TCONS_00048294 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048294
Unique NameTCONS_00048294
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2890

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048294 ID=TCONS_00048294|Name=TCONS_00048294|organism=Clytia hemisphaerica|type=transcript|length=2890bp
TTTTGCCTGTTTGACCATGGTGGTATTCATCCAACTTTCTTAGATAAAAA
GGTCTGTAAAATAGGTAATTTACTGCTTTTATTTATAGCAAAGAAGCAAA
ATAATTTGTTGGTAAAAATTATGGATGAAAACGATTCAATTGTATTTATA
TCAATATAATCACAAACATAGTATATAGTGATGTGTTACCGAAGGGTGTT
AAGGAAGCAAGCCTTTCTGTTCATATTCATATTGTTTGTTGCACTATGGT
TTTTTATAAAATCGAGAAATTTTGTCACAGTTGACAACGAGTCAAATATG
TATTCTAATAGTATAGACGATAGCAAAGAAACTGATTTGGAATTAGCAag
actttcaaaaattgaagCTGAAAAAGAAGCAGTGAGAAACGAACAATTAG
CTGAACTTGAGCATCAAGAAATGATGCGTAAACGTGAAGAGTCACTGAAG
CAACAAACTATAGAAGACGACCCTTTCCATCCAAAACATAACATAGAAAG
GGAATACACAGACTTTagtaattttaaaatcaatttcacACAAACTAACT
ATAAGCCTGCGGATTTGAGAGAGGCTGTTAGGAAACTGAATGATGAACAG
TTAATTTACAATAAAGAGATGTTAAAGAAACTACCAAAAGACTACATTGT
TATGGTAGTGCAAGTTCATAAACGTGTAGAGTACTTTAAAGAACTTTTAG
ACTCGATGCAGAGAGCCAAAGATATTGGATCGACATTACTGGTTGTTAGC
CATGATTACTACACAGATGAAATGAACGCACTGATAAGGATGATCAAATT
CTGTCCGGTAGTTCAGattttctttccattttcaCTGCAATTATATCCAA
ATGAATTTCCTGGTCCAAGTCCAAATGATTGTCCAAGAGATATCAAAAAG
CCAGATGCACGTGCGAAAGGTTGTATCAATGCAGAGACACCAGACATGTA
TGGTCATTATAGAGAAGCACCTATTGTTATGATTAAACATCATTGGTGGT
GGAAGATTAATCATGTAATGGACAATTTGGATCAAACAAAGAAGCACAAT
GGGCCTTTCCTTTTCATTGAAGAAGACCATTATTTAGCTCCAAGTTTCGT
TCATGCTCTCAGGACgttgggaaatttcaaaaagagtgATGCGCGGTGTG
CAGGTTCTTGTGAAATCATGACCCTTGGAACGTATAACAATAAACAAAAT
TTCCAAACTGAAGGGAAAAGGGTGATGCGTGGTCAATGGATCTCATCACA
GCACAATATGGGAATGGCCATGTATCGTAACACTTGGAACGATCTGAAAA
AATGCTCTGagAAATTCTGTGCTTATGACGATTACAACTGGGATTGGACG
TTGATGCATTTGAGTAAACATTGTCTTCGTAAACAATTATTCGTCTTGTT
GTATGAGGTGCCAAGGATCTTCCATGTCGGAGACTGCGGACTGCATCACA
AGAAAAAATGTTCCTCAACCAAAGACACTTTGAACAAAATCAAAGGAATC
CTTGAACGGAATAAAGATTACTTGTATTCCGATCGGATTGAACCGTATGA
CAAACATGCTACGCTAACGTTAAAACCTAACGGCGGTTGGGGAGATTCAA
GAGATCACGAACTTTGTATGAGATACACTAAAGGGAATGAGCCTTTGAAA
TAacttattttagattttgttgatagtattattttttgaattgaaaatta
ggCCGTGTGTGATCTCTAAGGTTCAgttttaagttgtaattttaAACTCC
CTATGaataccttttttcaaagattcccaAGTAAaactttgtgttttttt
tccaTAAAAAGTGACTAAAATCCCatgtttttgtgaaagttttctAATCA
CTCTATGAAGGCATTCTGCAATAGATGCAAACATTTTCAtacatttttgt
ttcttttttgtttctgttTAGCTATttattctaatattttttattctaaa
gTTATTCTGTAGTAaagtccagacggtgtcaatcgaacgaattgaacgct
gaatcaattgaacgcaattgaacacagtcgaataattgcaattcgattgt
cgaacgcaatcgaaTCGCAATCGAATATTACCCAGGATTTACCGATCGAT
TGCTTCAATTACGTTCGATTGTATTCGATTATGTTTGATCACATTCGATT
GATTCAATTGTATTAGATTTTATTCGCTTTCGTCCGGTACTTAAGCGCTC
GGccgtccacgctaaaaagctctaacggagtgatccaatttagtttaatc
gcaatcaaactcattgaacataatcgtaatcgaacgaaatcgaagattaa
tcgattgtaattgacaatcaatcgaaccagtcgaacatagtctactatca
atcgaaccaatcgaaccttactcgaacgcaatcgaatattacccaggaat
tggctgttcgattgagactcgattacgttcgacgatcgaatcgcaattat
tcgtttgcgttcgattaggttcgattgcgatttttgttcgaagttgttcg
attgacaccgtctggtaaaGTATTGacagtttttcttttcataaagttaa
agttattacaaaaaaaagagGTTGTATAaaataatgtaattttttttctt
cagaaaagCCTTTAAAGGTTGATGGCATGTTCATAATTTGGCCAAAATAG
ATTGTAGAATTAAGGGAAATGCTATTTATTATTCCTCTTGAATTCGAAGA
ATCGTGTTGAACTAGGTAAAACATTTGGTTCAGTTGCgctatatttgttt
tgttttgaagtttaTTAATTTATAAATGTTATAAAAAACAAGTTGTGATA
AAGTCTTATGGTTTTTTACTATTTCATAATATTAATTATTTGATGGACAT
AATATTTTGTAATTGTAGCTGTTTTTTTAGATAAATACAG
Run BLAST on NCBI

protein sequence of TCONS_00048294-protein

>TCONS_00048294-protein ID=TCONS_00048294-protein|Name=TCONS_00048294-protein|organism=Clytia hemisphaerica|type=polypeptide|length=490bp
MCYRRVLRKQAFLFIFILFVALWFFIKSRNFVTVDNESNMYSNSIDDSKE
TDLELARLSKIEAEKEAVRNEQLAELEHQEMMRKREESLKQQTIEDDPFH
PKHNIEREYTDFSNFKINFTQTNYKPADLREAVRKLNDEQLIYNKEMLKK
LPKDYIVMVVQVHKRVEYFKELLDSMQRAKDIGSTLLVVSHDYYTDEMNA
