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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014639 ID=TCONS_00014639|Name=TCONS_00014639|organism=Clytia hemisphaerica|type=transcript|length=427bp
CATCACCACTCGAAAGAGCTCAGAAAAGAGCTCTCTCCAACATTACACCT
AACTTGGAGTTCGTCTGTTAATGTCTTAACATCAACTAATGGCTTCAAAC
ATCCACTACATTAGCATGAAGTAAAAAGCTCCATTCCTCAAAAGgACTTA
GAGATCACCTCGCTTCCTGTACTCTAAAAACACATGTTTTGTGTGTACTG
AATGAAACTATCTTTGGTCACTGGCGTGTTGGGGGATAGTGTAATATTGT
CGGCAAAGCATGATGGATCTGTCGTTTCATTATATGCGTCAACCTTCTTC
TATCGTCCTGACTGTGTTTTTTTAACAATGGGTTTTTAATTGAAATCTAA
CTGGTCTGCGATTTAGACTAGCCCCTCCTATGAGAAGAAAGGACCAGAAA
GATATGAAATTCACGGTTACCTTTGAG Run BLAST on NCBI transcript from alignment at sc0000191:414948..417527- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014639 ID=TCONS_00014639|Name=TCONS_00014639|organism=Clytia hemisphaerica|type=transcript|length=2580bp|location=Sequence derived from alignment at sc0000191:414948..417527- (Clytia hemisphaerica)
CATCACCACTCGAAAGAGCTCAGAAAAGAGCTCTCTCCAACATTACACCT
AACTTGGAGTTCGTCTGTTAATGTCTTAACATCAACTAATGGCTTCAAAC
ATCCACTACATTAGCATGAAGTAAAAAGCTCCATTCCTCAAAAGGTATGT
GTAATTTTGCAGGGAGGGGGCTTTATTGAAAAATTTCCATGAGATTTGTT
TTCACAAAGACTGTATGAAGACACCCCTGTCTTGCAGCCCTGGTGGAAGT
TTTCTCGCAGCAGGGATATAAACTTTTATCGGAAACCCAATGGAGAAAGA
AATTATATTTTCCAAGCTTAGAAAATCCAGTTGGGATGGTTTTGAAGTGC
AATTTTTTACTTTGAATTTCGAATATGGCTGAAATGAAAGTCACTTTTCC
AGTTGGGCTGAAATTGTAGGGTGTTTTTCCCACCGGGGACAAAACTTTAG
GCAGATTTTCCAGTGGGGAGGATCTGTGGCACAGGGTATGACACATGGGT
TTAAGAAGACATTAGCTCATTATTTGAAACCTAATGAATTTAATCTCTTA
GTATATCCCTTTGCTATCCCTTGCATATCCCTTGAGTTATTAGAAAATCT
TCACGAAATGCGATTATTTGACTTGGCTTTCACTAGAATTAATCAATTTT
CTGAGCTAACACAAAGACAAACAAAACAACTGATGAAGTTGTTGAAAATT
ACAGTCTCAAACATGCCGTGCAATGAAAAAAAAGAACCCCGCATGCCCCT
CTCTCTTGGGTTTGATCTCGCGCCAAAAACTTCGATAACCATAATATAGG
AACGTTATAACAACTACCGAATAGAATTCTTTCTCAAAAACAATCTAGTG
TCCTTTATCAGGGACCAGTAGGGGAGTTATTTCTTCGTTGCCATGGTTTC
ATTACCTGTTGACATCGTATCTCCTTTTATTAATTGAAGGAATGTTGTTT
TCTTATTTTGGATATTGCAAATTTTTACAACGTTTTTTTATATAAGAACA
ACAAAAAATTCAACGAATTTTGAATTTTGTTTTAAAATTAGTAGTTTCAA
TAACATGTTTTCCGGTTTTAATTATACGATAATTTTAAATCTTGAAATCT
AAACTGAAGATAAGTAAAGTAAATTGACCAAAGATTCATGACGTCGCAAT
TTTTTTTATTATTTAAAACCTGTGTAAATTTTTCGCATAAGTTTTTCAAT
AACTTTTAATAATTATTTGAATGTTATGCGATTTTACAGGATTTTAGCTG
GGTTTTATGAACAATGTTGGCAATAAAGTCATCAAACCCGACCTGTTGGG
TATTTCGAATTAAAAATTTGGTAGACTGTTTTTATCAAAAGGCATATGTC
TTAACAAATTTTTCTAGGAGTCCTTAGCAAAATAATGCCAGGGTGGTGTA
AAGTACCCCCTGGTAAAAAAATATTATTTTTAAATATTTTAACTAATCGT
TTTTTTTTAATTTTTTTAATTGATTTCCCCATTTTTTCAAATTAATAAAC
AACCTATGATACCCTCATTATGTATAAAGTATTTCAAAAAGAAGTTTGGA
TTGCAATAATTAGCTAGAGGTTGAATTTCCATACTCATTATCAAGGTTAA
