATACACCGTTTAAAAGAG
TTTCACTATCTCCACCGTGAAAACGGTAGGTAAAAATGCGCACTTTAGTA
CTGTGGACCGTCTAAACAAAAGGAACACGAGACATAAACATCAGGCCATT
TGTTTTGGATAAAATTGTTCGGTGAAATAGTAAAGCGGATGAATACCTAG
GTATGTGATCTTAGCAGATCTTAGTTGATAAAAGGAGGAGAAGAAATATG
GAAAGTAACATTTGGCACAGAATAAACGTCTCAAAAATTGATATTTCTGG
TGAAATTTCTTCACGTCACAGACTGTAACATTCTCGTCAATTTGACGTTA
GTCGTAGGAAGAATCAATATGTGAGTGGCCCCTTGCTATTTTTGGTATGT
TTACACCCAATATGTTGTGTTTCAAGCGAAGTCAGTAATTTTCTTTATTA
TACTCACTTTTTGAAAATGCCCTAGAAAATTCCAAGCACTTTTTTGTGGC
TGTTATACGGCCAAGAGACTTAATTTTGAATTGAGTTTTAAAACTCAATA
TTTGGAAAAAATTTATTTTGTGTCAAAATATTTCAAAAAGATGATGATAG
TGAGCAAAATCAGAATGTAATCTCTCTATCAGTCTCTATGATGATTGAAA
ATAAATCCAATTCAATACATTTCTTTTTATTTTTACAAATACAATGCTTA
ATCCTTGAAAATAAGGGAGCGATTTATGCGAGCAAATGCAACTGAATCAA
TCAAACGTAATTAAATACAATCAAACTTAAAATCAAGCATTTGAACAGCA
AATCTTGGGTAATATTTGATTGTGTTCAATTGATTTGGCATTCCATTTGT
TTGATTGACACCGTCTGGCTATGCCAAATAATATTTAAAAAATTTGAATC
TAATCAAACAACTAAAGCAGACCTGCCAACTTGAGATATTCATTTTGCAT
GAGATAAACATTTTGAGGGAAATCCAGGGAAATCTTAGAAAGCTACAGGG
TAGCCCCGTTGGTGATCAGAAAGAGAATTTTTTGTAGTGTTTTTCTCAAG
ATCAGTCAAGATAGGCTGATTTCAATAGGGACGGCATCAGATAAATGGAT
GCCTAAAAAAATATAAAAATACACCGGTGCGTGATGATCCTTAAGACTTG
TTTATGATTTGAGGCACAATAATATTTTTCTGCTGTGCTTGGATTTTCAA
TGTAAAATTAGATACCCTTGAAAGAACAAATTCTTGCGTTTTGGACATGT
ACTATTAGGGAAGTTAATTCGGCAAAATACAACTTGTTTTCTAATTTCTT
TTTTTTANAGACTTGTTTATAATTTGAGGCACAATAATATTTTTCTGCTG
AAAGAACCATTTTGGACATGTACTATTTAGGGAAGTTAATTCGGCAAAAT
ACAACTTGTTTTCTACTTTTTTTTACTTTTTTTTTGTTTGCAGAGCAATC
ATGAGCAAAGCATTTGTCCAAAAACAAGCACCTGACTTTGAAGCTGAATC
TGTTTTAGCTGATGGCAGTTTTGGCAAGGTCAAACTTTCTGACTACAAAG
GTAAACTGATTTAAAGATCTTTTTATTAAGTGTTGGTAGCTGTCAGCACT
TTGGCACCTTTCACAATCAGCTCAATAAGCAATAAGCCCATGTCTACCTA
GGGTAAATTATCAAGCAAAAGTAAATGACTATTCAGAAATTCGTTTTTTT
TAAATGTTACATCCAGGCTATGTTATGAAATATATCTGTAAGTATAATGT
ATTTCATGTTGTTTTTTTAAATGTTACGTCCAGGCTATGTTATGAAATAT
ATCTGTAAGTATAATGTATTTCATGTTGTTTTTCATTTATCATTCATAGG
AAAATATGTTGTCCTGTTCTTCTACCCTCTGGATTTCACATTTGTGTGCC
CAACAGAAATCATTGCTTTTAGTGACCGTGCTGCCGAATTCCGTGCAATC
AACTGTGAAGTCCTCGCATGCTCAGTCGACTCACACTTCTCACATCTTGC
ATGGTAATTGGCTGTTTCATTAAATTTCCAAACAGGGGGTGGATGAACCC
CAATTTGCAGAGTGTTTGGCATCTTGAGTGCACAACTTGAGAAAAGTCGA
GTGCAGGTGCAAATTTTGAGGCTGTCATACTCAGCGAACTGGGATGAACC
TTTTTAAGGCAGAAAAAGATTCTTAGACCTGCTTAGACACATGTGGATAC
CCTTTGGAAAATGGCAAAGTTTGCAAAAGAACCCTTGGGAAATTTTTTTT
CAAACCTTAAAAGTGAGGTTGGACAAATAAAAATCAATCTTTTAAACACC