LIRMIKFCPVVQIFFPFSLQLYPNEFPGPSPNDCPRDIKKPDARAKGCIN
AETPDMYGHYREAPIVMIKHHWWWKINHVMDNLDQTKKHNGPFLFIEEDH
YLAPSFVHALRTLGNFKKSDARCAGSCEIMTLGTYNNKQNFQTEGKRVMR
GQWISSQHNMGMAMYRNTWNDLKKCSEKFCAYDDYNWDWTLMHLSKHCLR
KQLFVLLYEVPRIFHVGDCGLHHKKKCSSTKDTLNKIKGILERNKDYLYS
DRIEPYDKHATLTLKPNGGWGDSRDHELCMRYTKGNEPLK
Run BLAST on NCBI

transcript from alignment at scaffold_142:508308..515215+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048294 ID=TCONS_00048294|Name=TCONS_00048294|organism=Clytia hemisphaerica|type=transcript|length=6908bp|location=Sequence derived from alignment at scaffold_142:508308..515215+ (Clytia hemisphaerica)
TTTTGCCTGTTTGACCATGGTGGTATTCATCCAACTTTCTTAGATAAAAA
GGTCTGTAAAATAGGTAATTTACTGCTTTTATTTATAGCAAAGAAGCAAA
ATAATTTGTTGGTAAAAATTATGGATGAAAACGATTCAATTGTATTTATA
TCAATATAATCACAAACATAGTATATAGTGATGTGTTACCGAAGGGTGTT
AAGGAAGCAAGCCTTTCTGTTCATATTCATATTGTTTGTTGCACTATGGT
TTTTTATAAAATCGAGAAATTTTGTCACAGTTGACAACGAGTCAAATATG
TATTCTAATAGTATAGACGATAGCAAAGAAACTGATTTGGAATTAGCAag
actttcaaaaattgaagCTGAAAAAGAAGCAGTGAGAAACGAACAATTAG
CTGAACTTGAGCATCAAGAAATGATGCGTAAACGTGAAGAGTCACTGAAG
CAACAAACTATAGAAGACGACCCTTTCCATCCAAAACATAACATAGAAAG
GGAATACACAGACTTTagtaattttaaaatcaatttcacACAAACTAACT
ATAAGCCTGCGGATTTGAGAGAGGCTGTTAGGAAACTGAATGATGAACAG
TTAATTTACAATAAAGAGATGTTAAAGAAACTACCAAAAGACTACATTGT
TATGGTAGTGCAAGTTCATAAACGTGTAGAGTACTTTAAAGAACTTTTAG
ACTCGATGCAGAGAGCCAAAGATATTGGATCGACATTACTGGTTGTTAGC
CATGATTACTACACAGATGAAATGAACGCACTGATAAGGATGATCAAATT
CTGTCCGGTTAGTAACTACTGTACTTTTTTTTGATCCTGTATTTTCATAA
TcaagtattttttatttcatttggaTTTTTCAATGGTTTGAGTAAGAGTG
GCCATATAACATTTTCACAGTACATCTTAATTGTAACATATCACCTAGAA
AAAAAAGCACACCCTCTGACATGAGAATTATAATCTCCCAGTCAAAGGAT
ATCAATCCTTCAGGTAACAAGTTTGCCCCTCCCCCTCTGAAAAATgggtt
tttgttattttacccTTGGACATGACATTTTTTGCTACCCTAGTCAATAC
AATCTTCCTCCCCATGTGTGAccattttctggaaaagcacAAATCAGGAG
ACTTTCTAAagggttttttgttttgttttatttcacaGGTAGTTCAGatt
ttctttccattttcaCTGCAATTATATCCAAATGAATTTCCTGGTCCAAG
TCCAAATGATTGTCCAAGAGATATCAAAAAGCCAGAGTAAGTGTGTAATG
TTTTTacttcaaaataagaacaaactatataccTTAAAGTGGAATAAGTT
TCagtttgaaaaataataatagaaTGACTACACGGCTGCAAATATCCTTc
ttactctcaggtgcctaataaactgcccccccccccccttgttaATTATT
CGATTTTTATTCCAACCATTCCGTTTATTAGACACCTGAAAAGACATATA
CTAAAAATATTAATTATTGTCAGATTATTTACCTACAGTTAGCTACTATA
AGTTTTCCCTGAGAAAATGTGACCCAACCTCTAGACAAGTTTCCCATTAC
TTATGCTCTTTCATAATAGATTTAAAAATCCTGTTTATTTTAAGTGCACG
TGCGAAAGGTTGTATCAATGCAGAGACACCAGACATGTATGGTCATTATA
GAGAAGCACCTATTGTTATGATTAAACATCATTGGTGGTGGAAGGTTTGT
ATTATATtgtttagaaaatgaaaaagatgcCATGAGATGaattggtcaaa
ttttcattaaaagtttaaaTTAGTGATTACAGTGGAATCTTTATAAATAA
GGGTCATGGACTAAAATGGAATGAACTACGCATTTTTATGAccttaaaaa
atggaaattttaNCGGACTAAAATAGAATGAACTGCGCATTTTTATGACC
TTAAAAATGGAATTTTATTTGTCTTGAGTTATAAatcatttagaaaaaaa
tgagaatgTTTTGACCTCTAATATCAACAGTTTTATAACCCCTTATGCAT
TTTTGTATGTGTATAAATTATTACCTTATCTTGCTACTTTTCAGATTAAT
CATGTAATGGACAATTTGGATCAAACAAAGAAGCACAATGGGCCTTTCCT
TTTCATTGAAGAAGACCATTATTTAGCTCCAAGTTTCGTTCATGCTCTCA
GGACgttgggaaatttcaaaaagaggtttgtttttgtggAACTATGAGCT
TTCTCGTATATTGTGTTTTAATTTTGGTCAGGAATAATCTCGGAAATCTt
ggcaaaattcaaaataatgctGTTTTGCCAAATAAGCAAAATAACAgttt
tatcataatttttcaaaaatggccccaaattttttctaaaaggctcattc
ttcagacaaaaaattaattaataacCTATCATTGGCTAAAATTAATgatt
taattaaaatttaattaaGATGGAAGCCATTAGTAAAATGTATAAAAAGG
ATCTTGATTAGAGTAGCATGGAAATTCTATCAACTTAATTGAATTCTcaa
tattctttcttttttcagtgATGCGCGGTGTGCAGGTTCTTGTGAAATCA
TGACCCTTGGAACGTATAACAATAAACAAAATTTCCAAACTGAAGGGAAA
AGGGTAACAATATACTTATTCAAAATTACTCTCCCAAtccttattttttt
cgaaatagtgGTTTTTCTTATAGTTTGATTTAAACCAGAACAAGGGATTT
TTATTAATGGATAGATATTATGAAAAGAACTCGTGAACATATCCAAAATT
GTGAATATTATATCTAACTTTTTCTAGTTGGAAACTTTCCAAAATCCGGA
CTGCTTGTttctaaatttatcaaaacaggGATAGAATTCCGGCTTTTTCC
GTTAGAAAAAATGACGCAATCTTAATTTATGCAAATCAAGAATCTTTTCA
AATACAAGCAagatttaaattcatttttatctttcatttcAGGTGATGCG
