XLOC_030488 (gene) - C. hemisphaerica

Overview
NameXLOC_030488
Unique NameXLOC_030488
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_139:380139..386547-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030488 ID=XLOC_030488|Name=XLOC_030488|organism=Clytia hemisphaerica|type=gene|length=6409bp|location=Sequence derived from alignment at scaffold_139:380139..386547- (Clytia hemisphaerica)
AATGGTTGTTTACAATTTCTTCCATTCTAGAATTTATGATTCTTTTAATA ACAACTTTGAAAATGGAGCAAAAAAGATACACACTTTTACCAAAACAAAC AGTTGATAATTGGGTTGAAGCAATTGGTATCAACAAGATCCCAGATGAGG TTTCAGAAATTTTGTCAGAAGACATTACTTATCACATCAGAGAGCTTGTT CATGTAAGTACATCTACTATTATACAACTTTGAATTCAAAAGAGTGCTCA ATGTGATTTTTTAGAGCGGTATCATGTCCTCGCATCAAAATAAAAAAGCT TTCTTTAAAGTCCATTTTTTGGAAAATTGAGTTATGACCATACCGTACCG ATGCTTTACACCCCATTTTTTACCATCTTTTTGGCTTAAATCCATCAATC CAAATGCTTTTAGAAAAATAAGAAATTTAACTTTTCACTTAAGAAAGTCA CATCAGTTTAGGGCAAAAAAGCCTTAAAACCAGTGTGGAAACAATTATGG ACCCAATGCTTTTTTAACACAAGCAAAAAACTTTGAGTTGGAAAAAGTTT TCTCCTTTTATTTTTTGAATATTAAGCACATCTACTATCGTTTACAAAAC ACTTTTGAGCTTATGATGAAAATTAGAATTCAGAAAGTTGTCTTTTGATA GATCAATAACAATAGAAGCATTATATTAATAGAAACAAATTATCTCCATT ATTTCAATTCAATCCAATTATTTTCACATTTTACTCCAATGATAGACTGT AAATTTAATGAGTCTATATATTTTTTTTTATTTCAAGAAATCTATCCAGA TTATGAAGCATAGTAGAAGGTCCTACCTCTCTGTAGACGATATCAATTCA GCTCTTCGAGAAAGTGATACTGACGTAAGTATAATTAAGAGTATCAATAA GTGGTAGATGATTTCATCAAAGAGCACTTGATGATCAGGACCAGAAATTT ATAAAGTTTACAAGAAAAAACAAAATTGAATCACATAGTACTTCAAGTGT CATCTTTATTGAATCATCAGCTATCAAATGAAAAATGACAGATGCTATGC TTTTATTTTTAAAAAAAGGGGATAAAACGTAAAAAAAATGTATAATTGTC AGAATAAATTCCTAGGGTCACAAGTATAAAATGATAATTCCCTATAGACT TTTTATATATAATGCATGAAGATCACCATTTAGACTTATAATTTGCTTAT AAAAATTTATTTTCATTACGGCATTTAGAAAAATACTAGTCCAGACTAGT CAAGTTCTTTTGTTTAAAAGTTCCTTTTGGCGAGGATAATTCAAAATCAA TCATATTTTTCTTGTAAAGGCATAAATTACAAGATTTCAACACATTGGTA TACGATTTTATCTCTTTTAATGATCGACCATTTAAAATTGGGGGATTTTC CAGCTGATTATAGGTCCCATACATAAGTTGAATGCCTTGTTGTGGCATAT GTTCATTGATTATGGTTTTAATTTGACGTTCAGTTAAAGCAATGTAAGCT TTTGTGGGTGTGTTTTGTGCTGTAATGATGCATTTGTAGATAACAGGTAT TTTCTACAGTCTCCTTGTAGTTGACATTCATTTTTGTTTCGGCAAGAATA TCTACTCATTAAAATTCCAAAATGTTCTTGAAAATCTAAGATATATTCAA CTATAGGGAGGAAAGGACAGGCTTGGTTGGCATCAAACAATTCTGGCCTG TTCTGACCTATCACACAATGAACAAAACCAATTAAGACACTTTTATTGTT CCATGTAGTTTTATTCCATTTTTTTGTAACTTTTAAATCACTCTGGACAG TCTGTGCCACTTGCTCGATCGGGAAGATTCTTCCGAAATGGGAAGAACTT TCCCGAACGGGTAATTAACTTGACACCCAAACGGGTAAGAGTTAAAAAAC GGACTTCTAGATCGGGAAGAAGCGGGAAAATAAGGAAAACTTGATCGGGT TGGAACTTCCCATTTGGGAAGTTTACGCAGTTTTTTCACAATTTAACAAG ATTTCTACGGTAAGGTTTACTTTCCTTTCGGTGAAAAACCTTAAAATTTG