TCONS_00014938 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014938
Unique NameTCONS_00014938
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3505

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014938 ID=TCONS_00014938|Name=TCONS_00014938|organism=Clytia hemisphaerica|type=transcript|length=3505bp
CCGTCATGCAGCGCGTTGTACAGAAGTAGAATTTGACTACAGTTTCGAGA
GAATAAGTTTATAATAATATACGCATACATATACAAAGTGTACTTTTACT
GAAGCTACTTGGCAAACTATTTTGCCATTAACCCATCACCTTCTTGTCTT
CCAGAtagtaaacaaaaacaaacagaaacaaCTCCATCTGTCAAAACCGC
TACCTCCAGGATGCATCCAGCCATCCAACTACTCTTCGTCACTCTCCTAC
CATACCTTGCTCTAGCCACAGTCGAATATGATAGGGATGGAGGCTACATC
ATTGGTGCCATCTTACCATTAACTATAAATGGCCCAGATGGAAAATGCTC
TACTCTGAATCCTGAAGGTGCTGCACACGCGGAAGCCATCAAACTCGCAG
TGGATCAGATTTCTGCATCCTCCAGATTCACCAGTCTCATTTCGTCCACC
AGTATTGGATACAACATACGTGATAGTTGTAGTGATTCAGTGGTCGAACG
GAAAGTCATCTACGAATTCAACAAAGCCGCACTGGCATACGCAACAAACA
ACTCTGCACCCAAACCTGTGGATATCGTCTTATCAGCTTTCAATCTGGAT
TCTGTGAACTCATTGAATTTATTGAATGTCGAATCCATCCCACAAATCAG
CTACTCAAAGGATAACGCTAaattgatgcaagtaaccagtGCACAAGGAT
TAGCAGTCCAAAACTTGATCAGTGTTTACCCTGAGAATACAATGGCTGTA
CAAGTGGTGATCGACCTTATCAACGAATTAAACTTACAATACGTTCACGC
TATCTTCTCCGATGACTACCAGGGAAAACAAGCATCCAAATTGTTGACCG
ATTCTTTGAAAACCAGCCAGAACTGTGCTGATGTTTACAATCTAGATGAC
AGCAATATGGACTCTACCATTGCTACAATGAAATCAAAACCCTTGATCAA
AGTGATTGTTATGCATTGCGCAAAAGACGTCGAGaaaaaattttaccaaa
aacttATAGATGAGGATATGTCcgattatatcattttttccACTCAAGAC
TGGAGCAAAGAAGGGGATTCCCTGGTACCATACAGCGACNgattatatca
ttttttccACTCAAGACTGGAGCAAAGAAGGGGATTCCCTGGCACCATAC
AGCGACGTTACTCAAGGAATGATCTACATTCACCCAGACAGGGATACCCT
CAATTTTGAGGGTCGCATTGGAAGTGTGACCAGACCTTACACCAATTCAC
CATGGTTGAAAGCTTTATATGACAGTTATGGCGGCAACACACAAGCTGAG
GATAAGGTCAAAAGTGAAGTCTCCAAAGCCTCGTCGTCAGCCATTTACAG
TTATGAATCCATCTACACTATTGCTGAAGGATTACTCAAAGGACGTGATT
TGTTAGAGAAAGTCAAAGGTCTTGAACTAGTCATCGAATATCTTGGACGA
AATGATTTGAGATTCAATGATCACTTGATCGCTGAGGGTACAAGGTACGT
CTTGAAGAATGTCAAGAAATCATCTTCACAAGGTGTTTTTGTTGGATCAT
GGGAGAACCAACCGAACAGAGAACCATTGAGGTTGAGCAAACAAAACATC
GAGTGGAAGAACGGTAGCAAAGAAACACCAGTCTCATCGTGCAGTGAGAC
ATGTGCATTGGGTTTTTACCGAGAATTCACAAATGATGTCATCAAATGTT
GTTGGGATTGTAAAGCTTGTCCGAACGGCACCTTCAGCAACATCACCAAC
TCGAACACTTGTTTGACACCATGTGAAGGTTGTGTTGCAAAGCCAGACAA
AACAGGATACGTCAAGTAcgaagttcaaaatttcaaatggtTTGGTCCAA
AAGGCTCCTTCTTAATCTTCTTGATCGTCCTCGCCTCTTGCTTCATCTTG
CTGGCTCTTGGTATCATCAGCCAAAACTCTGATCACGAACTCATCCAATT