TGGTCAATGGATCTCATCACAGCACAATATGGGAATGGCCATGTATCGTA
ACACTTGGAACGATCTGAAAAAATGCTCTGaggttttttatctttctttc
aaCTAACCCTTTATTAGTTTTTTAGCTCTAGTGTAGTGAAAATATTTATC
GAGAATCGTTTAATATTTAAACAGCATCTTTACTtaggaaaagaaaattt
cgcAGGAAGGCAATTTTTTCATCAGGCTTCAATTTGCGGGAATCACAGTT
TTGTAGGATCGGAGGtccaaaatcgcgaaattattCTTAATCCCAAATAA
TTACAGTAgattctccataactcgaatctttattactcgaatgtctcctt
aattcgaacagatTCGTTTGTTTTTGACTTTCACTCAGTACCCTCTATAA
ACGAAACAGTGCattgaatttaatttttattcatcTTATCGgcaaaaaag
agagaaatttcATCAACTTATAAACCTCTCCAtctgccccccccccttgg
cgTTAAAATCATGGAGACTCTACCGTATAAGAAAAATTAACCCTCGAGGA
GGCCTAAATTAAATTCTTAAACTTTAATATCTTTAGTTAGTCATGACTGG
AACCCCCCCCTGGCCTgaggggggggctaaaaggtcgaACAGCGATTGGT
ACCTAATTTTggcctgtggctaggggggactaaccatgttaggggtcacc
taaattttttcagattgaTCTGCCTGGGGGCTAGATTAtatgtttggtga
tttttttctgaacttgCTTTTCATCATAAGCAGCCTACCAGACCATAGGT
TGGCACTTTCTCATCTTATATTTTATTGGGCTGTGGACGACAAggttttt
gggatttttttttcacttcgaaatcctgagaaatttgaaaaaggtttcgg
AAAATCCAGGATTTTTCCTCATTATTTAGTCATATGTAttggaaaatcca
taaaatttgctctattttcttgccAANNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNagcaatgctcaaaaactgaaaatttggtatct
aatatattatctgtaaaaattctttgaTTATGTTGCattacttagataaa
aaatctgtctggcaAGGGATTTGCAGTGCAccctgacttacaaaaccttg
ataatctgGCATGAACCTTCAATACTTAGCTTATTTCCTATTTCTTAGta
gggcatttattctatttagcaataagctNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNGTTAGTAAATAATTCTTCCTTTAC
ATAGTTTTCCTAaacttctttattttcaatatcttcATTCTTTCAGAAAT
TCTGTGCTTATGACGATTACAACTGGGATTGGACGTTGATGCATTTGAGT
AAACATTGTCTTCGTAAACAATTATTCGTCTTGTTGTATGAGGTGCCAAG
GATCTTCCATGTCGGAGACTGGTAAGAATAGCTCCTCGTTCGTTTTTTCT
CTTATTAATTCAATGAAGTATGAAAGCGTTCAAGTCTTTATTCTTCTTTA
CTGTTCTCATCTCGTTCCtctattgggctcttccagaaagaaATCCGCTC
ATTGGgtgtggaggatatattattttttcaatgaatttttCACTCCATAC
CCATGGACAATCCTCAATTTAACCCCCTGAACACCAAAATTCCCCCCTGG
ACATTTTTCAAACCTTAATTTAGTTTTATTTTCCTATTTAGTTTCAAAGT
ACTCGCTCTTCAGCAACTTCTCTAAAGatagtacatgtttttttctatgA
GCATAACGTTTACacgcatatgcaggctcaggtCTTGGTGcccaaaaaca
ataaaatgctaagcataatgcgagcctgatataggacTAGACACTtgttt
attaaaaaatgtatgTATGTCATCCATAGGagtaattttctcattttttt
gaaGCGGACTGCATCACAAGAAAAAATGTTCCTCAACCAAAGACACTTTG
AACAAAATCAAAGGAATCCTTGAACGGAATAAAGATTACTTGTATTCCGA
TCGGATTGAACCGTATGACAAACATGCTACGCTAACGTTAAAACCTAACG
GCGGTTGGGGAGATTCAAGAGATCACGAACTTTGTATGAGATACACTAAA
GGGAATGAGCCTTTGAAATAacttattttagattttgttgatagtattat
tttttgaattgaaaattaggCCGTGTGTGATCTCTAAGGTTCAgttttaa
gttgtaattttaAACTCCCTATGaataccttttttcaaagattcccaAGT
AAaactttgtgttttttttccaTAAAAAGTGACTAAAATCCCatgttttt
gtgaaagttttctAATCACTCTATGAAGGCATTCTGCAATAGATGCAAAC
ATTTTCAtacatttttgtttcttttttgtttctgttTAGCTATttattct
aatattttttattctaaagTTATTCTGTAGTAaagtccagacggtgtcaa
tcgaacgaattgaacgctgaatcaattgaacgcaattgaacacagtcgaa
taattgcaattcgattgtcgaacgcaatcgaaTCGCAATCGAATATTACC
CAGGATTTACCGATCGATTGCTTCAATTACGTTCGATTGTATTCGATTAT
GTTTGATCACATTCGATTGATTCAATTGTATTAGATTTTATTCGCTTTCG
TCCGGTACTTAAGCGCTCGGccgtccacgctaaaaagctctaacggagtg
atccaatttagtttaatcgcaatcaaactcattgaacataatcgtaatcg
aacgaaatcgaagattaatcgattgtaattgacaatcaatcgaaccagtc
gaacatagtctactatcaatcgaaccaatcgaaccttactcgaacgcaat
cgaatattacccaggaattggctgttcgattgagactcgattacgttcga
cgatcgaatcgcaattattcgtttgcgttcgattaggttcgattgcgatt
tttgttcgaagttgttcgattgacaccgtctggtaaaGTATTGacagttt
ttcttttcataaagttaaagttattacaaaaaaaagagGTTGTATAaaat
aatgtaattttttttcttcagaaaagCCTTTAAAGGTTGATGGCATGTTC
ATAATTTGGCCAAAATAGATTGTAGAATTAAGGGAAATGCTATTTATTAT
TCCTCTTGAATTCGAAGAATCGTGTTGAACTAGGTAAAACATTTGGTTCA
GTTGCgctatatttgttttgttttgaagtttaTTAATTTATAAATGTTAT
AAAAAACAAGTTGTGATAAAGTCTTATGGTTTTTTACTATTTCATAATAT
TAATTATTTGATGGACATAATATTTTGTAATTGTAGCTGTTTTTTTAGAT
AAATACAG

Coding sequence (CDS) from alignment at scaffold_142:508308..515215+