ATGCTTTTTCACCTCCAAAAAGTTCCAACTTTCGCCGGTCATCGTACAGC TTCGCCGAAGATTCAGTCAATTTTCAACTTCCCAAAAAGGAAGAATCTTC CCGATCGAGTTAGTGGCGCAGACTGCTGGAGGCTTATTAAAACATCACAT CAAAATCCCGAAAAAAATCAAAATCNAGTGGTGCAGACTGCTGGAGGCTT ATTAAAACATCACATCAAAATCCCAAAAAAAACAAAATCTTTTTTCTTTT TAGCCAATTTTTGGACATTCTGGTATTGAACCATTCAACTTCAAAGCTTT TCATACTAAGGAAGGAGCAAAAGTTTGCTACTTGGATGAAAAAGATGTCA ATCTGAGAGAAACCGCTTTTGATTCCTCTCTGCCAAATGAAGCCGGTGAA ACAAGTGTTAAAGGTATCTGAATTTAAAAGTTTTTCTCTTTTTATTTTCA CCTGCAAAAGTATATTGAACCTTGATTTTATCAATCAGTTATAATCTTTT TTTTTCAGCAAACTGGCTTGTTCTTGAAGGTTACAACTGCAATTCAAGAG GTAAGTTATATTTTATCGAACCCCAACAAAATTTCTGTAGAAGTTGACAA AATATAGTCTTTATTAAGCATAGTCTAGCATGCTAGGCCACTAATTTAGA CAAAAAATCATAGAAGGGATAAATTTAAGTCAATTTACAAATTGATATTA TCTCGTAGTAATTATCTTATCATCATCTAACACCGTATTACATGTATTAT GAACTCGACTTCAGTCTGCCTTGCGTAAAATTCTAAAGTGAACAACGTTA TTAGTAAGATTGCGACTTTTTTTTCATTTTAGGCCATCTGCAAAAGGATT TAGAACCCCCTTTGAATGAGGTACTGCATTAAAAATAAAATATATATAGA TTTTGAATTATTATGCTAATTTTTCTTTTGCTCCTCCACTTTCGACACAT AAAAGCTGAAGATCTACTTTTTAATTTTGTCTTCATTTTATACTAGGTCA TGTCCAAATACCTCCAAAATGTCACAAGAGCCCTTATCTCAGAAGGAGAT CAGCTTCGAAAGGTAACTTTGGTTTTCTTTCCCTTTGTATTTTTACCCCA TACATTTTTTCAAAAGATAATTCAAACTTATTAAGTGCATTAACTTAAAA TATTCAAATTGTTTCAAATGCACATGCACATCCCAACTCCAACGGGAAGA AATAACTCAACTTTATTTGGGTGGTAGTTTGACACGCGTTTTCTGAATTT TAATTAGCTTTTTCAGATAAAAAAAACAAACAGGGGAATAGGTTGCGACG CTTACCGGTACAGGACCGAAAAAAAATTAGTAATCCCAGATGATGATAGT GGCACTTTTAATGGGTTAAATCTATAGCTTGTCCGTTACACTCGAAGGAT ATTGTCAAACTTTAACTGTTTTTCTATAGAAAAACAAAATANTGGAAAAG ATTTTGTCGCAGTTTAAATGTTTTTTTCATAGAAAAAACAAAATGCTTTT GATTCATTATTTGTAGGTTGCATTGGATGACCTTTGTTCCAATAAGAAAT TACAAATCATCATTCCTCACCTGATATCCTTTTGCTCAACACAGGTAAAT AATTATGCTCTCTTAACTTTTTGAACTCTGATTCTAACGGAAAGCAAGTA CAAACTAATTTATGTTTTAAAATATTGTCCTGCCAAGGAGATTCTCATTT CTCTTTCAAAATCAATTTTGTTGCACAAGTTGTGTAAATCATAGCTGGAG TATATTTTCACATTTTTATTTATATATAAGTTTAATAAGGGCAGGTTTCA AAAGCTTAATAATAGACTCCAATAAGTCAGCTGTCCAAGATTTAGAAAGT ATTTTTTAGAGGCATGACAAGTCGATAAATTAAAATTGTCAACAAAATTG TGTTATTATTGATTAAAAACTTCAAGGTTCTTATCAGTATATAGAGTTTT TTGTATCTCGTTTAGATCAAGCAACATACTGGAAAAGAGACATTCCCATC CATTGCAACGCATATAATCTCGACAATTAATGCTTTAGTCAAGAACCATT CTGTTATCCTAACTCCTTATGTAAGTTAGTTTCATTGTGACCTTATCTTC AAAGAAAGGGTATACAGTACATGATTTTCAGATTTGAAAACTGATTTCTA CCTGTTTTTTTTTTTTTTTTTTTTTTAAAAAAAAAAATTTAAAGGGAAGG GGCCTTTTTTTTCCAACAACAATATCTTCGTTAAAATTTTAAAAATTTTT TTTTCACTTTTTTTTTTTTTTTTTTTGTATAAAAATATTTACTAGTAAGT GTCCATTTTGTTCCGACCACCATATCTTCAGTAAAAATGTAAAAATTAAA TTGATCCTGAGTTTCAAGCCTAATGACACTATCTTATCTTGCTTCCATAG ACCTTGCCCAAGAGACTTGATCTTCCCCTACTCTTCTGAAATATTGCTTA