ATCTGGCTACAATCTTCTGTGCTTGTATCTGATTGGTTGTTTATTGTTAA
CCCTTGCACCAATCCCATTGCTTGTTACACCGACAGTGAGTTCGTGTAAT
GGTTACATCGCAGTCATGAACATCGGGTTGACGGTCATTTTTGCAGTGAT
GATGACGCGAACAAGTTACGTCAACGACTTCTATGATGAAAACGGACAAG
TTGTGAAAGGTGGTTTAGGAAAACATCCACGTTTCATTATCATCATGACA
CTCATCTTCATCCAAGCTCTCATCCTCATCATCGTCAACAACCTGTACCC
ACCGCAAACAATGCACAGCGCCACCGATAATTACGCCGTAAAATACGCCG
AATGTTCCAGCTGGGCTTCCTGGGGATTCTGGGTAGCTTTCTCCTTCAAC
ATTGCTTTATCGTTGATCGGTAACTTCATGTCGTGCTCTTCCACCAAGAT
GGAGGACATCTGTGAAGAACTTAAATGGTTGCTTATCACTTATTTGATCT
TCTACATGAATGGTTTAGCTGAAGTTATCATCTTCTACCGTGTCCGAAAC
GAGCAATTAGCTGTCGGACAAGCAGTCATGTGCATTCTCATGGCCAtgtc
tttctattttttcttcatCTGGCCCAAAGTATGGTACGTTTTGTTCAAAT
CTAAAGATGGGAAGATTCAGCGATCACCAGAACCCATTCCCCAAGACGAC
GATCACATGACTACAGCCATCCATAGTTCAGACGCTTTCAAACAACATGG
CGTTGTGCAGATGAGATTGAAACAAAATGACGCTGAAGCCTAAATAGAAC
GGATGGTGAACGAATAAATAATGTTCCTTGCTGGACATACTGAGTGCTTT
CTAATGACGAAGCTCATAGATTGATGTTCAGAAGAATGACGAGGTCAGTT
TAGGTCAAAGAAGACCACCACGTGAGAGAACATTAAACAAACAAGTAAAC
AAATGAACATACCTAACAATTACCGTCCAAACAACATCTTTTGGATTGTC
TTTTAACGTTAATGTCTGAGTAATGTGTTCTTTTAGCTTtaactgaaata
aaaaattaatgttgagttttttagtgatttgaCCAGAGGGGGATTTCATG
AAAAGATCCAAGGCAGTCCAAAGATTACAGTGTCAGAATATCTTTTCCAT
GAAGAATTGCCAGGTCAAGCTAATAcaagaaaaattcttaaaaaccaTTC
TAGAAAGACAATTCAAAAATAGTATGACGAAAGGAAAAAACTTTTAGGAC
ATTTATACAAAAGATGAACAtattatacatatttttttccCAACAGAAAT
GAAAGTTTGTTCCAAAAGCTATGATCGCATTAATTTATAACCCTGTGTTT
CAAATTTCTCAACATGACAAAGCTTTTCGAACAGACTTTAAAAGAATTTA
AGAgaatttttgtaatattttttacattataataattataattttattta
caaGATGTATAGTCCTTTTTATAGATAATGACTGTAACACTTTTAAACTC
TCTCCTAATGTGCTTACGCGTTTAAACATTtagttttcaaactttttgtg
aTTTC
Run BLAST on NCBI

protein sequence of TCONS_00014938-protein

>TCONS_00014938-protein ID=TCONS_00014938-protein|Name=TCONS_00014938-protein|organism=Clytia hemisphaerica|type=polypeptide|length=577bp
MRICPIISFFPLKTGAKKGIPWYHTAXDYIIFSTQDWSKEGDSLAPYSDV
TQGMIYIHPDRDTLNFEGRIGSVTRPYTNSPWLKALYDSYGGNTQAEDKV
KSEVSKASSSAIYSYESIYTIAEGLLKGRDLLEKVKGLELVIEYLGRNDL
RFNDHLIAEGTRYVLKNVKKSSSQGVFVGSWENQPNREPLRLSKQNIEWK
NGSKETPVSSCSETCALGFYREFTNDVIKCCWDCKACPNGTFSNITNSNT
CLTPCEGCVAKPDKTGYVKYEVQNFKWFGPKGSFLIFLIVLASCFILLAL
GIISQNSDHELIQLSGYNLLCLYLIGCLLLTLAPIPLLVTPTVSSCNGYI
AVMNIGLTVIFAVMMTRTSYVNDFYDENGQVVKGGLGKHPRFIIIMTLIF
IQALILIIVNNLYPPQTMHSATDNYAVKYAECSSWASWGFWVAFSFNIAL
SLIGNFMSCSSTKMEDICEELKWLLITYLIFYMNGLAEVIIFYRVRNEQL
AVGQAVMCILMAMSFYFFFIWPKVWYVLFKSKDGKIQRSPEPIPQDDDHM
