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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014734 ID=TCONS_00014734|Name=TCONS_00014734|organism=Clytia hemisphaerica|type=transcript|length=544bp
GGCTTTTTAAATATGGAAGACAACAGAATGGTTGTCTCGATGTATTTTCC
GTTCAAGGCAAAATGTCAATGAGTTTACAGAAAATAGTCGAGACAAAAAA
ATCATATGAGCTTCAGTAGGCCAGGGGGAAGCTGAGTAGCTGAGTCGGCG
ATTTGGAAACCaaaaccaaaagaaaattattttcactgTGAACACAGAAT
ACTATGgATAATATGGATGACCAAAATTTACTTGATGAACAAAAGGAAAG
AAGTACTTCTGTTGATTTAAATCAAGACAACTCTCTTTTGGTTGACATTT
CTGATGCATTGAGTGAAcgagaaaaagtcaaatttaCTGTCCACACAAAG
ACTGAACTAAAGGAATTTCAAGGAACAGAATTCTCAGTTATCCGTGATCA
TGAAGAATTTATTTGGTTACATGATCGATTTGTAGAAACTGAAGATTATG
CNcgtatctacatatctacgcatccatgtatctatgtatctacatatcta
cgcatccatgtatctatgtatctatatatctacatatccatgta Run BLAST on NCBI protein sequence of TCONS_00014734-protein >TCONS_00014734-protein ID=TCONS_00014734-protein|Name=TCONS_00014734-protein|organism=Clytia hemisphaerica|type=polypeptide|length=113bp
MDNMDDQNLLDEQKERSTSVDLNQDNSLLVDISDALSEREKVKFTVHTKT
ELKEFQGTEFSVIRDHEEFIWLHDRFVETEDYXRIYISTHPCIYVSTYLR
IHVSMYLYIYISM Run BLAST on NCBI transcript from alignment at sc0000197:344108..351906- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014734 ID=TCONS_00014734|Name=TCONS_00014734|organism=Clytia hemisphaerica|type=transcript|length=7799bp|location=Sequence derived from alignment at sc0000197:344108..351906- (Clytia hemisphaerica)
GGCTTTTTAAATATGGAAGACAACAGAATGGTTGTCTCGATGTATTTTCC
GTTCAAGGCAAAATGTCAATGAGTTTACAGAAAATAGTCGAGACAAAAAA
ATCATATGAGCTTCAGTAGGCCAGGGGGAAGCTGAGTAGCTGAGTCGGCG
ATTTGGAAACCAAAACCAAAAGAAAATTATTTTCACTGTGAACACAGAAT
ACTATGGTAAGATTTTGTGGGAGGGTTAGAAGGGTCCATTAATATATTTT
CTTGTTTGCTTCAGAAGATTTTTTTTCATTCACAACACTTGACTCATTTA
GGCACTAGCTTTCATAAAATATTGCAAAAAACATTAGGGAGGCTACCAGG
CAAGACTCTGTACTACTACTACTACTACTAAATCTTTGTACCATTTCTAA
GTTTCCCCCAACTTACCTTCCCTTAAAAATGAAGAAGAAATTAGCCGCAT
CATGGAGGATGAAGTGCATGAGGTCACCTGCGGGGCAAATTACATGCTTG
TAAATTTGGTGGGCGGTTTGGTGTGGTGATGATATGATATGATATGATAT
GATATGATATGATATGATTTCTTTTCTAATAAGTTTCCGAAATATGTCTA
TGTACACAAGTCAGCCCTTTTGGGCTTTGGTTCTATGTACATTTAAAAAT
AGAATATCTAAAAAAAATATCACCTTAGCGGTGATACAACAAAGGGTAAT
GGTTGTTCCTAAAAGCTAAATAGTTAAAATAAATATAATGGGTTCTAAAT
