XLOC_030738 (gene) - C. hemisphaerica

Overview
NameXLOC_030738
Unique NameXLOC_030738
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_142:508308..515215+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030738 ID=XLOC_030738|Name=XLOC_030738|organism=Clytia hemisphaerica|type=gene|length=6908bp|location=Sequence derived from alignment at scaffold_142:508308..515215+ (Clytia hemisphaerica)
TTTTGCCTGTTTGACCATGGTGGTATTCATCCAACTTTCTTAGATAAAAA GGTCTGTAAAATAGGTAATTTACTGCTTTTATTTATAGCAAAGAAGCAAA ATAATTTGTTGGTAAAAATTATGGATGAAAACGATTCAATTGTATTTATA TCAATATAATCACAAACATAGTATATAGTGATGTGTTACCGAAGGGTGTT AAGGAAGCAAGCCTTTCTGTTCATATTCATATTGTTTGTTGCACTATGGT TTTTTATAAAATCGAGAAATTTTGTCACAGTTGACAACGAGTCAAATATG TATTCTAATAGTATAGACGATAGCAAAGAAACTGATTTGGAATTAGCAag actttcaaaaattgaagCTGAAAAAGAAGCAGTGAGAAACGAACAATTAG CTGAACTTGAGCATCAAGAAATGATGCGTAAACGTGAAGAGTCACTGAAG CAACAAACTATAGAAGACGACCCTTTCCATCCAAAACATAACATAGAAAG GGAATACACAGACTTTagtaattttaaaatcaatttcacACAAACTAACT ATAAGCCTGCGGATTTGAGAGAGGCTGTTAGGAAACTGAATGATGAACAG TTAATTTACAATAAAGAGATGTTAAAGAAACTACCAAAAGACTACATTGT TATGGTAGTGCAAGTTCATAAACGTGTAGAGTACTTTAAAGAACTTTTAG ACTCGATGCAGAGAGCCAAAGATATTGGATCGACATTACTGGTTGTTAGC CATGATTACTACACAGATGAAATGAACGCACTGATAAGGATGATCAAATT CTGTCCGGTTAGTAACTACTGTACTTTTTTTTGATCCTGTATTTTCATAA TcaagtattttttatttcatttggaTTTTTCAATGGTTTGAGTAAGAGTG GCCATATAACATTTTCACAGTACATCTTAATTGTAACATATCACCTAGAA AAAAAAGCACACCCTCTGACATGAGAATTATAATCTCCCAGTCAAAGGAT ATCAATCCTTCAGGTAACAAGTTTGCCCCTCCCCCTCTGAAAAATgggtt tttgttattttacccTTGGACATGACATTTTTTGCTACCCTAGTCAATAC AATCTTCCTCCCCATGTGTGAccattttctggaaaagcacAAATCAGGAG ACTTTCTAAagggttttttgttttgttttatttcacaGGTAGTTCAGatt ttctttccattttcaCTGCAATTATATCCAAATGAATTTCCTGGTCCAAG TCCAAATGATTGTCCAAGAGATATCAAAAAGCCAGAGTAAGTGTGTAATG TTTTTacttcaaaataagaacaaactatataccTTAAAGTGGAATAAGTT TCagtttgaaaaataataatagaaTGACTACACGGCTGCAAATATCCTTc ttactctcaggtgcctaataaactgcccccccccccccttgttaATTATT CGATTTTTATTCCAACCATTCCGTTTATTAGACACCTGAAAAGACATATA CTAAAAATATTAATTATTGTCAGATTATTTACCTACAGTTAGCTACTATA AGTTTTCCCTGAGAAAATGTGACCCAACCTCTAGACAAGTTTCCCATTAC TTATGCTCTTTCATAATAGATTTAAAAATCCTGTTTATTTTAAGTGCACG TGCGAAAGGTTGTATCAATGCAGAGACACCAGACATGTATGGTCATTATA GAGAAGCACCTATTGTTATGATTAAACATCATTGGTGGTGGAAGGTTTGT ATTATATtgtttagaaaatgaaaaagatgcCATGAGATGaattggtcaaa ttttcattaaaagtttaaaTTAGTGATTACAGTGGAATCTTTATAAATAA GGGTCATGGACTAAAATGGAATGAACTACGCATTTTTATGAccttaaaaa atggaaattttaNCGGACTAAAATAGAATGAACTGCGCATTTTTATGACC TTAAAAATGGAATTTTATTTGTCTTGAGTTATAAatcatttagaaaaaaa tgagaatgTTTTGACCTCTAATATCAACAGTTTTATAACCCCTTATGCAT