TTAIHSSDAFKQHGVVQMRLKQNDAEA
Run BLAST on NCBI

transcript from alignment at sc0000201:315835..320886+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014938 ID=TCONS_00014938|Name=TCONS_00014938|organism=Clytia hemisphaerica|type=transcript|length=5052bp|location=Sequence derived from alignment at sc0000201:315835..320886+ (Clytia hemisphaerica)
CCGTCATGCAGCGCGTTGTACAGAAGTAGAATTTGACTACAGTTTCGAGA GAATAAGTTTATAATAATATACGCATACATATACAAAGTGTACTTTTACT GAAGCTACTTGGCAAACTATTTTGCCATTAACCCATCACCTTCTTGTCTT CCAGAtagtaaacaaaaacaaacagaaacaaCTCCATCTGTCAAAACCGC TACCTCCAGGATGCATCCAGCCATCCAACTACTCTTCGTCACTCTCCTAC CATACCTTGCTCTAGCCACAGTCGAATATGATAGGGATGGAGGCTACATC ATTGGTGCCATCTTACCATTAACTATAAATGGCCCAGATGGAAAATGCTC TACTCTGAATCCTGAAGGTAAAGATTCAATTTAATGATTGATTAACAATT TGTGAGTAAATAAAAGCTTTTGCTGCCTTTTGGTTCTACATAATGAACAA CGATCATAACATGGCAAGTAGAATAATGTGTCAGTCTCAGTATTCAGTGT CACAAGCATTTTCCAAATTTCGTGGCCATTGCAGAACAAGCTGAAACCAG TAAAACCAGCGAAAAAAATCCACAAGagtttcctttgttaatatgcCCTG CAAACTCTTTGAAATCCATGAAAGATTCCACAATCTTTATGGTGGGCTAA CTTTTTTCCTGCGGTAACTTCCTTACCAAAGCCTCAGTTGCTTCATTACC AAACCCTCAGTAACTTCCTTTCTAAACCATCAATTGCTTTCTTACTAAAG CCTCAGTTAATTCCTTTAAATTATACTAACGCAATCAATTCAGGTGCTGC ACACGCGGAAGCCATCAAACTCGCAGTGGATCAGATTTCTGCATCCTCCA GATTCACCAGTCTCATTTCGTCCACCAGTATTGGATACAACATACGTGAT AGTTGTAGTGATTCAGTGGTCGAACGGAAAGTCATCTACGAATTCAACAA AGCCGCACTGGCATACGCAACAAACAACTCTGCACCCAAACCTGTGGATA TCGTCTTATCAGCTTTCAATCTGGATTCTGTGAACTCATTGAATTTATTG AATGTCGAATCCATCCCACAAATCAGCTACTCAAAGGTAAACTATACTTG TGCAAAGCCAACAGTATCCTCCACTTTGTGTTGTAAGCATGCAAGAAAAT CGGGCTGGAGCTCAATTATGTACCAGCCTAATTGtgctttaaaaaagaag aaactattATGGATATATTCTCACGGCAAGTACTGTGGATCTACCTGATA CAAAGAACAAGTGTGCTAATGTACTTATCTTGACATATCTCATAGACCGT TACGGGTTAAACGTACTTTTCTTGACATATCTCATGGACCTTTACGGGTT AAATGTAAATAAGAGGAACGGTTATTCTTTCCTTATTACTTACAACTTTC TCTCTTCATAACAGGATAACGCTAaattgatgcaagtaaccagtGCACAA GGATTAGCAGTCCAAAACTTGATCAGTGTTTACCCTGAGAATACAATGGC TGTACAAGTGGTGATCGACCTTATCAACGAATTAAACTTACAATACGTTC ACGCTATCTTCTCCGATGACTACCAGGGAAAACAAGCATCCAAATTGTTG ACCGATTCTTTGAAAACCAGCCAGAACTGTGCTGATGTTTACAATCTAGA TGACAGCAATATGGACTCTACCATTGCTACAATGAAATCAAAACCCTTGA TCAAAGTGATTGTTATGCATTGCGCAAAAGACGTCGAGaaaaaattttac caaaaacttATAGATGAGGATATGTCcgattatatcattttttccACTCA AGACTGGAGCAAAGAAGGGGATTCCCTGGTACCATACAGCGACNgattat atcattttttccACTCAAGACTGGAGCAAAGAAGGGGATTCCCTGGCACC