CGTAAGTACTAAACCCCAAAACAGACCGGAAACCAGTGGAAACGAACGCA
AACGGGCGGAAACGAGCGGCGAAAACGGGCGGAAACGAGTGGCGAAACGG
GCGGAAACGAGTGGCGAAACGGGCGGAAACGAACGAAAAACAACTGGAAA
CACATGAAAACGAGTGGAAATGAGTGCTAGGGGTTCATATCAGGTTTGGC
GGTGGGCGGTTTCTATCAATCAGGCAGTATAGACCTAACTCTTCATACAA
AAATTACGGGAAACGCATATTTGGACTTTGTACCCTATGCTGCACTCAAG
CACTTGAGCCAAAATCCCGCAAAGGCNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCTAGGAATA
AAAATAAAGGGATAATGATAATTGAATACTATCCATTGATGATCCGCGGC
ACTATCGTAAAGCTAGAATCACTTCGCGTACACTTCGCGTACACTTCGCT
TGAGAGAATGATTGACAGATTGAAGTTTTTCATCCCGCGGCGCGCGCCGC
GCGGGAGCTCGGGTGCTATGCGAGAGTTCTCGGCTCAATCCTCGGACCAC
GCTAAAAATGGTAAACTGAGCTGTGATAGATCATTTCGATGGAAGTTGTT
GGAATGTTTACAAGGCTCTTGACAGAAAATCGTTTGTTTTATTGTCATAA
TGATGACAGTGTGGTTATTAATTTTGTTAGATCTGACAAATTGATGTTTG
TAAGTGCACTTTATAGTTTTGATTCCCATTGAAGAATCATATTCTGGTTT
TCATGTTATTAGATGCTGTTTTAGAGCTTTAGGTCTACACTGTCAGGGTC
AGCTATTTTTAATAAACAAAAACAATTTTATAAATCAGTTTTTAAAACAC
CCCACTGATATTCTCTGCTGTACTTGATATGCTACATGCTTTTAAACTTT
TAATGGCTTGACAATATGATAGGGTGTATACCGTGAGATTGGGTAACTTG
CATCAGTGGAGGCTGACACGACCCTCGACATGGCCCGAGAATTCTCGGGC
CAAAACTTTTATTGGAATGCGCATAAAGCCCGAGGATGGCCCGAGGATGG
CCCGAGTTTTCGGNACTTTTATTGGAATGCGCATAAATCCCGAGGATGGC
CCGAGCATGGGCCGCGGGCGGGCCTCATGCAGGCCACACGCGGGCTAACT
TTTGAAATCATGATTTAAACCCACGTGTAATTTCAGGACTGCATTTTTTC
AATATTTTCTCTAGAAAAACTTGATTTCACTTAAATATTTGCTATTAAAC
TGGTCCTGGTTTTAAACTTTAAGCGTGGTCCACGAGGAGTTTGTTAAGTT
TATTTAGCAAGATGAACTGGATGAAACGCGACAAAATAAATTAAAATTAA
CATTTTCACACATTTTCAACGTCATTTTCACGTTTTAATTTTATTATGAC
TCTGACTGGACAAGCTGGGATTAATCAATAGAATCTTCTGACACAGGCAC
AAAGGTATAGCTTGAACAGTTTACGTCTTAAGTCGTAGCCCGAACGTGGC
CCGAATGATTCGGGTCAAGTTCGGGCCAAAAGAATTGATAGGGTCTCTCA
GCCCGAACATGGCCCGAAGAGGCCCGAGAATTCTCGAGCCATGTCGAGGG
TCGTAGGCTGACATGCATAGCCCTAAAATGAAAGACCTGGCTGGTCATTA
AAATACAAAATTAAATCATAACAAAAATGGTAGAGTAGAGCTGCGAGCAG
AGCTGCATAGCACAAGTGTTTCAACTGGTATTCCAACAAAGCCATATATG
GTTTGTACAGAAATTTTGCCCGCTCAAAGCCAAAACAACAAAATGGTCAA
TCTCACTAAAGCAAAACATTGCGGCCACAGCATTTCCCTGGATATAAATT
CTGGTCACGTGACCATCCATGATTTTAGACCAATGAAAACGCTTCATTTC
CCCGGATTAAAGGAAATGGCTAGAAAAAGAGAGAAAAAACCGGTGGTCAA
ATTAAATTTTTCTCCCTTCTTGTGGCAAACATGAAAGACTTTAAGAGGCC
ATTTATTTAAGAAAGGGGTGTTATATCATAAATAAATTATGTAAAGTAAG
TGATATTTTAAGTAACAAGTTCATCAAAAATTTTATTTTGAAGTTTGTTT
