XLOC_027392 (gene) - C. hemisphaerica

Overview
NameXLOC_027392
Unique NameXLOC_027392
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0004495:2182..5924-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_027392 ID=XLOC_027392|Name=XLOC_027392|organism=Clytia hemisphaerica|type=gene|length=3743bp|location=Sequence derived from alignment at sc0004495:2182..5924- (Clytia hemisphaerica)
TAAGATGTCATTCTAACAGAGTAGTCAAAATGTACTTGACATACTTGTTC
TTTCTGAGTAGATTAGCATTAGCGTTGACTCAATGGTATGAACCATCCGC
AAAAGAAGTCGTCATTTCACAACAACAACAACAACAACGACAACATTCAT
CAAATGAAGCTTTTTCTGCAAGGTCAACCATCGAATGCACCTTGAAATGT
CAATTGACAGCAACAATACTTGAAATCGAAAGTGTTTTCGTAGAGAAAGA
TCAGAAATGTTTTTGTTTATCCCCTGGGGATAATGAGATCGAAGCAAGCA
CCGATGATGGTGTCGTAGCCCACTCAACGCCACACAAAGTAATTTACTTT
TCTTTGAAAATATAGTGATCTGAATTATCTTTTCAACGGCATAATGTGCA
AAAATTGGAGTAGTCGTTGAAAAATGACATACAAAGCAAACATTAGAGTG
CACACTCACAGCGGTTTTTCCCAAGAGTTTGACGGAGCGATGTCTAAAAT
TGAATAGAATTTGCGAGGATCTAAATTTATTTTCCAGGGAGTTAAAAGTT
ATTTTAGACGTACAATCTTTCGCGAGGTCGGAATATCATGAAATTTACGA
CATTTACTTTCGCGAATTTGACGGAAAAAACTTTCTTGCGAGCACAAACT
TTCGCGAATCAAAACAGACGAAAGAATGGCTTAGAGGGACAAATACTTGA
ATTGGATTGAAACTTCTGCTTTTTGACTTGACGCTTTGACAGGCTAAAAA
GTACCATAAATCTTACATTTTATTACAGATTTTTTATTTTGTTAAAAATT
ATTCACGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNGACATAGAAGATGAAAAATGAA
TACGCATAGTTTAAGTTTTAACTTACATAATTGATTAATAACTAAATTAA
CTGTAATATTTGAACAATAATATATTACTTGCCCCATGTATGTATCACAA
GGTCATCATTTATTTATTTGCGGCGGATATATAAATTGATATTTCTTCTA
AAAAGACTGATGAATAGGTCACGAAAACAGAAGAACAAGTGCCGATAGAT
GGATAAGATGTCAGTCTAACAGAGTAATCAAAATGTACTTGACATACTTG
TTCTTTCTGAGTAGATTAGCATTAGCGTTGACTCAATGGTACGAACCATC
CGCAAAAGAAGTCGTCATTTCACAACAACAACAACAACAACAACATTCAT
CAAATGAAGCTTTTTCTGCAAGGTCAACCATCGAATGTACCTTGAAATGT
CAATTGACAGCAACAATACTTGAAATCGAAAGTGTTTACGTAGAGAAAAA
TCAGAAATGTTTTTGTTTATCCCCTGGGGATAATGAGATCGAAGCAAGCA
CCGATGATGGTGTCGTAGCCCACTCAACGCCACACAAAGTAATTTACTTT
TCTTTGAAAATATAGTGCTCTGAATTATCTTTTCAACGGCATAATGTGCA
AAAATTGAAGCAATCGTTGAAAAATGACATACAAAACAAAGATTAGAGTG
CACACTCACAGCGGTTTTTCCCAAGGATTTGACGGAGCGATGTCTACTTA
TGATTTCTTTTTCCAGGGGTGCAATGAAAAGTTCTTTCATTATCGAAGGG
GTCAAAGAAAATTGAAGAATGGAATTTGCAGGGATCTAAATTTATTTTCC
AGGAAGTAAAAAGTTATTTTAGACGTACAATCTTTCGCGAGGTCGGAATA
TCGTGAAATTTACGACATTTACTTTCGCGAATTTGACGAAAAAATATGTT
TCGAAGAAACGAACAAACTTTCGCGAATCAAAACAGACAAAAAATGGCTT
AGAGGGACAAATACTTCTTGATTGGAAAAAATGAAATATTTATAGATTTA
AGGCTAAGAATCACAAAAGAATTAAGAACAGCAGCAGTTGTGAAGTTGTT