TGGGAATTTAAAATAGTTTTTTATTCCCTGGAAAAATGAAAAAATACTCC
TTTATACGTCCTGGAAATTCTTCTCCCATTATCCCATGGAAAATATTCTT
CCAATAGTATGGCCTAATGTTATGTTATGGATCTTATTTTCTGTGCATTG
CTGCATGTTAAAGAATAACTTAGTGGCTAATTTTTTAAATTGATATTTCG
CTAATCAAAGGTCAAGATTTAAGTAGATAGCATTTCAGGAATTAGCCTCT
TTTTCACTTTAACAAAAATCCTGATCCTAAATCTTTGGCAAGGACTGAAT
TATGGAAAATGACCAAAAGTTACAAAACTTAATCCACTGAAGGTATTTAC
AATTACTATGAAATATATTTCCCATGGATTCCAAAATGTTTAGCTGAACT
TCTTATGAATAGCAAATAAAAACATGATTAAAATTTGGCTTCCATAGCAA
CCTTATGGTCTTGATAACACATGTATTTTTTATTAAACCATTAGTCTGCA
TTGATCAACCTTGAACAATATTTGATTTTATTTTCTTTTCTCCTGTCAGG
ACTGAGAGACCAAGAAACAAAGGAGGCCTAGGTAAAATGAATATCCCACT
TGTATCTGACTTAACAAAACAAATTTCCAAAGACTACGGAATCCTTCTTG
AAGATGCAGGCATCTCTCTCAGGTAAGATTGGTTTCGATACGTTTTTGGA
TTACTTAAAAGCTAAAAGTTGTAATTTTCAACTAATTTTCATCCATTTCA
AGATTCAAAAAGCATGCTTGCCATAAAAGTGCGATGTACTTTCTAACCCT
TATTTTGATGATTTCAGATCAAACCCATGTTTTAAGATTTTTAAGGCGTT
TCCTAGGAATCCATAAGTCTGGAAATGGTTTTTTAGCCCCAAATGGGCTA
GAGATTAATCTTTAATCTTTCTTAAGTAAGAAAAAGTGAAGTTNTTAGCC
CCAAATGGGCTAGAGATGAATCGTTAATCTTTCTTAAGTAAGAAAAAGTC
TTAAGATCTGCGCCGCATTAAGAATGACGGGTTCATGTAAAAACCAGGCG
AGTCATGCGTTTTTGGAGTTTGAAGTCTAGCCCCTTCATGGCTTTGAATA
AAATGATTTTAATTGAATTTTTTCAATTGGTTGGTAGTACGAAAATGAGA
TTTTTTTCATGGATGAACCTTCTCTAATCTATGTCTAAGGATTGATCAAT
CTTTCCTATATTTGGCGATTTAAACCATGTTTGTTTTCTTTAGAGGATTA
TTTATTATTGACGACAAAGGAACACTGCGACAAATCACCGTCAACGATTT
ACCGGTTGGACGATCTGTCGACGAAACTTTGCGATTAGTACAAGCTTTCA
AATTCACTGACGAACACGGAGAAGTTTGCCCTGCTGGATGGAAACCAGGA
TCTGACACCGTAAGTTCTTTTTTTGTTTTGCTGTCTAGCTCTTGAGTTTC
CAGGTCTCCAGTTCAGAAGATAGCATTTGCTGTTCATGTGCTGCAACTTA
ATTCATCAAAACTGCTTTAAAAATGTCAGCGAGGTTCTCAGGAGTGTAAA
CTGACCTTGACCTTGTCTAACCCATAAGCTGGAAAGCTGATAGGTTTTTT
GGTGTTCAGGGGCTTAAGTGTTTCTGCAAAGTGTTTTGCCATCCGATGAG
TTTAGATTTACAGGCTGCTACGCTGAGGCTTAATTAATCTCATCTCCCCG
TTGAAGGAATTAAATTATAAAGTTTAGAAAATTTTTGTGGTAATATTTAA
ACGTTTTTGATTAAAAACATTTAAGTTTTATCTTACTTTTTGAGTTGAGT
TGAGTTATATACATAACCTTACCCGTCTTAATCCCGATATGAAGAAGTGT
AGAGACTTTGTTTCACATGCATTATCAAGAAAAAATCTTTTATGTTTGAC
GTCATCATCTCAACAATATATATTGGTGAATCTTACTAGATTTTCCTGAA
CTTTTTGAATTACCGATTTCTTTTACTTTACACCTTGGAAACGAAAGATG
ATTTTTTTTCTCATATCTATATCTTTGTAAAATATTAAGTTTCCAATTTT
AAATGTTTTTCGAAAACGATATTTTGAAGTTTGTCACAAATCACGTCGCG
AATTCTCTTTTTCTCTCGCTTGTTTTATTGAACTGAAGATACTAGACAAA
ACACTTTCAAAAGATGAAAAGATAAAGAATTTTAGAGTCCACGTTTAATT
TTCTTTTTTCAGATCAAGCCATCAGTTGACGAGTCGAAAGAATATTTTGG
AAAACAATAGATTGTCTTCAATCGAAAAATGAGAAAGACCAATATCATTA