GCTTGATTGTTGTTCTTATAACAAAGACACGGCATCGTTTTATAATACAT
CCTCCAAACTTTTTAAATTTTGATTTTATTTTTATTTATAGGACTTAGAG
ATCACCTCGCTTCCTGTACTCTAAAAACACATGTTTTGTGTGTACTGAAT
GAAACTATCTTTGGTCACTGGCGTGTTGGGGGATAGTGTAATATTGTCGG
CAAAGCATGATGGATCTGTCGTTTCATTATATGCGTCAACCTTCTTCTAT
CGTCCTGACTGTGTTTTTTTAACAATGGGTTTTTAATTGAAATCTAACTG
GTGAGTGATAATCTCTTATAAATACACGGGTTGCAAAATTATATCAGTGC
AGTCAAAACATGTGATTACTCGAAAAAGTTCACGTGATTTTATTCCCATG
TTACTTACTTTACAACTTACATCTGATAACTTTATTAGTGTCAATAAATT
CGAACCAATCAGAAGCATATAAAGATTTCGAGTAAAAGCGTGATTTGTCT
TCAGACTTTAATTTTGCAACCCGTGTATTCATGAATATTAAGGACTAAGA
GAAGTTAAATGAATACACGTATTTCCTATTAGTGGATTCATGTAAAAAAG
TCATGAAAAACGTCGAGAAAGTCTCTGATTGGCTGAAATATTGCATATAC
AAGCATATTTTTCAAAATGTCCAGAGTATGAGGTAATCTTTGCATGCCTC
CGCCAATCAAAAGTTTGTTTACTCGACGTTTTTTCGTGACTTTTGCATGA
ATCTGCTAATAGGAAATAGGTGTATTGCTTTCCCAGAGTTTTCCCGAATT
TTAGACGATTGGAAAATATGATACTTTACCTAGTATTCCTAGCCCTCTTT
AGGCTACTGACATCCACTAACGGCTTCATGCTCCTTATACCTGCGCTTTT
TTACAGGTCTGCGATTTAGACTAGCCCCTCCTATGAGAAGAAAGGACCAG
AAAGATATGAAATTCACGGTTACCTTTGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014639-exon-sc0000191-1575043694:417384..417527 | TCONS_00014639-exon-sc0000191-1575043694:417384..417527 | Clytia hemisphaerica | exon |
| TCONS_00014639-exon-sc0000191-1575043694:415628..415836 | TCONS_00014639-exon-sc0000191-1575043694:415628..415836 | Clytia hemisphaerica | exon |
| TCONS_00014639-exon-sc0000191-1575043694:414948..415021 | TCONS_00014639-exon-sc0000191-1575043694:414948..415021 | Clytia hemisphaerica | exon |
| TCONS_00014639-exon-sc0000191-1510915933:417384..417527 | TCONS_00014639-exon-sc0000191-1510915933:417384..417527 | Clytia hemisphaerica | exon |
| TCONS_00014639-exon-sc0000191-1510915933:415628..415836 | TCONS_00014639-exon-sc0000191-1510915933:415628..415836 | Clytia hemisphaerica | exon |
| TCONS_00014639-exon-sc0000191-1510915933:414948..415021 | TCONS_00014639-exon-sc0000191-1510915933:414948..415021 | Clytia hemisphaerica | exon |
| TCONS_00014639-exon-sc0000191-1491911889:417384..417527 | TCONS_00014639-exon-sc0000191-1491911889:417384..417527 | Clytia hemisphaerica | exon |
| TCONS_00014639-exon-sc0000191-1491911889:415628..415836 | TCONS_00014639-exon-sc0000191-1491911889:415628..415836 | Clytia hemisphaerica | exon |
| TCONS_00014639-exon-sc0000191-1491911889:414948..415021 | TCONS_00014639-exon-sc0000191-1491911889:414948..415021 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000191 | supercontig | sc0000191:414948..417527 - |
Blast
The following BLAST results are available for this feature:
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