TTAAAAACAAAACCCCCGTGCTAGATGATAATCTCATTTTCTTAACTTAT
GGACCATTTGGAAGTCTTTGTAATACAGATCATTTGACAGTGTAGTTGCA
GCCTATACAAGAATTGGAATCTAAAGTCTGAGGTCGTAGCTCCTTGCCAG
TGACCCCGAAGAGAAATTTTTAGTTGGACATTGACACTGACTTTTTAGGT
TAGTTTGGAAATTGTTTTATTTTGAAATGTAATCTTCACTTTAGATGAAT
ACTTTTATTTATTTGGATTCATGAAAGGTTCAAGGTTTGTTTACTTTTAA
TTTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATAGTTATCAGCGTGGGC
TTGGCCGCCATTTTGAATTTCGATTTTTTTTCTCCTGTACTCAGCAATTT
AGAGGTTGTTCGTAATACGCGATTTGGCTTAGGCATAACACTTGTGGTAG
TTGTATTTTGATGACCAGCCAGGTCTTTCATTTGAGGGCTATGAATGTTA
GCCTCCACTGATGCAAGTTACCCAATCTCACGGTATATCTTTATCATTTT
GGTTTTCCCAGAGTATTTCCAGAATACTTTAACACCAAAAGATTTCAAGA
CTCTATTTGAAACCATTTGTGAGATTTTAGCTTAAGAAAATTAGACTTTA
TAACTCCAAATAATTGCGTTTTAGTGATAGTGGGAAATACAACTCAATTT
TTTTCAGGACCCCAGTTGAAATTGTTTTTGAGATTTTGGCCCAAAAAAAT
CAGGCCCTAGCTTGAAATGGGCTGTTCCAAAAACTATACAGAGGCCTGCA
GAGGCATGGAAGAACCTTTGCAAGTCAAAATAAAACTCTTGGAATTTTTT
TTTCATATTTTAAAGTGACAGTGAATGAACTAAAACCTGTATCTTACCCC
CTGGAAATGTTAGAATAACTTTTTTACCCCATGGAAAATGAAAAAACACT
CCTTTAGACCCTCTGGAAATTCTTCCTACTTGGTGCGCCACAAAAAAGTT
TCTTTTTAAAACTAATTTTCCCAAAATCTAAAAATTTTAAAAGAACCATT
CTAATTTCATTGGAAAAAAGAAAAATAAACTTAAATTTTGATGGGTCATT
TATTAGATTTGATAGGTCAATTTTCATCGTTTTCAAGCACTTTGTGAAAT
TAACTTTTTCATTCAATTGAGCATAACTTTAAATCTAATGAATTGAATTT
AATAAATGACCCATCAAAATTTAGGTTATTTTTCTTTTTTCCAATGAAAT
TGGAATGGTTCTTTTAAAATGTTTACGTTTCTAGAAAATTAGTTTTAAAG
AGAGAAACTTTTTTGTGCCGCACCCGGTATGTTACCCCCTGGAAATGTTT
GTCTATAAAATGGAGTGGCCCAATATTGGCATTTAGCATGAAAACTCTAT
TTCAAGGGTGCCACTAAGGATTTTTGAAAAATCAAAAAAAATTTCGTGGA
GCCCTCCCTGAAGTATTTCATTGCTGAAAATTTCAAGTGTGTACCTTGAA
GAGTTTAAAAATTTTTGCTTCTTTAAAATTAGCCTGAAATTGAAACATAG
AGTGATCTCCCTAGGGTTATTTTATTTTTTAATGTTGAATATTAGTACAC
GACACTATTTAGAAACCATTTTGACCCTTTCCTAGCCTTTCATAGTCTTA
GAATGGGCAGACAAAAGACAATGGTCTTTCTGATAATTTTTTACTCAAAC
AAAAATTACCTCATAGGGACAGTACACAATCAAAAAATGGTTAAAAGATA
AGGCACACAGGGGAGGGTTAGAGTAAAACTTTGAAGAGATTTCTTTTTCT
TTATTTGATCATGATTTTAGGACAGCTTCAACATTCAAAGGACTTTGAAT
GCATTCAGCTACAGTTTTAACCGACTTGTGATACCGATACGGCTAGTAGT
ATATAATCTGTCATTACATGCCACCTGTAGGAAAAATACTATCTTATTAC
ATTTACGCTATGATTGAAATATCAGACTTTATTGTCGACCCAAAAAAATA
TCAGCGTTTTGATTGGTCGAGAGCATCGAGATATTTGCGATATTTCATAT
TTCTCTAGTCTGGAAATATGACCGAGTTGACTTTTGGGGGACTGGGTAAG
CGGCGGGAGAAAAATCAAAACAAAACAGCCGAAAAGAACTGACTTTCGGA