>TCONS_00048294 ID=TCONS_00048294|Name=TCONS_00048294|organism=Clytia hemisphaerica|type=CDS|length=11784bp|location=Sequence derived from alignment at scaffold_142:508308..515215+ (Clytia hemisphaerica)
ATGTGTTACCGAAGGGTGTTAAGGAAGCAAGCCTTTCTGTTCATATTCAT
ATTGTTTGTTGCACTATGGTTTTTTATAAAATCGAGAAATTTTGTCACAG
TTGACAACGAGTCAAATATGTATTCTAATAGTATAGACGATAGCAAAGAA
ACTGATTTGGAATTAGCAagactttcaaaaattgaagCTGAAAAAGAAGC
AGTGAGAAACGAACAATTAGCTGAACTTGAGCATCAAGAAATGATGCGTA
AACGTGAAGAGTCACTGAAGCAACAAACTATAGAAGACGACCCTTTCCAT
CCAAAACATAACATAGAAAGGGAATACACAGACTTTagtaattttaaaat
caatttcacACAAACTAACTATAAGCCTGCGGATTTGAGAGAGGCTGTTA
GGAAACTGAATGATGAACAGTTAATTTACAATAAAGAGATGTTAAAGAAA
CTACCAAAAGACTACATTGTTATGGTAGTGCAAGTTCATAAACGTGTAGA
GTACTTTAAAGAACTTTTAGACTCGATGCAGAGAGCCAAAGATATTGGAT
CGACATTACTGGTTGTTAGCCATGATTACTACACAGATGAAATGAACGCA
CTGATAAGGATGATCAAATTCTGTCCGGTAGTTCAGattttctttccatt
ttcaCTGCAATTATATCCAAATGAATTTCCTGGTCCAAGTCCAAATGATT
GTCCAAGAGATATCAAAAAGCCAGATGCACGTGCGAAAGGTTGTATCAAT
GCAGAGACACCAGACATGTATGGTCATTATAGAGAAGCACCTATTGTTAT
GATTAAACATCATTGGTGGTGGAAGATTAATCATGTAATGGACAATTTGG
ATCAAACAAAGAAGCACAATGGGCCTTTCCTTTTCATTGAAGAAGACCAT
TATTTAGCTCCAAGTTTCGTTCATGCTCTCAGGACgttgggaaatttcaa
aaagagtgATGCGCGGTGTGCAGGTTCTTGTGAAATCATGACCCTTGGAA
CGTATAACAATAAACAAAATTTCCAAACTGAAGGGAAAAGGGTGATGCGT
GGTCAATGGATCTCATCACAGCACAATATGGGAATGGCCATGTATCGTAA
CACTTGGAACGATCTGAAAAAATGCTCTGagAAATTCTGTGCTTATGACG
ATTACAACTGGGATTGGACGTTGATGCATTTGAGTAAACATTGTCTTCGT
AAACAATTATTCGTCTTGTTGTATGAGGTGCCAAGGATCTTCCATGTCGG
AGACTGCGGACTGCATCACAAGAAAAAATGTTCCTCAACCAAAGACACTT
TGAACAAAATCAAAGGAATCCTTGAACGGAATAAAGATTACTTGTATTCC
GATCGGATTGAACCGTATGACAAACATGCTACGCTAACGTTAAAACCTAA
CGGCGGTTGGGGAGATTCAAGAGATCACGAACTTTGTATGAGATACACTA
AAGGGAATGAGCCTTTGAAATAaATGTGTTACCGAAGGGTGTTAAGGAAG
CAAGCCTTTCTGTTCATATTCATATTGTTTGTTGCACTATGGTTTTTTAT
AAAATCGAGAAATTTTGTCACAGTTGACAACGAGTCAAATATGTATTCTA
ATAGTATAGACGATAGCAAAGAAACTGATTTGGAATTAGCAagactttca
aaaattgaagCTGAAAAAGAAGCAGTGAGAAACGAACAATTAGCTGAACT
TGAGCATCAAGAAATGATGCGTAAACGTGAAGAGTCACTGAAGCAACAAA
CTATAGAAGACGACCCTTTCCATCCAAAACATAACATAGAAAGGGAATAC
ACAGACTTTagtaattttaaaatcaatttcacACAAACTAACTATAAGCC
TGCGGATTTGAGAGAGGCTGTTAGGAAACTGAATGATGAACAGTTAATTT
ACAATAAAGAGATGTTAAAGAAACTACCAAAAGACTACATTGTTATGGTA
GTGCAAGTTCATAAACGTGTAGAGTACTTTAAAGAACTTTTAGACTCGAT
GCAGAGAGCCAAAGATATTGGATCGACATTACTGGTTGTTAGCCATGATT
ACTACACAGATGAAATGAACGCACTGATAAGGATGATCAAATTCTGTCCG
GTAGTTCAGattttctttccattttcaCTGCAATTATATCCAAATGAATT
TCCTGGTCCAAGTCCAAATGATTGTCCAAGAGATATCAAAAAGCCAGATG
CACGTGCGAAAGGTTGTATCAATGCAGAGACACCAGACATGTATGGTCAT
TATAGAGAAGCACCTATTGTTATGATTAAACATCATTGGTGGTGGAAGAT
TAATCATGTAATGGACAATTTGGATCAAACAAAGAAGCACAATGGGCCTT
TCCTTTTCATTGAAGAAGACCATTATTTAGCTCCAAGTTTCGTTCATGCT
CTCAGGACgttgggaaatttcaaaaagagtgATGCGCGGTGTGCAGGTTC
TTGTGAAATCATGACCCTTGGAACGTATAACAATAAACAAAATTTCCAAA
CTGAAGGGAAAAGGGTGATGCGTGGTCAATGGATCTCATCACAGCACAAT
ATGGGAATGGCCATGTATCGTAACACTTGGAACGATCTGAAAAAATGCTC
TGagAAATTCTGTGCTTATGACGATTACAACTGGGATTGGACGTTGATGC
ATTTGAGTAAACATTGTCTTCGTAAACAATTATTCGTCTTGTTGTATGAG
GTGCCAAGGATCTTCCATGTCGGAGACTGCGGACTGCATCACAAGAAAAA
ATGTTCCTCAACCAAAGACACTTTGAACAAAATCAAAGGAATCCTTGAAC
GGAATAAAGATTACTTGTATTCCGATCGGATTGAACCGTATGACAAACAT
GCTACGCTAACGTTAAAACCTAACGGCGGTTGGGGAGATTCAAGAGATCA
CGAACTTTGTATGAGATACACTAAAGGGAATGAGCCTTTGAAATAaATGT
GTTACCGAAGGGTGTTAAGGAAGCAAGCCTTTCTGTTCATATTCATATTG
TTTGTTGCACTATGGTTTTTTATAAAATCGAGAAATTTTGTCACAGTTGA
CAACGAGTCAAATATGTATTCTAATAGTATAGACGATAGCAAAGAAACTG
ATTTGGAATTAGCAagactttcaaaaattgaagCTGAAAAAGAAGCAGTG
AGAAACGAACAATTAGCTGAACTTGAGCATCAAGAAATGATGCGTAAACG
TGAAGAGTCACTGAAGCAACAAACTATAGAAGACGACCCTTTCCATCCAA
AACATAACATAGAAAGGGAATACACAGACTTTagtaattttaaaatcaat
ttcacACAAACTAACTATAAGCCTGCGGATTTGAGAGAGGCTGTTAGGAA
ACTGAATGATGAACAGTTAATTTACAATAAAGAGATGTTAAAGAAACTAC
CAAAAGACTACATTGTTATGGTAGTGCAAGTTCATAAACGTGTAGAGTAC