ATACAGCGACGTTACTCAAGGAATGATCTACATTCACCCAGACAGGGATA CCCTCAATTTTGAGGGTCGCATTGGAAGTGTGACCAGACCTTACACCAAT TCACCATGGTTGAAAGCTTTATATGACAGTTATGGCGGCAACACACAAGC TGAGGATAAGGTCAAAAGTGAAGTCTCCAAAGCCTCGTCGTCAGCCATTT ACAGTTATGAATCCATCTACACTATTGCTGAAGGATTACTCAAAGGACGT GATTTGTTAGAGAAAGTCAAAGGTCTTGAACTAGTCATCGAATATCTTGG ACGAAATGATTTGAGATTCAATGATCACTTGATCGCTGAGGGTACAAGGT ACGTCTTGAAGAATGTCAAGAAATCATCTTCACAAGGTGTTTTTGTTGGA TCATGGGAGAACCAACCGAACAGAGAACCATTGAGGTTGAGCAAACAAAA CATCGAGTGGAAGAACGGTAGCAAAGAAACACCAGTCTCATCGTGCAGTG AGACATGTGCATTGGGTTTTTACCGAGAATTCACAAATGATGTCATCAAA TGTTGTTGGGATTGTAAAGCTTGTCCGAACGGCACCTTCAGCAACATCAC CAACTCGAACACTTGTTTGACACCATGTGAAGGTTGTGTTGCAAAGCCAG ACAAAACAGGTGAGCGAATCATCCATGACTTCCATATTGATTCGGGAACA TTATATAGATATACTGAAACTTCATCTATATATTTAAAATTGAAAGTGCA ATTAGGGAGTTTAAAATGCACCTAACTCCTTCTCGTTTACTGAAAAAAGA CCGCggcaagatttttcaaaattataataaaaaaccaCCCGAGGGAGGAG TGGTATAGGCTAGAAGTTTATACTGAAGACATTGTTTTTTGATACGAAga taatttcattttgaagtaaTTACCTTTTTTTCATAGGATACGTCAAGTAc gaagttcaaaatttcaaatggtTTGGTCCAAAAGGCTCCTTCTTAATCTT CTTGATCGTCCTCGCCTCTTGCTTCATCTTGCTGGCTCTTGGTATCATCA GCCAAAACTCTGATCACGAACTCATCCAATTATCTGGCTACAATCTTCTG TGCTTGTATCTGATTGGTTGTTTATTGTTAACCCTTGCACCAATCCCATT GCTTGTTACACCGACAGTGAGTTCGTGTAATGGTTACATCGCAGTCATGA ACATCGGGTTGACGGTCATTTTTGCAGTGATGATGACGCGAACAAGTTAC GTCAACGACTTCTATGATGAAAACGGTAAGAAGGGAAGTTTGTTTAACGA CTCTTTGGAATTTCTTCATGTAAAAGATTCAAAAGACAAATCTCTATCCA CACTTCTTTTTATTACTCCACAGTGCCTAAAAAGGGAGTTGAATAAATGG AGGGAAGGAGTCGTATTAGAAAGGTTCAAACTTTCATTGTACTTAAGAAG CATTTTTATattgggggggctgaagtttagtgacaccaccatggtttggc ccgaggggaaaaattttgaaaatttgagctctagattgcttgaaaatgca ctcaaaataaaatattttcgagaaaaaacaacataaaaatcaatcttTAA CATAAGATGTGTTTTAAAAGATATTATTAGCCCCCCTTGcacccccagtt gctacggcactgattAAGAAACGAGGAAGGACCTTTATTCCTTAGTCACC TGAGAGTAGCTATCAGCTAATCAAATTTCTTATCAAAAGATACTATGTAA GAAGTACTTTAAGAACATCACTTCGTTGTTTCTTACCACAGGACAAGTTG TGAAAGGTGGTTTAGGAAAACATCCACGTTTCATTATCATCATGACACTC ATCTTCATCCAAGCTCTCATCCTCATCATCGTCAACAACCTGTACCCACC GCAAACAATGCACAGCGCCACCGATAATTACGCCGTAAAATACGCCGAAT GTTCCAGCTGGGCTTCCTGGGGATTCTGGGTAGCTTTCTCCTTCAACATT GCTTTATCGTTGATCGGTAACTTCATGTCGTGCTCTTCCACCAAGATGGA GGACATCTGTGAAGAACTTAAATGGTTGCTTATCACTTATTTGATCTTCT ACATGAATGGTTTAGCTGAAGTTATCATCTTCTACCGTGTCCGAAACGAG CAATTAGCTGTCGGACAAGCAGTCATGTGCATTCTCATGGCCAtgtcttt ctattttttcttcatCTGGCCCAAAGTATGGTACGTTTTGTTCAAATCTA AAGATGGGAAGATTCAGCGATCACCAGAACCCATTCCCCAAGACGACGAT