GAAACTAACTTGGGAGTCAAAGGGANNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATA
AAACTACTTGAGACCACCCAAATATTTTCAGCTTTTGGTATAAAATTCGT
CCGTGTGTAACCAAACAGTTTTTTATCAATGCATACAAAAAAATTGAGAT
TCTTGAATGTTTGCTAATAAGATTTCTCATAACATAGCAAGGGAATTGGT
GATTTTTAAAAAAGTTCTCTCCTAATTCTCCTTCTCGACGAGGGGAGGTA
CGTCCTTGAATTGTAAACTCAACAATCATTTATACATCTTCCTTCTAAAA
TTCGAAACAATTAAAGCTTGACGATAATCAAGAAAGTATCCAAGTTGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTTTCAAATACAT
CTCTGAAAAATCTGCAACTCTTCAAAACAAAACTTCTGGATCGAAAATGA
TCGAAAAATGCTTCTCTGTTTTGTTTTTGTGTGAATAATTTCGGTGGGAA
CATATCGAATGTTTTATTGTTCGAATCTAACGTTCGAATTAGATTTTCGA
ATAAAAACATTCGAAACTACACAGAAGAAAGAAGCAAGGCGGAAGTAAGT
TTAAAAACAAAAACAAAAAGAAATTTATATCAGTCGACAATAAATTAGTT
ATCACATGACTTCTCGTGCAATACTCGATATTTTACTCGTTCCGAGATTT
TACCGATATTTTTCCTCGCCTAAAGGCTCGGAAAAATNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNCTCGCCTAAAGGCTCGGAAAAATAT
TACGGAAAAATCTCGGAACTCGTAAAATATTTCTCGTATTGCACTCGAAG
TCATGCGATAACTAGTACTTATTAACACTTTGCACAAAAAGCCAAAACTT
TAAGTCACCATTCTAGCGTTCAAGTCATCATTTTGGATTTTTAGGGCCTG
AAAGTTTTTCACTATTTTCTCCCAAAAAAACAAAAATAAAGGCAAAAAAT
TTCATGCTAACATCGCTTGCCTGGTTTTATGCCAGCGCTTGCGCGTGCGT
TCGCACGCCATTCATGGCCAGGCCTGTATAAACACAATTTTTTTGAATGA
TAAGAAATACCTTATAGATTGAGCGTGAACTGATATTTTCTACTTTTTAG
GATAATATGGATGACCAAAATTTACTTGATGAACAAAAGGTAAACAAAAG
GAGCATTATTAGTTTATTGGTTGAAATTAAATTCCTTCCATGAAAAATTT
TCAAATTTTTCTAAGTCTCTTCAAAAAATAAATATATTACAAATATATTG
GGCATCTATGATTGTTTTTACAGAAGTTCAAATCATCTCTACACCTTATA
TATAACTTTTTAAAGGTTGACTTTCTTGTTTTTTGTTAGGAAAGAAGTAC
TTCTGTTGATTTAAATCAAGACAACTCTCTTTTGGTTGACATTTCTGATG
CATTGAGTGAACGAGAAAAAGTCAAATTTACTGTCCACACAAAGGTAATC
ACTAATTCTTCAAATGTAATTTAAGGATCTATTTGTCTATGGGAGTGTAT
AGATCGGGTCTGTAGAATAAGAACTAGCTCAACCACTCATTCTTGACAAA
AAATAATCCGACTCAGAATAAGTCTGAAAAACTTGTAATTCACTGTTTCT
TTTTGGTTAATATCTAAAAATACCAAAAAAAGAACTTAAGCATTTTTATT
CTAAAACAAATCTGCAAAATTCACTTATCTTATCAGTATTTGCAAAAAGT
CCACTACTCAGGGCGAGACATGTTAGAAAGAGATTAACCATGCAGTTACC
TTTTTGCATTTTATTTGCAACCTGGTGCTTTTTACACAATCATTTTACAT
TCTAGACTGAACTAAAGGAATTTCAAGGAACAGAATTCTCAGTTATCCGT
GATCATGAAGAATTTATTTGGTTACATGATCGATTTGTAGAAACTGAAGA
TTATGCNCGTATCTACATATCTACGCATCCATGTATCTATGTATCTACAT