TTTAAAGAACTTTTAGACTCGATGCAGAGAGCCAAAGATATTGGATCGAC
ATTACTGGTTGTTAGCCATGATTACTACACAGATGAAATGAACGCACTGA
TAAGGATGATCAAATTCTGTCCGGTAGTTCAGattttctttccattttca
CTGCAATTATATCCAAATGAATTTCCTGGTCCAAGTCCAAATGATTGTCC
AAGAGATATCAAAAAGCCAGATGCACGTGCGAAAGGTTGTATCAATGCAG
AGACACCAGACATGTATGGTCATTATAGAGAAGCACCTATTGTTATGATT
AAACATCATTGGTGGTGGAAGATTAATCATGTAATGGACAATTTGGATCA
AACAAAGAAGCACAATGGGCCTTTCCTTTTCATTGAAGAAGACCATTATT
TAGCTCCAAGTTTCGTTCATGCTCTCAGGACgttgggaaatttcaaaaag
agtgATGCGCGGTGTGCAGGTTCTTGTGAAATCATGACCCTTGGAACGTA
TAACAATAAACAAAATTTCCAAACTGAAGGGAAAAGGGTGATGCGTGGTC
AATGGATCTCATCACAGCACAATATGGGAATGGCCATGTATCGTAACACT
TGGAACGATCTGAAAAAATGCTCTGagAAATTCTGTGCTTATGACGATTA
CAACTGGGATTGGACGTTGATGCATTTGAGTAAACATTGTCTTCGTAAAC
AATTATTCGTCTTGTTGTATGAGGTGCCAAGGATCTTCCATGTCGGAGAC
TGCGGACTGCATCACAAGAAAAAATGTTCCTCAACCAAAGACACTTTGAA
CAAAATCAAAGGAATCCTTGAACGGAATAAAGATTACTTGTATTCCGATC
GGATTGAACCGTATGACAAACATGCTACGCTAACGTTAAAACCTAACGGC
GGTTGGGGAGATTCAAGAGATCACGAACTTTGTATGAGATACACTAAAGG
GAATGAGCCTTTGAAATAaATGTGTTACCGAAGGGTGTTAAGGAAGCAAG
CCTTTCTGTTCATATTCATATTGTTTGTTGCACTATGGTTTTTTATAAAA
TCGAGAAATTTTGTCACAGTTGACAACGAGTCAAATATGTATTCTAATAG
TATAGACGATAGCAAAGAAACTGATTTGGAATTAGCAagactttcaaaaa
ttgaagCTGAAAAAGAAGCAGTGAGAAACGAACAATTAGCTGAACTTGAG
CATCAAGAAATGATGCGTAAACGTGAAGAGTCACTGAAGCAACAAACTAT
AGAAGACGACCCTTTCCATCCAAAACATAACATAGAAAGGGAATACACAG
ACTTTagtaattttaaaatcaatttcacACAAACTAACTATAAGCCTGCG
GATTTGAGAGAGGCTGTTAGGAAACTGAATGATGAACAGTTAATTTACAA
TAAAGAGATGTTAAAGAAACTACCAAAAGACTACATTGTTATGGTAGTGC
AAGTTCATAAACGTGTAGAGTACTTTAAAGAACTTTTAGACTCGATGCAG
AGAGCCAAAGATATTGGATCGACATTACTGGTTGTTAGCCATGATTACTA
CACAGATGAAATGAACGCACTGATAAGGATGATCAAATTCTGTCCGGTAG
TTCAGattttctttccattttcaCTGCAATTATATCCAAATGAATTTCCT
GGTCCAAGTCCAAATGATTGTCCAAGAGATATCAAAAAGCCAGATGCACG
TGCGAAAGGTTGTATCAATGCAGAGACACCAGACATGTATGGTCATTATA
GAGAAGCACCTATTGTTATGATTAAACATCATTGGTGGTGGAAGATTAAT
CATGTAATGGACAATTTGGATCAAACAAAGAAGCACAATGGGCCTTTCCT
TTTCATTGAAGAAGACCATTATTTAGCTCCAAGTTTCGTTCATGCTCTCA
GGACgttgggaaatttcaaaaagagtgATGCGCGGTGTGCAGGTTCTTGT
GAAATCATGACCCTTGGAACGTATAACAATAAACAAAATTTCCAAACTGA
AGGGAAAAGGGTGATGCGTGGTCAATGGATCTCATCACAGCACAATATGG
GAATGGCCATGTATCGTAACACTTGGAACGATCTGAAAAAATGCTCTGag
AAATTCTGTGCTTATGACGATTACAACTGGGATTGGACGTTGATGCATTT
GAGTAAACATTGTCTTCGTAAACAATTATTCGTCTTGTTGTATGAGGTGC
CAAGGATCTTCCATGTCGGAGACTGCGGACTGCATCACAAGAAAAAATGT
TCCTCAACCAAAGACACTTTGAACAAAATCAAAGGAATCCTTGAACGGAA
TAAAGATTACTTGTATTCCGATCGGATTGAACCGTATGACAAACATGCTA
CGCTAACGTTAAAACCTAACGGCGGTTGGGGAGATTCAAGAGATCACGAA
CTTTGTATGAGATACACTAAAGGGAATGAGCCTTTGAAATAaATGTGTTA
CCGAAGGGTGTTAAGGAAGCAAGCCTTTCTGTTCATATTCATATTGTTTG
TTGCACTATGGTTTTTTATAAAATCGAGAAATTTTGTCACAGTTGACAAC
GAGTCAAATATGTATTCTAATAGTATAGACGATAGCAAAGAAACTGATTT
GGAATTAGCAagactttcaaaaattgaagCTGAAAAAGAAGCAGTGAGAA
ACGAACAATTAGCTGAACTTGAGCATCAAGAAATGATGCGTAAACGTGAA
GAGTCACTGAAGCAACAAACTATAGAAGACGACCCTTTCCATCCAAAACA
TAACATAGAAAGGGAATACACAGACTTTagtaattttaaaatcaatttca
cACAAACTAACTATAAGCCTGCGGATTTGAGAGAGGCTGTTAGGAAACTG
AATGATGAACAGTTAATTTACAATAAAGAGATGTTAAAGAAACTACCAAA
AGACTACATTGTTATGGTAGTGCAAGTTCATAAACGTGTAGAGTACTTTA
AAGAACTTTTAGACTCGATGCAGAGAGCCAAAGATATTGGATCGACATTA
CTGGTTGTTAGCCATGATTACTACACAGATGAAATGAACGCACTGATAAG
GATGATCAAATTCTGTCCGGTAGTTCAGattttctttccattttcaCTGC
AATTATATCCAAATGAATTTCCTGGTCCAAGTCCAAATGATTGTCCAAGA
GATATCAAAAAGCCAGATGCACGTGCGAAAGGTTGTATCAATGCAGAGAC
ACCAGACATGTATGGTCATTATAGAGAAGCACCTATTGTTATGATTAAAC
ATCATTGGTGGTGGAAGATTAATCATGTAATGGACAATTTGGATCAAACA
AAGAAGCACAATGGGCCTTTCCTTTTCATTGAAGAAGACCATTATTTAGC
TCCAAGTTTCGTTCATGCTCTCAGGACgttgggaaatttcaaaaagagtg
ATGCGCGGTGTGCAGGTTCTTGTGAAATCATGACCCTTGGAACGTATAAC
AATAAACAAAATTTCCAAACTGAAGGGAAAAGGGTGATGCGTGGTCAATG
GATCTCATCACAGCACAATATGGGAATGGCCATGTATCGTAACACTTGGA
ACGATCTGAAAAAATGCTCTGagAAATTCTGTGCTTATGACGATTACAAC