CACATGACTACAGCCATCCATAGTTCAGACGCTTTCAAACAACATGGCGT TGTGCAGATGAGATTGAAACAAAATGACGCTGAAGCCTAAATAGAACGGA TGGTGAACGAATAAATAATGTTCCTTGCTGGACATACTGAGTGCTTTCTA ATGACGAAGCTCATAGATTGATGTTCAGAAGAATGACGAGGTCAGTTTAG GTCAAAGAAGACCACCACGTGAGAGAACATTAAACAAACAAGTAAACAAA TGAACATACCTAACAATTACCGTCCAAACAACATCTTTTGGATTGTCTTT TAACGTTAATGTCTGAGTAATGTGTTCTTTTAGCTTtaactgaaataaaa aattaatgttgagttttttagtgatttgaCCAGAGGGGGATTTCATGAAA AGATCCAAGGCAGTCCAAAGATTACAGTGTCAGAATATCTTTTCCATGAA GAATTGCCAGGTCAAGCTAATAcaagaaaaattcttaaaaaccaTTCTAG AAAGACAATTCAAAAATAGTATGACGAAAGGAAAAAACTTTTAGGACATT TATACAAAAGATGAACAtattatacatatttttttccCAACAGAAATGAA AGTTTGTTCCAAAAGCTATGATCGCATTAATTTATAACCCTGTGTTTCAA ATTTCTCAACATGACAAAGCTTTTCGAACAGACTTTAAAAGAATTTAAGA gaatttttgtaatattttttacattataataattataattttatttacaa GATGTATAGTCCTTTTTATAGATAATGACTGTAACACTTTTAAACTCTCT CCTAATGTGCTTACGCGTTTAAACATTtagttttcaaactttttgtgaTT TC

Coding sequence (CDS) from alignment at sc0000201:315835..320886+

>TCONS_00014938 ID=TCONS_00014938|Name=TCONS_00014938|organism=Clytia hemisphaerica|type=CDS|length=5202bp|location=Sequence derived from alignment at sc0000201:315835..320886+ (Clytia hemisphaerica)
ATGAGGATATGTCcgattatatcattttttccACTCAAGACTGGAGCAAA
GAAGGGGATTCCCTGGTACCATACAGCGACNgattatatcattttttccA
CTCAAGACTGGAGCAAAGAAGGGGATTCCCTGGCACCATACAGCGACGTT
ACTCAAGGAATGATCTACATTCACCCAGACAGGGATACCCTCAATTTTGA
GGGTCGCATTGGAAGTGTGACCAGACCTTACACCAATTCACCATGGTTGA
AAGCTTTATATGACAGTTATGGCGGCAACACACAAGCTGAGGATAAGGTC
AAAAGTGAAGTCTCCAAAGCCTCGTCGTCAGCCATTTACAGTTATGAATC
CATCTACACTATTGCTGAAGGATTACTCAAAGGACGTGATTTGTTAGAGA
AAGTCAAAGGTCTTGAACTAGTCATCGAATATCTTGGACGAAATGATTTG
AGATTCAATGATCACTTGATCGCTGAGGGTACAAGGTACGTCTTGAAGAA
TGTCAAGAAATCATCTTCACAAGGTGTTTTTGTTGGATCATGGGAGAACC
AACCGAACAGAGAACCATTGAGGTTGAGCAAACAAAACATCGAGTGGAAG
AACGGTAGCAAAGAAACACCAGTCTCATCGTGCAGTGAGACATGTGCATT
GGGTTTTTACCGAGAATTCACAAATGATGTCATCAAATGTTGTTGGGATT
GTAAAGCTTGTCCGAACGGCACCTTCAGCAACATCACCAACTCGAACACT
TGTTTGACACCATGTGAAGGTTGTGTTGCAAAGCCAGACAAAACAGGATA
CGTCAAGTAcgaagttcaaaatttcaaatggtTTGGTCCAAAAGGCTCCT
TCTTAATCTTCTTGATCGTCCTCGCCTCTTGCTTCATCTTGCTGGCTCTT
GGTATCATCAGCCAAAACTCTGATCACGAACTCATCCAATTATCTGGCTA
CAATCTTCTGTGCTTGTATCTGATTGGTTGTTTATTGTTAACCCTTGCAC
CAATCCCATTGCTTGTTACACCGACAGTGAGTTCGTGTAATGGTTACATC
GCAGTCATGAACATCGGGTTGACGGTCATTTTTGCAGTGATGATGACGCG
AACAAGTTACGTCAACGACTTCTATGATGAAAACGGACAAGTTGTGAAAG