AAACCAGGCTAGTTTCGATAGCTTGCATAGGTTTAAAGACTTTGAAATTT ATACTATCGTTTTTTTTTTCTAAAACCCTTTTATCATAGAGTTAGATTTT ATATTGTCTACCCTTAGCTGATCCAGTTGGCGAAAATTTTGTTGTTTACA TTGATGGAAGCGAAGATAGAAGCTCAACACTGGTATCTTCACCAGAAGGC TGCCACAGTTCTCTCACTACTGGCTAGGTAAATCAGTTTTGATCTCATTG ATGACATTTATGTCTGTGGTGCTCCCAACAAGTTTCAACATTTTTAATTC TTCTTTGTTTTTCTTTTTAATTCTTTATACCTTCCTATTTATTAGAAAAA CAAAAGTCTTTTCAATAATAGCTCAGAATTTTATATCGAAGCTCGACATG AATTTACATCTTTGACCACCTAATTTATCACCAGGTAGAACTTTGTTTTT TCACTCGCAAATTTCGATCAGTACATCTTTGTTTTACCTCCCCTTTCATT TAGGACCACGGTAATTAAATGAAACCTTTATTTTTAAGGAGACACCCCCA TTCTTCACCGGATATTCGTGAACAACTCTTGAAATCATATCTCGATACTT TCACTGATCCGACTTCGAAACAGATGGCACAATTACACGGTGCTCTATGT GGAATCACTCAACTCGGAATAACAGTAAGGGGAAAACTTTTGTTTTAGCA TGTTTGTTTTAGTCTTATTATTGTTAAATACACGTGACCTCAATACCAAC ATCACATTTATTACACGTGACCAATTTGAATATTGTACACGCCCGAACAA TCAGAAATAAAAACACGATGCCAATTTAAACTACAACTTAAGTAACCTAA TACCTTAGATACTTACCGCGTCCCTTACTTAGGTGTTAGTTATCTTTGGT TTGGTGTTCTTTTAAAATTGTGGCATTTTTCCCCTTAGGCAATAACAAAC GGTTTGTTCCCAAAGATATTTGAGAAAATGGAGATCTTACAAAAACACCT AACACCAACAGATGATTTACAAGGTTCACCAGAACTTCTCCATGTTACCA ACCAACTAAATGAAACATTATCCATACTGTTCCAGTCTAGTTGCTTCCCT TACGTCAAACAACTTCATAAAAAGACATCTTCAAAAATGAGTAAACTATA CGCTGAACTTAATGAATTATTTGGTGAATCATTTGTTCTGAAATGTAATC TAAATGCACCGAAAAATCCGGAGCCACCAGTAAATGACAATTTATATAAC AGTCTTGTTACTCCATTACCTCCTAAGCAACCATCACTGGCTAACGACCA AGATAGTACAAATGGGAAATTCTTAAGGTACGAGACACTAAAAAAGACAT TAATATCACGAGATTATAATATTAAGAATACCCACGTTGGCAATATCACA GTCAAAACGAAATGGAGAAAAAAGAACCTATCAAAAACAAATATACTAGA CCAAGGTAATTTTATCTCTGATAAAAGGAACCATCAAAGTTTGACCAAAA CAACGAGGGGGATACATAAATCTTATGGTCGTAAGAAGAGAAATATATCG CAGAAAATATATTTGACTATGCTATAGTGATTAAAATATTGTTTTTCGTA TTTAGTTATTGTAGTGTTGATTGTAATTTTAATGTATATAATCCTAAAAA CATTCGAAACGACCTGTATTGTGAAAATTTTACCAACATAATTTTGATGT TAAAGGGGAATATCAATTTTACACGTGATATTTGGACTGTTCCTTGCTGC TATACCGCCCTAAATGATTTCCTTATCTTTTGAACCTCTGTAAATTATCC ATCATAATCAATGCGATTAGTATACTAGTAATCGTCTGTGGAAATATTTT GTTATATTTTTATATTTTCATAAACATTCGATTCGAAAACCTCATTTTGT TCTTTTGTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047918TCONS_00047918Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00047918-proteinTCONS_00047918-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_139supercontigscaffold_139:380139..386547 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TAF6transcription initiation factor TFIID subunit 6 isoform epsilon Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
26.76 24.74 9.58 8.12 13.87 10.71 13.73 14.34 9.4 9.91 10.88 7.58 9.44 8.01 7.74 9.53 8.64 12.72 7.58 7.66 9.87 9.07 40.54 35.1 15.01 15.28 7.62 8.34 25.67 30.82