GGGACCGTTACCCCTTTGATCGAAGAACGACTTGATGGATTTTAAATATT
AGTACTAATATATTAGACATGTTGTTATTTTTAATTTTTCTTTCTACCCA
ACGTATTGTCGGGAAAGTTTAGGAGGCTGTAAGATCATGTCTTTTTTTAA
ACCATTAAAAGAACGTGGTAAGAGCATTTGCGGTTTGTTCGTGAACACAA
ACTTGATCCAAACTGCCTAAAGGGGGGACATAACCACTATTTTATGTTTT
GTTAATGTTTTTATACTTTTTGTTACATATTTTTTTTTTGCTCTGTACTT
ACTTAGGACAAATTCTATTTTCTTTAATATTATTATTGGTAGTAGAGTAA
AGAACTGTATTTCGAGGAAAACCGCTGTATTAAATTTTTACCCAAAATTG
TCCCACTAAAGTCTGCCTCAATAAAATTTGCAGCGGTAGACCAGCGGCCG
AGGTAATGAATTGTGTCACTTGGTAGGGCACCCCTTAGATCAGGGCAAAA
TTTTGATATTATGCAGCTAATAGGGTGTAGAATTGACAAAAAAATTGCCC
TTCAAATCTCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008514XLOC_008514Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015228-exon-sc0000205-1575043694:244347..244570TCONS_00015228-exon-sc0000205-1575043694:244347..244570Clytia hemisphaericaexon
TCONS_00015228-exon-sc0000205-1575043694:240371..240477TCONS_00015228-exon-sc0000205-1575043694:240371..240477Clytia hemisphaericaexon
TCONS_00015228-exon-sc0000205-1575043694:239918..240071TCONS_00015228-exon-sc0000205-1575043694:239918..240071Clytia hemisphaericaexon
TCONS_00015228-exon-sc0000205-1575043694:238949..239071TCONS_00015228-exon-sc0000205-1575043694:238949..239071Clytia hemisphaericaexon
TCONS_00015228-exon-sc0000205-1575043694:238212..238377TCONS_00015228-exon-sc0000205-1575043694:238212..238377Clytia hemisphaericaexon
TCONS_00015228-exon-sc0000205-1575043694:236759..237408TCONS_00015228-exon-sc0000205-1575043694:236759..237408Clytia hemisphaericaexon
TCONS_00015228-exon-sc0000205-1510915933:244347..244570TCONS_00015228-exon-sc0000205-1510915933:244347..244570Clytia hemisphaericaexon
TCONS_00015228-exon-sc0000205-1510915933:240371..240477TCONS_00015228-exon-sc0000205-1510915933:240371..240477Clytia hemisphaericaexon
TCONS_00015228-exon-sc0000205-1510915933:239918..240071TCONS_00015228-exon-sc0000205-1510915933:239918..240071Clytia hemisphaericaexon
TCONS_00015228-exon-sc0000205-1510915933:238949..239071TCONS_00015228-exon-sc0000205-1510915933:238949..239071Clytia hemisphaericaexon
TCONS_00015228-exon-sc0000205-1510915933:238212..238377TCONS_00015228-exon-sc0000205-1510915933:238212..238377Clytia hemisphaericaexon
TCONS_00015228-exon-sc0000205-1510915933:236759..237408TCONS_00015228-exon-sc0000205-1510915933:236759..237408Clytia hemisphaericaexon