TGGGATTGGACGTTGATGCATTTGAGTAAACATTGTCTTCGTAAACAATT
ATTCGTCTTGTTGTATGAGGTGCCAAGGATCTTCCATGTCGGAGACTGCG
GACTGCATCACAAGAAAAAATGTTCCTCAACCAAAGACACTTTGAACAAA
ATCAAAGGAATCCTTGAACGGAATAAAGATTACTTGTATTCCGATCGGAT
TGAACCGTATGACAAACATGCTACGCTAACGTTAAAACCTAACGGCGGTT
GGGGAGATTCAAGAGATCACGAACTTTGTATGAGATACACTAAAGGGAAT
GAGCCTTTGAAATAaATGTGTTACCGAAGGGTGTTAAGGAAGCAAGCCTT
TCTGTTCATATTCATATTGTTTGTTGCACTATGGTTTTTTATAAAATCGA
GAAATTTTGTCACAGTTGACAACGAGTCAAATATGTATTCTAATAGTATA
GACGATAGCAAAGAAACTGATTTGGAATTAGCAagactttcaaaaattga
agCTGAAAAAGAAGCAGTGAGAAACGAACAATTAGCTGAACTTGAGCATC
AAGAAATGATGCGTAAACGTGAAGAGTCACTGAAGCAACAAACTATAGAA
GACGACCCTTTCCATCCAAAACATAACATAGAAAGGGAATACACAGACTT
TagtaattttaaaatcaatttcacACAAACTAACTATAAGCCTGCGGATT
TGAGAGAGGCTGTTAGGAAACTGAATGATGAACAGTTAATTTACAATAAA
GAGATGTTAAAGAAACTACCAAAAGACTACATTGTTATGGTAGTGCAAGT
TCATAAACGTGTAGAGTACTTTAAAGAACTTTTAGACTCGATGCAGAGAG
CCAAAGATATTGGATCGACATTACTGGTTGTTAGCCATGATTACTACACA
GATGAAATGAACGCACTGATAAGGATGATCAAATTCTGTCCGGTAGTTCA
GattttctttccattttcaCTGCAATTATATCCAAATGAATTTCCTGGTC
CAAGTCCAAATGATTGTCCAAGAGATATCAAAAAGCCAGATGCACGTGCG
AAAGGTTGTATCAATGCAGAGACACCAGACATGTATGGTCATTATAGAGA
AGCACCTATTGTTATGATTAAACATCATTGGTGGTGGAAGATTAATCATG
TAATGGACAATTTGGATCAAACAAAGAAGCACAATGGGCCTTTCCTTTTC
ATTGAAGAAGACCATTATTTAGCTCCAAGTTTCGTTCATGCTCTCAGGAC
gttgggaaatttcaaaaagagtgATGCGCGGTGTGCAGGTTCTTGTGAAA
TCATGACCCTTGGAACGTATAACAATAAACAAAATTTCCAAACTGAAGGG
AAAAGGGTGATGCGTGGTCAATGGATCTCATCACAGCACAATATGGGAAT
GGCCATGTATCGTAACACTTGGAACGATCTGAAAAAATGCTCTGagAAAT
TCTGTGCTTATGACGATTACAACTGGGATTGGACGTTGATGCATTTGAGT
AAACATTGTCTTCGTAAACAATTATTCGTCTTGTTGTATGAGGTGCCAAG
GATCTTCCATGTCGGAGACTGCGGACTGCATCACAAGAAAAAATGTTCCT
CAACCAAAGACACTTTGAACAAAATCAAAGGAATCCTTGAACGGAATAAA
GATTACTTGTATTCCGATCGGATTGAACCGTATGACAAACATGCTACGCT
AACGTTAAAACCTAACGGCGGTTGGGGAGATTCAAGAGATCACGAACTTT
GTATGAGATACACTAAAGGGAATGAGCCTTTGAAATAaATGTGTTACCGA
AGGGTGTTAAGGAAGCAAGCCTTTCTGTTCATATTCATATTGTTTGTTGC
ACTATGGTTTTTTATAAAATCGAGAAATTTTGTCACAGTTGACAACGAGT
CAAATATGTATTCTAATAGTATAGACGATAGCAAAGAAACTGATTTGGAA
TTAGCAagactttcaaaaattgaagCTGAAAAAGAAGCAGTGAGAAACGA
ACAATTAGCTGAACTTGAGCATCAAGAAATGATGCGTAAACGTGAAGAGT
CACTGAAGCAACAAACTATAGAAGACGACCCTTTCCATCCAAAACATAAC
ATAGAAAGGGAATACACAGACTTTagtaattttaaaatcaatttcacACA
AACTAACTATAAGCCTGCGGATTTGAGAGAGGCTGTTAGGAAACTGAATG
ATGAACAGTTAATTTACAATAAAGAGATGTTAAAGAAACTACCAAAAGAC
TACATTGTTATGGTAGTGCAAGTTCATAAACGTGTAGAGTACTTTAAAGA
ACTTTTAGACTCGATGCAGAGAGCCAAAGATATTGGATCGACATTACTGG
TTGTTAGCCATGATTACTACACAGATGAAATGAACGCACTGATAAGGATG
ATCAAATTCTGTCCGGTAGTTCAGattttctttccattttcaCTGCAATT
ATATCCAAATGAATTTCCTGGTCCAAGTCCAAATGATTGTCCAAGAGATA
TCAAAAAGCCAGATGCACGTGCGAAAGGTTGTATCAATGCAGAGACACCA
GACATGTATGGTCATTATAGAGAAGCACCTATTGTTATGATTAAACATCA
TTGGTGGTGGAAGATTAATCATGTAATGGACAATTTGGATCAAACAAAGA
AGCACAATGGGCCTTTCCTTTTCATTGAAGAAGACCATTATTTAGCTCCA
AGTTTCGTTCATGCTCTCAGGACgttgggaaatttcaaaaagagtgATGC
GCGGTGTGCAGGTTCTTGTGAAATCATGACCCTTGGAACGTATAACAATA
AACAAAATTTCCAAACTGAAGGGAAAAGGGTGATGCGTGGTCAATGGATC
TCATCACAGCACAATATGGGAATGGCCATGTATCGTAACACTTGGAACGA
TCTGAAAAAATGCTCTGagAAATTCTGTGCTTATGACGATTACAACTGGG
ATTGGACGTTGATGCATTTGAGTAAACATTGTCTTCGTAAACAATTATTC
GTCTTGTTGTATGAGGTGCCAAGGATCTTCCATGTCGGAGACTGCGGACT
GCATCACAAGAAAAAATGTTCCTCAACCAAAGACACTTTGAACAAAATCA
AAGGAATCCTTGAACGGAATAAAGATTACTTGTATTCCGATCGGATTGAA
CCGTATGACAAACATGCTACGCTAACGTTAAAACCTAACGGCGGTTGGGG
AGATTCAAGAGATCACGAACTTTGTATGAGATACACTAAAGGGAATGAGC
CTTTGAAATAaATGTGTTACCGAAGGGTGTTAAGGAAGCAAGCCTTTCTG
TTCATATTCATATTGTTTGTTGCACTATGGTTTTTTATAAAATCGAGAAA
TTTTGTCACAGTTGACAACGAGTCAAATATGTATTCTAATAGTATAGACG
ATAGCAAAGAAACTGATTTGGAATTAGCAagactttcaaaaattgaagCT
GAAAAAGAAGCAGTGAGAAACGAACAATTAGCTGAACTTGAGCATCAAGA
AATGATGCGTAAACGTGAAGAGTCACTGAAGCAACAAACTATAGAAGACG
ACCCTTTCCATCCAAAACATAACATAGAAAGGGAATACACAGACTTTagt