TTTTGTATGTGTATAAATTATTACCTTATCTTGCTACTTTTCAGATTAAT CATGTAATGGACAATTTGGATCAAACAAAGAAGCACAATGGGCCTTTCCT TTTCATTGAAGAAGACCATTATTTAGCTCCAAGTTTCGTTCATGCTCTCA GGACgttgggaaatttcaaaaagaggtttgtttttgtggAACTATGAGCT TTCTCGTATATTGTGTTTTAATTTTGGTCAGGAATAATCTCGGAAATCTt ggcaaaattcaaaataatgctGTTTTGCCAAATAAGCAAAATAACAgttt tatcataatttttcaaaaatggccccaaattttttctaaaaggctcattc ttcagacaaaaaattaattaataacCTATCATTGGCTAAAATTAATgatt taattaaaatttaattaaGATGGAAGCCATTAGTAAAATGTATAAAAAGG ATCTTGATTAGAGTAGCATGGAAATTCTATCAACTTAATTGAATTCTcaa tattctttcttttttcagtgATGCGCGGTGTGCAGGTTCTTGTGAAATCA TGACCCTTGGAACGTATAACAATAAACAAAATTTCCAAACTGAAGGGAAA AGGGTAACAATATACTTATTCAAAATTACTCTCCCAAtccttattttttt cgaaatagtgGTTTTTCTTATAGTTTGATTTAAACCAGAACAAGGGATTT TTATTAATGGATAGATATTATGAAAAGAACTCGTGAACATATCCAAAATT GTGAATATTATATCTAACTTTTTCTAGTTGGAAACTTTCCAAAATCCGGA CTGCTTGTttctaaatttatcaaaacaggGATAGAATTCCGGCTTTTTCC GTTAGAAAAAATGACGCAATCTTAATTTATGCAAATCAAGAATCTTTTCA AATACAAGCAagatttaaattcatttttatctttcatttcAGGTGATGCG TGGTCAATGGATCTCATCACAGCACAATATGGGAATGGCCATGTATCGTA ACACTTGGAACGATCTGAAAAAATGCTCTGaggttttttatctttctttc aaCTAACCCTTTATTAGTTTTTTAGCTCTAGTGTAGTGAAAATATTTATC GAGAATCGTTTAATATTTAAACAGCATCTTTACTtaggaaaagaaaattt cgcAGGAAGGCAATTTTTTCATCAGGCTTCAATTTGCGGGAATCACAGTT TTGTAGGATCGGAGGtccaaaatcgcgaaattattCTTAATCCCAAATAA TTACAGTAgattctccataactcgaatctttattactcgaatgtctcctt aattcgaacagatTCGTTTGTTTTTGACTTTCACTCAGTACCCTCTATAA ACGAAACAGTGCattgaatttaatttttattcatcTTATCGgcaaaaaag agagaaatttcATCAACTTATAAACCTCTCCAtctgccccccccccttgg cgTTAAAATCATGGAGACTCTACCGTATAAGAAAAATTAACCCTCGAGGA GGCCTAAATTAAATTCTTAAACTTTAATATCTTTAGTTAGTCATGACTGG AACCCCCCCCTGGCCTgaggggggggctaaaaggtcgaACAGCGATTGGT ACCTAATTTTggcctgtggctaggggggactaaccatgttaggggtcacc taaattttttcagattgaTCTGCCTGGGGGCTAGATTAtatgtttggtga tttttttctgaacttgCTTTTCATCATAAGCAGCCTACCAGACCATAGGT TGGCACTTTCTCATCTTATATTTTATTGGGCTGTGGACGACAAggttttt gggatttttttttcacttcgaaatcctgagaaatttgaaaaaggtttcgg AAAATCCAGGATTTTTCCTCATTATTTAGTCATATGTAttggaaaatcca taaaatttgctctattttcttgccAANNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNagcaatgctcaaaaactgaaaatttggtatct aatatattatctgtaaaaattctttgaTTATGTTGCattacttagataaa aaatctgtctggcaAGGGATTTGCAGTGCAccctgacttacaaaaccttg ataatctgGCATGAACCTTCAATACTTAGCTTATTTCCTATTTCTTAGta gggcatttattctatttagcaataagctNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNGTTAGTAAATAATTCTTCCTTTAC ATAGTTTTCCTAaacttctttattttcaatatcttcATTCTTTCAGAAAT TCTGTGCTTATGACGATTACAACTGGGATTGGACGTTGATGCATTTGAGT AAACATTGTCTTCGTAAACAATTATTCGTCTTGTTGTATGAGGTGCCAAG GATCTTCCATGTCGGAGACTGGTAAGAATAGCTCCTCGTTCGTTTTTTCT