ATCTACGCATCCATGTATCTATGTATCTATATATCTACATATCCATGTA Coding sequence (CDS) from alignment at sc0000197:344108..351906- >TCONS_00014734 ID=TCONS_00014734|Name=TCONS_00014734|organism=Clytia hemisphaerica|type=CDS|length=1356bp|location=Sequence derived from alignment at sc0000197:344108..351906- (Clytia hemisphaerica)
ACTGAACTAAAGGAATTTCAAGGAACAGAATTCTCAGTTATCCGTGATCA
TGAAGAATTTATTTGGTTACATGATCGATTTGTAGAAACTGAAGATTATG
CNCGTATCTACATATCTACGCATCCATGTATCTATGTATCTACATATCTA
CGCATCCATGTATCTATGTATCTATATATCTACATATCCATGGAAAGAAG
TACTTCTGTTGATTTAAATCAAGACAACTCTCTTTTGGTTGACATTTCTG
ATGCATTGAGTGAACGAGAAAAAGTCAAATTTACTGTCCACACAAAGGAT
AATATGGATGACCAAAATTTACTTGATGAACAAAAGATGACTGAACTAAA
GGAATTTCAAGGAACAGAATTCTCAGTTATCCGTGATCATGAAGAATTTA
TTTGGTTACATGATCGATTTGTAGAAACTGAAGATTATGCNCGTATCTAC
ATATCTACGCATCCATGTATCTATGTATCTACATATCTACGCATCCATGT
ATCTATGTATCTATATATCTACATATCCATGGAAAGAAGTACTTCTGTTG
ATTTAAATCAAGACAACTCTCTTTTGGTTGACATTTCTGATGCATTGAGT
GAACGAGAAAAAGTCAAATTTACTGTCCACACAAAGGATAATATGGATGA
CCAAAATTTACTTGATGAACAAAAGATGACTGAACTAAAGGAATTTCAAG
GAACAGAATTCTCAGTTATCCGTGATCATGAAGAATTTATTTGGTTACAT
GATCGATTTGTAGAAACTGAAGATTATGCNCGTATCTACATATCTACGCA
TCCATGTATCTATGTATCTACATATCTACGCATCCATGTATCTATGTATC
TATATATCTACATATCCATGGAAAGAAGTACTTCTGTTGATTTAAATCAA
GACAACTCTCTTTTGGTTGACATTTCTGATGCATTGAGTGAACGAGAAAA
AGTCAAATTTACTGTCCACACAAAGGATAATATGGATGACCAAAATTTAC
TTGATGAACAAAAGATGACTGAACTAAAGGAATTTCAAGGAACAGAATTC
TCAGTTATCCGTGATCATGAAGAATTTATTTGGTTACATGATCGATTTGT
AGAAACTGAAGATTATGCNCGTATCTACATATCTACGCATCCATGTATCT
ATGTATCTACATATCTACGCATCCATGTATCTATGTATCTATATATCTAC
ATATCCATGGAAAGAAGTACTTCTGTTGATTTAAATCAAGACAACTCTCT
TTTGGTTGACATTTCTGATGCATTGAGTGAACGAGAAAAAGTCAAATTTA
CTGTCCACACAAAGGATAATATGGATGACCAAAATTTACTTGATGAACAA
AAGATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014734-exon-sc0000197-1575043694:351701..351906 | TCONS_00014734-exon-sc0000197-1575043694:351701..351906 | Clytia hemisphaerica | exon |
| TCONS_00014734-exon-sc0000197-1575043694:344968..345006 | TCONS_00014734-exon-sc0000197-1575043694:344968..345006 | Clytia hemisphaerica | exon |
| TCONS_00014734-exon-sc0000197-1575043694:344663..344767 | TCONS_00014734-exon-sc0000197-1575043694:344663..344767 | Clytia hemisphaerica | exon |
| TCONS_00014734-exon-sc0000197-1575043694:344108..344301 | TCONS_00014734-exon-sc0000197-1575043694:344108..344301 | Clytia hemisphaerica | exon |
