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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014379 ID=TCONS_00014379|Name=TCONS_00014379|organism=Clytia hemisphaerica|type=transcript|length=498bp
ACAGAGTTTACAAGGATATTTTGAACTGAGTTGCATCTTGGTGACCATTA
TTCTTTTTTTCACCTGTCTCCTGTACCACCCTTTCTCACTGGTCATCgct
caaaaagtcaaataccATCTAAAGCGGTTAAGTGGCGGTCCgcttatgac
gtcatcgttgGCCAATCAGATGCGTCAGCGTAAAAGAAGCCCTTGTCCGA
TCTGCTCACAAAAGTTTCCTGAGGAGAACGAATATAACAGTTTGTACGAA
CCGCGTCACCCGCGCGCGCGGTCTGTCAGTGCGCACTACCACCGTGAAGT
GAGGTTTCAAAGTCAATATTATTTGGAGAGGAATCGGAAGATGTGTAGCG
AGTGCACTGAAAGGTTCGTTGTCGTATTTCGTCTGGTATTTTAGCATTCA
TTATCAACTTCATTATGTTCGTATGTTTATCGGAAATGTTATGTTATTCC
GGATTGAAAGAAGTTCCGAGATTCAAATCATGGTGGTTCTTCGGCTTC Run BLAST on NCBI transcript from alignment at sc0000187:290298..292542+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014379 ID=TCONS_00014379|Name=TCONS_00014379|organism=Clytia hemisphaerica|type=transcript|length=2245bp|location=Sequence derived from alignment at sc0000187:290298..292542+ (Clytia hemisphaerica)
ACAGAGTTTACAAGGATATTTTGAACTGAGTTGCATCTTGGTGACCATTA
TTCTTTTTTTCACCTGTCTCCTGTACCACCCTTTCTCACTGGTCATCgct
caaaaagtcaaataccATCTAAAGCGGTTAAGTGGCGGTCCgcttatgac
gtcatcgttgGCCAATCAGATGCGTCAGCGTAAAAGAAGCCCTTGTCCGA
TCTGCTCACAAAAGTTTCCTGAGGAGAACGAATATAACAGTTTGTACGAA
CCGCGTCACCCGCGCGCGCGGTCTGTCAGTGCGCACTACCACCGTGAAGT
GAGGTTTCAAAGTCAATATTATTTGGAGAGGAATCGGAAGATGTGTAGCG
AGTGCACTGAAAGGTATGTAGTAATGATACGGAAATAACACGGACATAAT
ACGGATATTGTCGTCACGTCAATAGTGAATTGTAGAACCCAGAAATAGCA
CCgttgtaattttttctaatttgacGCTTACTCCAatgggtttttccaga
aaaacgTATACGccggtccatttccgttccaaggggttaaggtttgatat
gtggcggaattccatagggagatacaaaatcTGTTAagaataactggaat
tccatgggggtagctttttaaatcttcctaaaattcagaattccagaagA
GTtcaaacctgaaattgcctggaattgcAGGGGGTTACAGTatttccagc
cacagagggatgAACCTCTTCAACAGGGGGTATGCAGCTAATACGTGgct
aaaattcattaaaaacctagaattggaacaattttttcgaaaaaagggGG
ATTGATGGCATCATGTACGTCTACTTGTATGGTTCTGTAAATTATTCCTC
GTGTGCAAGTTCAAATTTGCACAGCCATAGAACTTTTACCAGCTTCAGGA
TGATTAGCATGGTCATTTCCCCCCTTGGTCATTTTCACttgcaaacttaa
aaaaagctaaaatattttgcaatcgGTTGTTCATTCCATTTTATTTCCAT
GCAGTgaggtggacgaacatttcaaGGGGGTCTAAGGgacgtttttaatt
tttccatgGGGAAAGAAGATATTTAGTTTTAGCTCATCCAACCTCACTTA
AAGGTATGAATAAGCCATTTTTAGGGGGTATCAACACATTTTCAACAATT
ATCTTCTAGCTTGAGGTAATTGAATGGACCAgtcaaatctttctctaatt
ttttaggcgttgaattagaaaaaaaggtCATCCTATAGCACCCAATATTC
ATGACTTTCCACCTTTGTTGCAATTCTAAGAACCCATTTTATGTCCTAAT
TTATTTCCAGGAAGGATCTGTCGGTCATTTCTCGCATCCATTTCCTTCGT
CTCTTGTGTTTAATTGGTTTGGAATTAATCTTGATTTTCTGGACAAAAGA
TATTGGTGTAAGTAAATTCAAAGATTTCCAGTATCGGTCTCATAAAAAGT
TGTTGTGTTTTATAGAACTGACTTTAAAGTGAACACAGATGATGGTGTTT
TTTAGGTGTCCAGTTTTTCAGTGTCCGAAAATCTTCGATGCTCTTTGAGC
ATCATagctttgaaatttcctgaaaCCTGAGCTGAAATGAAGACGTACAG
ACTTAATGTTTAGTGCCTGTGACAGGTTCGCTGTCGCCCTACGATTGACT
CCTTTTGAATCCGTTGAAATACAATTACAGTTGACTgttgctaattcgaa
ctcgactGGGATATTTCTTTTGTTCGAATCACAGAGAAATTTGAATCACT
GAAATTATCATATGAGGGTAACGTCTTTACTCTATTAATTGATTCAAATC
ATTCAAAgattacaatgaagtgaatacagtcgctctcatgttgtcttcta
ACCAGCCACCAGAACAGTTGGgaaaccaacggatccggcgagactcgaac
tcacacccatgccattcgcgggcatttgctctaccatagagctacgggtc
catgtgGAACCCGAGGACTCGATTGCCACTCGGTAGAgctggaagtgaat
tcttgtctactgactTTCAAAGATTATAATAATAGAACTTGCAAATAAGC
GAGGGTCCGTTGCCCTATACTGGTCGATCCTTTCAATCCCATTCTTTTTT
TCGTCTTTAGGTTCGTTGTCGTATTTCGTCTGGTATTTTAGCATTCATTA
TCAACTTCATTATGTTCGTATGTTTATCGGAAATGTTATGTTATTCCGGA
TTGAAAGAAGTTCCGAGATTCAAATCATGGTGGTTCTTCGGCTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014379-exon-sc0000187-1491911889:290298..290660 | TCONS_00014379-exon-sc0000187-1491911889:290298..290660 | Clytia hemisphaerica | exon |
| TCONS_00014379-exon-sc0000187-1510915933:290298..290660 | TCONS_00014379-exon-sc0000187-1510915933:290298..290660 | Clytia hemisphaerica | exon |
| TCONS_00014379-exon-sc0000187-1575043694:290298..290660 | TCONS_00014379-exon-sc0000187-1575043694:290298..290660 | Clytia hemisphaerica | exon |
| TCONS_00014379-exon-sc0000187-1491911889:292408..292542 | TCONS_00014379-exon-sc0000187-1491911889:292408..292542 | Clytia hemisphaerica | exon |
| TCONS_00014379-exon-sc0000187-1510915933:292408..292542 | TCONS_00014379-exon-sc0000187-1510915933:292408..292542 | Clytia hemisphaerica | exon |
| TCONS_00014379-exon-sc0000187-1575043694:292408..292542 | TCONS_00014379-exon-sc0000187-1575043694:292408..292542 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000187 | supercontig | sc0000187:290298..292542 + |
Blast
The following BLAST results are available for this feature:
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