aattttaaaatcaatttcacACAAACTAACTATAAGCCTGCGGATTTGAG
AGAGGCTGTTAGGAAACTGAATGATGAACAGTTAATTTACAATAAAGAGA
TGTTAAAGAAACTACCAAAAGACTACATTGTTATGGTAGTGCAAGTTCAT
AAACGTGTAGAGTACTTTAAAGAACTTTTAGACTCGATGCAGAGAGCCAA
AGATATTGGATCGACATTACTGGTTGTTAGCCATGATTACTACACAGATG
AAATGAACGCACTGATAAGGATGATCAAATTCTGTCCGGTAGTTCAGatt
ttctttccattttcaCTGCAATTATATCCAAATGAATTTCCTGGTCCAAG
TCCAAATGATTGTCCAAGAGATATCAAAAAGCCAGATGCACGTGCGAAAG
GTTGTATCAATGCAGAGACACCAGACATGTATGGTCATTATAGAGAAGCA
CCTATTGTTATGATTAAACATCATTGGTGGTGGAAGATTAATCATGTAAT
GGACAATTTGGATCAAACAAAGAAGCACAATGGGCCTTTCCTTTTCATTG
AAGAAGACCATTATTTAGCTCCAAGTTTCGTTCATGCTCTCAGGACgttg
ggaaatttcaaaaagagtgATGCGCGGTGTGCAGGTTCTTGTGAAATCAT
GACCCTTGGAACGTATAACAATAAACAAAATTTCCAAACTGAAGGGAAAA
GGGTGATGCGTGGTCAATGGATCTCATCACAGCACAATATGGGAATGGCC
ATGTATCGTAACACTTGGAACGATCTGAAAAAATGCTCTGagAAATTCTG
TGCTTATGACGATTACAACTGGGATTGGACGTTGATGCATTTGAGTAAAC
ATTGTCTTCGTAAACAATTATTCGTCTTGTTGTATGAGGTGCCAAGGATC
TTCCATGTCGGAGACTGCGGACTGCATCACAAGAAAAAATGTTCCTCAAC
CAAAGACACTTTGAACAAAATCAAAGGAATCCTTGAACGGAATAAAGATT
ACTTGTATTCCGATCGGATTGAACCGTATGACAAACATGCTACGCTAACG
TTAAAACCTAACGGCGGTTGGGGAGATTCAAGAGATCACGAACTTTGTAT
GAGATACACTAAAGGGAATGAGCCTTTGAAATAa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030738XLOC_030738Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048294-exon-scaffold_142-1491911889:508308..509114TCONS_00048294-exon-scaffold_142-1491911889:508308..509114Clytia hemisphaericaexon
TCONS_00048294-exon-scaffold_142-1510915933:508308..509114TCONS_00048294-exon-scaffold_142-1510915933:508308..509114Clytia hemisphaericaexon
TCONS_00048294-exon-scaffold_142-1575043694:508308..509114TCONS_00048294-exon-scaffold_142-1575043694:508308..509114Clytia hemisphaericaexon
TCONS_00048294-exon-scaffold_142-1491911889:509496..509593TCONS_00048294-exon-scaffold_142-1491911889:509496..509593Clytia hemisphaericaexon
TCONS_00048294-exon-scaffold_142-1510915933:509496..509593TCONS_00048294-exon-scaffold_142-1510915933:509496..509593Clytia hemisphaericaexon
TCONS_00048294-exon-scaffold_142-1575043694:509496..509593TCONS_00048294-exon-scaffold_142-1575043694:509496..509593Clytia hemisphaericaexon
TCONS_00048294-exon-scaffold_142-1491911889:509952..510051TCONS_00048294-exon-scaffold_142-1491911889:509952..510051Clytia hemisphaericaexon
TCONS_00048294-exon-scaffold_142-1510915933:509952..510051TCONS_00048294-exon-scaffold_142-1510915933:509952..510051Clytia hemisphaericaexon
TCONS_00048294-exon-scaffold_142-1575043694:509952..510051TCONS_00048294-exon-scaffold_142-1575043694:509952..510051Clytia hemisphaericaexon
TCONS_00048294-exon-scaffold_142-1491911889:510402..510532TCONS_00048294-exon-scaffold_142-1491911889:510402..510532Clytia hemisphaericaexon
TCONS_00048294-exon-scaffold_142-1510915933:510402..510532TCONS_00048294-exon-scaffold_142-1510915933:510402..510532Clytia hemisphaericaexon
TCONS_00048294-exon-scaffold_142-1575043694:510402..510532TCONS_00048294-exon-scaffold_142-1575043694:510402..510532Clytia hemisphaericaexon
TCONS_00048294-exon-scaffold_142-1491911889:510876..510960TCONS_00048294-exon-scaffold_142-1491911889:510876..510960Clytia hemisphaericaexon
TCONS_00048294-exon-scaffold_142-1510915933:510876..510960TCONS_00048294-exon-scaffold_142-1510915933:510876..510960Clytia hemisphaericaexon
TCONS_00048294-exon-scaffold_142-1575043694:510876..510960TCONS_00048294-exon-scaffold_142-1575043694:510876..510960Clytia hemisphaericaexon
TCONS_00048294-exon-scaffold_142-1491911889:511300..511389TCONS_00048294-exon-scaffold_142-1491911889:511300..511389Clytia hemisphaericaexon
TCONS_00048294-exon-scaffold_142-1510915933:511300..511389TCONS_00048294-exon-scaffold_142-1510915933:511300..511389Clytia hemisphaericaexon