GTGGTTTAGGAAAACATCCACGTTTCATTATCATCATGACACTCATCTTC
ATCCAAGCTCTCATCCTCATCATCGTCAACAACCTGTACCCACCGCAAAC
AATGCACAGCGCCACCGATAATTACGCCGTAAAATACGCCGAATGTTCCA
GCTGGGCTTCCTGGGGATTCTGGGTAGCTTTCTCCTTCAACATTGCTTTA
TCGTTGATCGGTAACTTCATGTCGTGCTCTTCCACCAAGATGGAGGACAT
CTGTGAAGAACTTAAATGGTTGCTTATCACTTATTTGATCTTCTACATGA
ATGGTTTAGCTGAAGTTATCATCTTCTACCGTGTCCGAAACGAGCAATTA
GCTGTCGGACAAGCAGTCATGTGCATTCTCATGGCCAtgtctttctattt
tttcttcatCTGGCCCAAAGTATGGTACGTTTTGTTCAAATCTAAAGATG
GGAAGATTCAGCGATCACCAGAACCCATTCCCCAAGACGACGATCACATG
ACTACAGCCATCCATAGTTCAGACGCTTTCAAACAACATGGCGTTGTGCA
GATGAGATTGAAACAAAATGACGCTGAAGCCTAAATGAGGATATGTCcga
ttatatcattttttccACTCAAGACTGGAGCAAAGAAGGGGATTCCCTGG
TACCATACAGCGACNgattatatcattttttccACTCAAGACTGGAGCAA
AGAAGGGGATTCCCTGGCACCATACAGCGACGTTACTCAAGGAATGATCT
ACATTCACCCAGACAGGGATACCCTCAATTTTGAGGGTCGCATTGGAAGT
GTGACCAGACCTTACACCAATTCACCATGGTTGAAAGCTTTATATGACAG
TTATGGCGGCAACACACAAGCTGAGGATAAGGTCAAAAGTGAAGTCTCCA
AAGCCTCGTCGTCAGCCATTTACAGTTATGAATCCATCTACACTATTGCT
GAAGGATTACTCAAAGGACGTGATTTGTTAGAGAAAGTCAAAGGTCTTGA
ACTAGTCATCGAATATCTTGGACGAAATGATTTGAGATTCAATGATCACT
TGATCGCTGAGGGTACAAGGTACGTCTTGAAGAATGTCAAGAAATCATCT
TCACAAGGTGTTTTTGTTGGATCATGGGAGAACCAACCGAACAGAGAACC
ATTGAGGTTGAGCAAACAAAACATCGAGTGGAAGAACGGTAGCAAAGAAA
CACCAGTCTCATCGTGCAGTGAGACATGTGCATTGGGTTTTTACCGAGAA
TTCACAAATGATGTCATCAAATGTTGTTGGGATTGTAAAGCTTGTCCGAA
CGGCACCTTCAGCAACATCACCAACTCGAACACTTGTTTGACACCATGTG
AAGGTTGTGTTGCAAAGCCAGACAAAACAGGATACGTCAAGTAcgaagtt
caaaatttcaaatggtTTGGTCCAAAAGGCTCCTTCTTAATCTTCTTGAT
CGTCCTCGCCTCTTGCTTCATCTTGCTGGCTCTTGGTATCATCAGCCAAA
ACTCTGATCACGAACTCATCCAATTATCTGGCTACAATCTTCTGTGCTTG
TATCTGATTGGTTGTTTATTGTTAACCCTTGCACCAATCCCATTGCTTGT
TACACCGACAGTGAGTTCGTGTAATGGTTACATCGCAGTCATGAACATCG
GGTTGACGGTCATTTTTGCAGTGATGATGACGCGAACAAGTTACGTCAAC
GACTTCTATGATGAAAACGGACAAGTTGTGAAAGGTGGTTTAGGAAAACA
TCCACGTTTCATTATCATCATGACACTCATCTTCATCCAAGCTCTCATCC
TCATCATCGTCAACAACCTGTACCCACCGCAAACAATGCACAGCGCCACC
GATAATTACGCCGTAAAATACGCCGAATGTTCCAGCTGGGCTTCCTGGGG
ATTCTGGGTAGCTTTCTCCTTCAACATTGCTTTATCGTTGATCGGTAACT
TCATGTCGTGCTCTTCCACCAAGATGGAGGACATCTGTGAAGAACTTAAA
TGGTTGCTTATCACTTATTTGATCTTCTACATGAATGGTTTAGCTGAAGT
TATCATCTTCTACCGTGTCCGAAACGAGCAATTAGCTGTCGGACAAGCAG
TCATGTGCATTCTCATGGCCAtgtctttctattttttcttcatCTGGCCC
AAAGTATGGTACGTTTTGTTCAAATCTAAAGATGGGAAGATTCAGCGATC
ACCAGAACCCATTCCCCAAGACGACGATCACATGACTACAGCCATCCATA
GTTCAGACGCTTTCAAACAACATGGCGTTGTGCAGATGAGATTGAAACAA