TGGAGGGCGTTGTAATCTGTTAGATTACCTTTGCCCATGAGCAAAAGCTA
TCTGTTTCCCATAAAAAAAGTGTCCAGCAGAATAATAAGGAGTAATCTTC
CTTTCTTATAGCTTTGTCCAAAGAAATCATGCAAAGAAGTAAAAAAGGTT
TGTCCGAAATGTGGGTCAGGGTTTTACACCATAGAATTTGATGAACCAAC
AAAAGTTTACTGTGACATGACCACAGAACAAGGTAAGAAAAAGAAATGAT
TTCAATATAAATACAACAGACAGAAAGATACATGAACCCCCCAGAGATTT
TTGTGGTGGCGTTTTTAATGTTCGTGATTTAAGATATTAAAATGCGTGAT
TGCGTGATCGGAGGAATTAACGTGATCGTGGTAGAAAGGAAATTTAGCTC
GTGATTGCTTGATTTGAAAGGTGACTGGGGGGCCTCATATACAGTCAGGC
ATACAAACAACAAAACTGGAAATAAATAAAAAACTTACATAAAAAACATG
TATGTATTTTGGAAGATACCATAAAAAAGGTGAAAGTAAAAAAAAGATCT
GATCTGCCATCTGACTCCATTAAGATAGACAGATAGACAGACAGATAAAC
AGTGTGAGATTTTCTTTCAAAATGATAGATCAAACTAACAAAAATGAACA
CTAATTTGATAATAAATGGATATAAAAAAAATTCAATCTTGTTATTTATT
TTCATTCTGTAGGCGGATGGTTGATGGTTGGCAATGTCACAGTCACATCA
TCTCCTTTCTCTACTTCCAACCTTCAACAAAACACTCTTTCCGATCTCCA
TAATGTACAAGGTGGTGAATTCTTATTGAAGGTGGCGCTCCTCACAGACC
TTCAGACGTACACAGGCTTCACTGAAGTGCGCGTCATGTGTTACAAAACT
GGCCACAAAAGAAAAGTACATGCTATCGTTTACGGAGAGCAAGTCATGCA
GATGATTGTTGGAGTGAGTTATTTCCATGGCTACTGCCAACAGATCCGTT
TTTTAAGCGATGACACGTCTTCATTACGTCAGAATTACGGTTGTAGTGAC
CTCAGAGGTGGTTATTGGAATGAGAAGTCCTTGTACGAGAGAGTGATTTG
GGTTTATAGCGGTCCCTTGGTGTGGTTGACGTCCGATGGTGCGCGCGCTG
AGTGCGACGATATTTCGTACTTAGGCGGTTTCAGCAAATACGGTCAATTT
CAATTTTATGTGCGTTGAACGAAACAGATCTTATCGGAGTTTTTGGCTTT
TCTAAAAAAGCGATGCATTGCGGTATTGTTTCGGGAGTATTGCAATAGAA
TTCCCTCGACGCAAGAACAATAATCAAAACATTTTTAATGAAACTCTCCG
AAACAATTTGACAGATTTAGACAATTTAGGAATTCTTTTAGGAAAGACCT
CTGACAAGGTCGCAAAACTCGAGTAATGAACTTCCTCCCAAGAAATTCCA
CATTGTAATCTCACTCACCGAGACTTTATTAAATAATTTTAGGTTAGTAT
TGTTGTATTTGTTGATTGTTATTTGTTAAATAACGTAGAAATTAAAAAAA
AACACCAATTTTCCAGTTTTCTGAACACTGCACCAATATTTAAAACTATT
TTAAATTGTAAATTGAATGTAGTTTTTCGGTATATAAGACAAAAATGGTA
TTAACTTTCAATGTCTGCTTCTTGTCTCGTATTTTCGTTTTATTTTTTTT
CTTCCGCAGAGACAGAGTTTGTTATCTCAAATAACTAAACTTTTAATGGA
TGCAGTATCTTTAAGTTAAGACAACCGAGTTTTGTTTTGTTTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00043709TCONS_00043709Clytia hemisphaericatranscript
TCONS_00043708TCONS_00043708Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00043709-proteinTCONS_00043709-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004495supercontigsc0004495:2182..5924 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.08	0.18	0.06	0	0.07	0.11	0.21	0.06	0.04	0.08	0.1	0.26	16.07	10.43	0.75	0.52	0.22	0.25	21.96	18.07	0.31	0.34	0.03	0.08	0.2	0.54	0.07	0	0.03	0.06