TCONS_00048294-exon-scaffold_142-1575043694:511300..511389TCONS_00048294-exon-scaffold_142-1575043694:511300..511389Clytia hemisphaericaexon
TCONS_00048294-exon-scaffold_142-1491911889:513154..513278TCONS_00048294-exon-scaffold_142-1491911889:513154..513278Clytia hemisphaericaexon
TCONS_00048294-exon-scaffold_142-1510915933:513154..513278TCONS_00048294-exon-scaffold_142-1510915933:513154..513278Clytia hemisphaericaexon
TCONS_00048294-exon-scaffold_142-1575043694:513154..513278TCONS_00048294-exon-scaffold_142-1575043694:513154..513278Clytia hemisphaericaexon
TCONS_00048294-exon-scaffold_142-1491911889:513762..515215TCONS_00048294-exon-scaffold_142-1491911889:513762..515215Clytia hemisphaericaexon
TCONS_00048294-exon-scaffold_142-1510915933:513762..515215TCONS_00048294-exon-scaffold_142-1510915933:513762..515215Clytia hemisphaericaexon
TCONS_00048294-exon-scaffold_142-1575043694:513762..515215TCONS_00048294-exon-scaffold_142-1575043694:513762..515215Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048294-proteinTCONS_00048294-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_142supercontigscaffold_142:508308..515215 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
23.6701	23.2066	10.5	9.37955	10.691	7.60113	11.7456	12.434	11.5194	12.1458	10.356	7.59157	7.47102	6.35603	6.43851	6.42267	13.029	10.6142	5.69788	10.1349	9.856	9.18271	20.5585	20.876	13.6022	12.7167	5.8119	4.83088	10.1766	10.2064
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR029044Nucleotide-diphossugar_trans
IPR007754GlcNAc_II
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0005795Golgi stack
Vocabulary: Molecular Function
TermDefinition
GO:0008455alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009312oligosaccharide biosynthetic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009312 oligosaccharide biosynthetic process
cellular_component GO:0005795 Golgi stack
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity
Blast
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BLAST of TCONS_00048294 vs. Swiss-Prot (Human)
Match: MGAT2 (Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase OS=Homo sapiens GN=MGAT2 PE=1 SV=1)

HSP 1 Score: 357.836 bits (917), Expect = 1.298e-112
Identity = 162/358 (45.25%), Postives = 232/358 (64.80%), Query Frame = 1 
Query:  568 REAVRKLNDEQLIYNKEMLKKLPKDYIVMVVQVHKRVEYFKELLDSMQRAKDIGSTLLVVSHDYYTDEMNALIRMIKFCPVVQIFFPFSLQLYPNEFPGPSPNDCPRDIKKPDARAKGCINAETPDMYGHYREAPIVMIKHHWWWKINHVMDNLDQTKKHNGPFLFIEEDHYLAPSFVHALRTLGNFKKSDARCAGSCEIMTLGTYNNKQNFQTEGKRVMRGQWISSQHNMGMAMYRNTWNDLKKCSEKFCAYDDYNWDWTLMHLSKHCLRKQLFVLLYEVPRIFHVGDCGLHHKKKCSSTKDTLNKIKGILERNKDYLYSDRIEPYDKHATLTLKP---NGGWGDSRDHELCMRYTK 1632
            R  V +LN +Q + N +         +V+VVQVH R EY + LLDS+++A+ I + L++ SHD+++ E+N LI  + FCPV+Q+FFPFS+QLYPNEFPG  P DCPRD+ K  A   GCINAE PD +GHYREA     KHHWWWK++ V + +   + + G  LF+EEDHYLAP F H  + +   K+ +      C++++LGTY+  ++F     +V    W S++HNMG+A+ RN +  L +C++ FC YDDYNWDWTL +L+  CL K   VL+ ++PRIFH GDCG+HHKK C  +  +  +I+ +L  NK Y++ + +   +K   + + P   NGGWGD RDHELC  Y +
Sbjct:   92 RSLVYQLNFDQTLRNVDKAGTWAPRELVLVVQVHNRPEYLRLLLDSLRKAQGIDNVLVIFSHDFWSTEINQLIAGVNFCPVLQVFFPFSIQLYPNEFPGSDPRDCPRDLPKNAALKLGCINAEYPDSFGHYREAKFSQTKHHWWWKLHFVWERVKILRDYAGLILFLEEDHYLAPDFYHVFKKMWKLKQQE---CPECDVLSLGTYSASRSFYGMADKVDVKTWKSTEHNMGLALTRNAYQKLIECTDTFCTYDDYNWDWTLQYLTVSCLPKFWKVLVPQIPRIFHAGDCGMHHKKTCRPSTQS-AQIESLLNNNKQYMFPETLTISEKFTVVAISPPRKNGGWGDIRDHELCKSYRR 445
The following BLAST results are available for this feature:
BLAST of TCONS_00048294 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MGAT21.298e-11245.25Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglu... [more]
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