AATGACGCTGAAGCCTAAATGAGGATATGTCcgattatatcattttttcc
ACTCAAGACTGGAGCAAAGAAGGGGATTCCCTGGTACCATACAGCGACNg
attatatcattttttccACTCAAGACTGGAGCAAAGAAGGGGATTCCCTG
GCACCATACAGCGACGTTACTCAAGGAATGATCTACATTCACCCAGACAG
GGATACCCTCAATTTTGAGGGTCGCATTGGAAGTGTGACCAGACCTTACA
CCAATTCACCATGGTTGAAAGCTTTATATGACAGTTATGGCGGCAACACA
CAAGCTGAGGATAAGGTCAAAAGTGAAGTCTCCAAAGCCTCGTCGTCAGC
CATTTACAGTTATGAATCCATCTACACTATTGCTGAAGGATTACTCAAAG
GACGTGATTTGTTAGAGAAAGTCAAAGGTCTTGAACTAGTCATCGAATAT
CTTGGACGAAATGATTTGAGATTCAATGATCACTTGATCGCTGAGGGTAC
AAGGTACGTCTTGAAGAATGTCAAGAAATCATCTTCACAAGGTGTTTTTG
TTGGATCATGGGAGAACCAACCGAACAGAGAACCATTGAGGTTGAGCAAA
CAAAACATCGAGTGGAAGAACGGTAGCAAAGAAACACCAGTCTCATCGTG
CAGTGAGACATGTGCATTGGGTTTTTACCGAGAATTCACAAATGATGTCA
TCAAATGTTGTTGGGATTGTAAAGCTTGTCCGAACGGCACCTTCAGCAAC
ATCACCAACTCGAACACTTGTTTGACACCATGTGAAGGTTGTGTTGCAAA
GCCAGACAAAACAGGATACGTCAAGTAcgaagttcaaaatttcaaatggt
TTGGTCCAAAAGGCTCCTTCTTAATCTTCTTGATCGTCCTCGCCTCTTGC
TTCATCTTGCTGGCTCTTGGTATCATCAGCCAAAACTCTGATCACGAACT
CATCCAATTATCTGGCTACAATCTTCTGTGCTTGTATCTGATTGGTTGTT
TATTGTTAACCCTTGCACCAATCCCATTGCTTGTTACACCGACAGTGAGT
TCGTGTAATGGTTACATCGCAGTCATGAACATCGGGTTGACGGTCATTTT
TGCAGTGATGATGACGCGAACAAGTTACGTCAACGACTTCTATGATGAAA
ACGGACAAGTTGTGAAAGGTGGTTTAGGAAAACATCCACGTTTCATTATC
ATCATGACACTCATCTTCATCCAAGCTCTCATCCTCATCATCGTCAACAA
CCTGTACCCACCGCAAACAATGCACAGCGCCACCGATAATTACGCCGTAA
AATACGCCGAATGTTCCAGCTGGGCTTCCTGGGGATTCTGGGTAGCTTTC
TCCTTCAACATTGCTTTATCGTTGATCGGTAACTTCATGTCGTGCTCTTC
CACCAAGATGGAGGACATCTGTGAAGAACTTAAATGGTTGCTTATCACTT
ATTTGATCTTCTACATGAATGGTTTAGCTGAAGTTATCATCTTCTACCGT
GTCCGAAACGAGCAATTAGCTGTCGGACAAGCAGTCATGTGCATTCTCAT
GGCCAtgtctttctattttttcttcatCTGGCCCAAAGTATGGTACGTTT
TGTTCAAATCTAAAGATGGGAAGATTCAGCGATCACCAGAACCCATTCCC
CAAGACGACGATCACATGACTACAGCCATCCATAGTTCAGACGCTTTCAA
ACAACATGGCGTTGTGCAGATGAGATTGAAACAAAATGACGCTGAAGCCT
AA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008353XLOC_008353Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014938-proteinTCONS_00014938-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014938-exon-sc0000201-1491911889:315835..316201TCONS_00014938-exon-sc0000201-1491911889:315835..316201Clytia hemisphaericaexon
TCONS_00014938-exon-sc0000201-1510915933:315835..316201TCONS_00014938-exon-sc0000201-1510915933:315835..316201Clytia hemisphaericaexon