TCONS_00015228-exon-sc0000205-1491911889:244347..244570TCONS_00015228-exon-sc0000205-1491911889:244347..244570Clytia hemisphaericaexon
TCONS_00015228-exon-sc0000205-1491911889:240371..240477TCONS_00015228-exon-sc0000205-1491911889:240371..240477Clytia hemisphaericaexon
TCONS_00015228-exon-sc0000205-1491911889:239918..240071TCONS_00015228-exon-sc0000205-1491911889:239918..240071Clytia hemisphaericaexon
TCONS_00015228-exon-sc0000205-1491911889:238949..239071TCONS_00015228-exon-sc0000205-1491911889:238949..239071Clytia hemisphaericaexon
TCONS_00015228-exon-sc0000205-1491911889:238212..238377TCONS_00015228-exon-sc0000205-1491911889:238212..238377Clytia hemisphaericaexon
TCONS_00015228-exon-sc0000205-1491911889:236759..237408TCONS_00015228-exon-sc0000205-1491911889:236759..237408Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000205supercontigsc0000205:236759..244570 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
699.776	710.895	825.987	840.936	173.252	140.89	276.618	284.24	468.33	356.57	515.604	436.796	174.371	185.304	125.476	115.477	270.138	257.634	153.799	213.527	272.642	256.622	421.083	392.806	320.916	353.903	336.539	329.866	327.486	303.49
Blast
[Close]
BLAST of TCONS_00015228 vs. Swiss-Prot (Human)
Match: PRDX1 (Peroxiredoxin-1 OS=Homo sapiens GN=PRDX1 PE=1 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 3.626e-101
Identity = 141/187 (75.40%), Postives = 159/187 (85.03%), Query Frame = 1 
Query:  259 APDFEAESVLADGSFGKVKLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSDRAAEFRAINCEVLACSVDSHFSHLAWTERPRNKGGLGKMNIPLVSDLTKQISKDYGILLEDAGISLRGLFIIDDKGTLRQITVNDLPVGRSVDETLRLVQAFKFTDEHGEVCPAGWKPGSDTIKPSVDESKEYFGKQ 819
            AP+F+A +V+ DG F  + LSDYKGKYVV FFYPLDFTFVCPTEIIAFSDRA EF+ +NC+V+  SVDSHF HLAW   P+ +GGLG MNIPLVSD  + I++DYG+L  D GIS RGLFIIDDKG LRQITVNDLPVGRSVDETLRLVQAF+FTD+HGEVCPAGWKPGSDTIKP V +SKEYF KQ
Sbjct:   12 APNFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLNCQVIGASVDSHFCHLAWVNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKADEGISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKHGEVCPAGWKPGSDTIKPDVQKSKEYFSKQ 198
The following BLAST results are available for this feature:
BLAST of TCONS_00015228 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PRDX13.626e-10175.40Peroxiredoxin-1 OS=Homo sapiens GN=PRDX1 PE=1 SV=1[more]
back to top