TCONS_00014830 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014830
Unique NameTCONS_00014830
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length374

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014830 ID=TCONS_00014830|Name=TCONS_00014830|organism=Clytia hemisphaerica|type=transcript|length=374bp
ATCACGATAAATAGAAGATTCAAGTTTAGCTTTACTTAGGATATTTTTTT
TGTATCCAGTCACAAAGTATGATTTGTACGTTGTATAGTCATACTTTCGG
CTATGGTTGTTGAATTTAGTGGTATCGCCCCATGTAAAACGAATCGCATT
TCTTCGATCTCCATGCTCGATATGTGATGTTACCATTATCAAAATATCAC
CATGGAAAGGCTCAATATCTTTAGGATTCAATAATCTAATATTTGGTTTC
CTGTTTGGGTTGGGTTAAACAATTCGGTGCACTTTCATAAAATCCGTTTG
TAATTCATcgaattttgattgaaaagcaTCAAGTTTGGTAGCTAATGTTT
CTGAACGGCTTCTCTCTGTATAGA
Run BLAST on NCBI

transcript from alignment at sc0000198:291617..291990

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014830 ID=TCONS_00014830|Name=TCONS_00014830|organism=Clytia hemisphaerica|type=transcript|length=374bp|location=Sequence derived from alignment at sc0000198:291617..291990 (Clytia hemisphaerica)
TCTATACAGAGAGAAGCCGTTCAGAAACATTAGCTACCAAACTTGAtgct
tttcaatcaaaattcgATGAATTACAAACGGATTTTATGAAAGTGCACCG
AATTGTTTAACCCAACCCAAACAGGAAACCAAATATTAGATTATTGAATC
CTAAAGATATTGAGCCTTTCCATGGTGATATTTTGATAATGGTAACATCA
CATATCGAGCATGGAGATCGAAGAAATGCGATTCGTTTTACATGGGGCGA
TACCACTAAATTCAACAACCATAGCCGAAAGTATGACTATACAACGTACA
AATCATACTTTGTGACTGGATACAAAAAAAATATCCTAAGTAAAGCTAAA
CTTGAATCTTCTATTTATCGTGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008300XLOC_008300Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014830-exon-sc0000198-1491911889:291617..291990TCONS_00014830-exon-sc0000198-1491911889:291617..291990Clytia hemisphaericaexon
TCONS_00014830-exon-sc0000198-1510915933:291617..291990TCONS_00014830-exon-sc0000198-1510915933:291617..291990Clytia hemisphaericaexon
TCONS_00014830-exon-sc0000198-1575043694:291617..291990TCONS_00014830-exon-sc0000198-1575043694:291617..291990Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000198supercontigsc0000198:291617..291990 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.430033	0.41935	0	0	2.60966	2.74958	2.48794	2.32918	2.17428	1.57103	1.96057	1.5752	8.86605	5.49479	5.49421	3.1446	16.7869	13.8972	5.02848	6.69702	4.57359	4.25887	1.4792	1.56895	0	0.824126	3.8328	1.2586	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014830 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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