| TCONS_00014734-exon-sc0000197-1510915933:351701..351906 | TCONS_00014734-exon-sc0000197-1510915933:351701..351906 | Clytia hemisphaerica | exon |
| TCONS_00014734-exon-sc0000197-1510915933:344968..345006 | TCONS_00014734-exon-sc0000197-1510915933:344968..345006 | Clytia hemisphaerica | exon |
| TCONS_00014734-exon-sc0000197-1510915933:344663..344767 | TCONS_00014734-exon-sc0000197-1510915933:344663..344767 | Clytia hemisphaerica | exon |
| TCONS_00014734-exon-sc0000197-1510915933:344108..344301 | TCONS_00014734-exon-sc0000197-1510915933:344108..344301 | Clytia hemisphaerica | exon |
| TCONS_00014734-exon-sc0000197-1491911889:351701..351906 | TCONS_00014734-exon-sc0000197-1491911889:351701..351906 | Clytia hemisphaerica | exon |
| TCONS_00014734-exon-sc0000197-1491911889:344968..345006 | TCONS_00014734-exon-sc0000197-1491911889:344968..345006 | Clytia hemisphaerica | exon |
| TCONS_00014734-exon-sc0000197-1491911889:344663..344767 | TCONS_00014734-exon-sc0000197-1491911889:344663..344767 | Clytia hemisphaerica | exon |
| TCONS_00014734-exon-sc0000197-1491911889:344108..344301 | TCONS_00014734-exon-sc0000197-1491911889:344108..344301 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000197 | supercontig | sc0000197:344108..351906 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001683 | Phox |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0035091 | phosphatidylinositol binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0035091 |
phosphatidylinositol binding |
Blast
BLAST of TCONS_00014734 vs. Swiss-Prot (Human)
Match: SNX5 (Sorting nexin-5 OS=Homo sapiens GN=SNX5 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.780e-27 Identity = 52/81 (64.20%), Postives = 58/81 (71.60%), Query Frame = 3
Query: 234 DEQKERSTSVDLNQDNSLLVDISDALSEREKVKFTVHTKTELKEFQGTEFSVIRDHEEFIWLHDRFVETEDYARIYISTHP 476
D K RS SVDLN D SL +DI DALSER+KVKFTVHTKT L FQ EFSV R HE+F+WLHD +ET DYA + I P
Sbjct: 14 DRSKLRSVSVDLNVDPSLQIDIPDALSERDKVKFTVHTKTTLPTFQSPEFSVTRQHEDFVWLHDTLIETTDYAGLIIPPAP 94
The following BLAST results are available for this feature:
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