CTTATTAATTCAATGAAGTATGAAAGCGTTCAAGTCTTTATTCTTCTTTA CTGTTCTCATCTCGTTCCtctattgggctcttccagaaagaaATCCGCTC ATTGGgtgtggaggatatattattttttcaatgaatttttCACTCCATAC CCATGGACAATCCTCAATTTAACCCCCTGAACACCAAAATTCCCCCCTGG ACATTTTTCAAACCTTAATTTAGTTTTATTTTCCTATTTAGTTTCAAAGT ACTCGCTCTTCAGCAACTTCTCTAAAGatagtacatgtttttttctatgA GCATAACGTTTACacgcatatgcaggctcaggtCTTGGTGcccaaaaaca ataaaatgctaagcataatgcgagcctgatataggacTAGACACTtgttt attaaaaaatgtatgTATGTCATCCATAGGagtaattttctcattttttt gaaGCGGACTGCATCACAAGAAAAAATGTTCCTCAACCAAAGACACTTTG AACAAAATCAAAGGAATCCTTGAACGGAATAAAGATTACTTGTATTCCGA TCGGATTGAACCGTATGACAAACATGCTACGCTAACGTTAAAACCTAACG GCGGTTGGGGAGATTCAAGAGATCACGAACTTTGTATGAGATACACTAAA GGGAATGAGCCTTTGAAATAacttattttagattttgttgatagtattat tttttgaattgaaaattaggCCGTGTGTGATCTCTAAGGTTCAgttttaa gttgtaattttaAACTCCCTATGaataccttttttcaaagattcccaAGT AAaactttgtgttttttttccaTAAAAAGTGACTAAAATCCCatgttttt gtgaaagttttctAATCACTCTATGAAGGCATTCTGCAATAGATGCAAAC ATTTTCAtacatttttgtttcttttttgtttctgttTAGCTATttattct aatattttttattctaaagTTATTCTGTAGTAaagtccagacggtgtcaa tcgaacgaattgaacgctgaatcaattgaacgcaattgaacacagtcgaa taattgcaattcgattgtcgaacgcaatcgaaTCGCAATCGAATATTACC CAGGATTTACCGATCGATTGCTTCAATTACGTTCGATTGTATTCGATTAT GTTTGATCACATTCGATTGATTCAATTGTATTAGATTTTATTCGCTTTCG TCCGGTACTTAAGCGCTCGGccgtccacgctaaaaagctctaacggagtg atccaatttagtttaatcgcaatcaaactcattgaacataatcgtaatcg aacgaaatcgaagattaatcgattgtaattgacaatcaatcgaaccagtc gaacatagtctactatcaatcgaaccaatcgaaccttactcgaacgcaat cgaatattacccaggaattggctgttcgattgagactcgattacgttcga cgatcgaatcgcaattattcgtttgcgttcgattaggttcgattgcgatt tttgttcgaagttgttcgattgacaccgtctggtaaaGTATTGacagttt ttcttttcataaagttaaagttattacaaaaaaaagagGTTGTATAaaat aatgtaattttttttcttcagaaaagCCTTTAAAGGTTGATGGCATGTTC ATAATTTGGCCAAAATAGATTGTAGAATTAAGGGAAATGCTATTTATTAT TCCTCTTGAATTCGAAGAATCGTGTTGAACTAGGTAAAACATTTGGTTCA GTTGCgctatatttgttttgttttgaagtttaTTAATTTATAAATGTTAT AAAAAACAAGTTGTGATAAAGTCTTATGGTTTTTTACTATTTCATAATAT TAATTATTTGATGGACATAATATTTTGTAATTGTAGCTGTTTTTTTAGAT AAATACAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048294TCONS_00048294Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048294-proteinTCONS_00048294-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_142supercontigscaffold_142:508308..515215 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
MGAT2alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
23.67 23.21 10.5 9.38 10.69 7.6 11.75 12.43 11.52 12.15 10.36 7.59 7.47 6.36 6.44 6.42 13.03 10.61 5.7 10.13 9.86 9.18 20.56 20.88 13.6 12.72 5.81 4.83 10.18 10.21