TCONS_00014938-exon-sc0000201-1575043694:315835..316201TCONS_00014938-exon-sc0000201-1575043694:315835..316201Clytia hemisphaericaexon
TCONS_00014938-exon-sc0000201-1491911889:316628..316920TCONS_00014938-exon-sc0000201-1491911889:316628..316920Clytia hemisphaericaexon
TCONS_00014938-exon-sc0000201-1510915933:316628..316920TCONS_00014938-exon-sc0000201-1510915933:316628..316920Clytia hemisphaericaexon
TCONS_00014938-exon-sc0000201-1575043694:316628..316920TCONS_00014938-exon-sc0000201-1575043694:316628..316920Clytia hemisphaericaexon
TCONS_00014938-exon-sc0000201-1491911889:317249..318393TCONS_00014938-exon-sc0000201-1491911889:317249..318393Clytia hemisphaericaexon
TCONS_00014938-exon-sc0000201-1510915933:317249..318393TCONS_00014938-exon-sc0000201-1510915933:317249..318393Clytia hemisphaericaexon
TCONS_00014938-exon-sc0000201-1575043694:317249..318393TCONS_00014938-exon-sc0000201-1575043694:317249..318393Clytia hemisphaericaexon
TCONS_00014938-exon-sc0000201-1491911889:318671..319009TCONS_00014938-exon-sc0000201-1491911889:318671..319009Clytia hemisphaericaexon
TCONS_00014938-exon-sc0000201-1510915933:318671..319009TCONS_00014938-exon-sc0000201-1510915933:318671..319009Clytia hemisphaericaexon
TCONS_00014938-exon-sc0000201-1575043694:318671..319009TCONS_00014938-exon-sc0000201-1575043694:318671..319009Clytia hemisphaericaexon
TCONS_00014938-exon-sc0000201-1491911889:319526..320886TCONS_00014938-exon-sc0000201-1491911889:319526..320886Clytia hemisphaericaexon
TCONS_00014938-exon-sc0000201-1510915933:319526..320886TCONS_00014938-exon-sc0000201-1510915933:319526..320886Clytia hemisphaericaexon
TCONS_00014938-exon-sc0000201-1575043694:319526..320886TCONS_00014938-exon-sc0000201-1575043694:319526..320886Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000201supercontigsc0000201:315835..320886 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.247569 0.241419 0.134062 0.143082 0.174188 0.114705 0.152225 0.207289 0.217692 0.112353 0.152674 0.222229 30.5964 34.2874 6.25266 8.75654 351.392 440.793 58.344 52.815 213.336 213.202 53.6985 65.5493 100.89 83.4409 2.19915 1.03961 0.0836295 0.0973774
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR017978GPCR_3_C
IPR011500GPCR_3_9-Cys_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014938 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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