TCONS_00014363 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014363
Unique NameTCONS_00014363
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2007

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014363 ID=TCONS_00014363|Name=TCONS_00014363|organism=Clytia hemisphaerica|type=transcript|length=2007bp
AAAAAGCAAAGAGGGGGAGGAAAAGCTAAAAATTATTCATGGATGAATTT
CACATGTCAAGAGTGTATGAAGTCAGAATTAAAATTATTTCGAAAAAAGA
AAGCAATGAGATAAAGAAATGAGATGGGTGACAGacttaaagaaaataat
aatagtATTCCTGGTAAATCAGGAGCTGCGCATGCATGGAACATAGcttT
TAACGATTTGAAAAGGAGATTTTGGCAGAGCCAGACAGACAATCAAAATC
TCCACGCTGAAGTGAAACAACTAAAGGACTACATATCGTATTTGGTGAAG
CAGAATCGTCATTTGAACAGCTTGCTTGCATCCAAAAATCTATCCCTTAC
CAAAATGGAGGAGAATCAAAAAACACTACGCGACCAAGAGAAGAAACAAG
ACCAGTACCTTAAAGATGTGTCCTCAAAGATTGAAGATTTGAATGCCGAA
ATCAGTTTGTATCAAAAAGAAAGATCTAAAGTTATTAATGAGAACCAAAA
CTTTAGATCTACAATAGAGCAATTGTACAAAGACAAGAAACAGattgaaa
atgaactggaaaatctgaaaaacattCCAGAAATTTCCATAAGCCCAACC
ACTTCTACTGCAACAATTACAAAAAATGAAGTCAACAAGGAGTTTGAAGA
CCTTTTATCTGAAAATAAACATTTGAAGACCAGCATTCACTGGATGAGTG
ATGAATTGAATAAGTTGAAAAGTGAGAAACAGATACACGATATCCAAAGA
ACTACTTATCCACAATCTGGTTGTCTTGAAGAAGGCATTGGGAGGTTAAA
TTTAAGTCAATCCATTAACACCAAAAGTATGGATATTGCTGGATACATAA
ATATATTGCACAACACCATAAGTGTTTTAAAACATAACTTGTCAAGGAGT
CTTACTTATTTACGgattgtttcaaaaacaaactCATTGAGATTAGACAC
CTTGCCAAAGAAAGATGACCTGCTATATGACTCTGGTATTGTCAATATGG
AACCAAACAATGATGACCAGCAAGTGAATTTCAATATCCAAATGGCAGCT
GGCAATCAAGACCAACACTACCCTGATCAATCAAATGCAGAACCAAATAC
TCACCATACTATTCACAAAGTTAATAGCAGCCCTGAACTTTATCCATCTC
TTCTTCAGAATCTACAAATGCAGCAAACAAAAACTTATCTGAATTCGAAT
CATGGCCCTGTGAACCAATACAATGAGAACTTACCCATAGCTCCAGTTCG
TCCACCAAGAAGGATACCTCTTTATGAAGAATACAGTAGTGATTGACATA
TTTTGACTAAGCCTCGTAACAAACAATTGTGACTCTACAAGCGAATTGCA
CCAGAAATCAAACCAGTCTTGGGACATGATTTTGTAAGGGCCAGTGGATA
ACCAGTAAAAATTAACCAAAGGCTGTTATGGGTCCAGTTAATTTTAAGTG
GCCATCTTGTAACATCTATTTCAACATTCCAGCTATTGACTATTGGCTGG
TCTACATTCTtctaacaaattttttttaacaaacacaTGGGCCAGTAAAA
AAAGTGACCCAAACTGTCAGGGACTGGTCGTAATCAAATAAAGGCTAATT
TGAAAGAAAGCCTGTACAGtgagaatttgaaattttatccaGTTGATCAC
CACAAGACTGCTCTTAAATGCAGTACCATTACTCGTCGGATTTTCAGATA
CTTAGTattgcttggggagtcacaattAAATTTAAACAATTAAATATCAT
ATTGAGTATCTTTGAAGGAAGATAACTTACTAGATTGATTTTTATTACGG
atgcaaaaaaatcacaatAGGCTATTAAATTGGTTTTTGATTTGAATAGT
CTGAATAGCATATTTTTCTTATGATACGTTTTTGTGAATTTGATATGGAG
TGAATTTGTACATGAGAGgtgtttattttcaaaatattatttataaACTA
AAAGCTATAATTGTTATGTCAAATATGTCTTAAATCTTATCATTTTATGT
TTCAAAT
Run BLAST on NCBI

protein sequence of TCONS_00014363-protein

>TCONS_00014363-protein ID=TCONS_00014363-protein|Name=TCONS_00014363-protein|organism=Clytia hemisphaerica|type=polypeptide|length=390bp
MGDRLKENNNSIPGKSGAAHAWNIAFNDLKRRFWQSQTDNQNLHAEVKQL
KDYISYLVKQNRHLNSLLASKNLSLTKMEENQKTLRDQEKKQDQYLKDVS
SKIEDLNAEISLYQKERSKVINENQNFRSTIEQLYKDKKQIENELENLKN
IPEISISPTTSTATITKNEVNKEFEDLLSENKHLKTSIHWMSDELNKLKS
EKQIHDIQRTTYPQSGCLEEGIGRLNLSQSINTKSMDIAGYINILHNTIS
VLKHNLSRSLTYLRIVSKTNSLRLDTLPKKDDLLYDSGIVNMEPNNDDQQ
VNFNIQMAAGNQDQHYPDQSNAEPNTHHTIHKVNSSPELYPSLLQNLQMQ
QTKTYLNSNHGPVNQYNENLPIAPVRPPRRIPLYEEYSSD
Run BLAST on NCBI

transcript from alignment at sc0000187:147375..158432+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014363 ID=TCONS_00014363|Name=TCONS_00014363|organism=Clytia hemisphaerica|type=transcript|length=11058bp|location=Sequence derived from alignment at sc0000187:147375..158432+ (Clytia hemisphaerica)
AAAAAGCAAAGAGGGGGAGGAAAAGCTAAAAATTATTCATGGATGAATTT
CACATGTCAAGAGTGTATGAAGTCAGGTATGTTCGAAACTTTTTGGTAAC
TGGTGTGATAAGCTTTAAGGGTCTAAGCTAAAAGGAAAGAATAGAGGGGC
AGGCTGTGGTGgggattttactttcattttcttttacttttccctCATCA
GTATAGTTTCATTTTAGATTTCAAGCCAATATCTTACCAATGGAGTGCTC
ACTAATAATTTTAGGGGCTTGTACAAAAGACAAAACATACTTGGTGCACC
ACAAAAAATGCTCGCGGATTGCCTTTTTTGTGagttttaatagacctttt
cggcTTTCCATCCGCCNTGATTGTGTTTTTTGTGagttttaatagacctt
ttcggcTTTCCATCCGCTATCTTGAATACActgtttaggagtgtcgactg
cgcacgcttcaatccaattttccattgttttgattttagcgatcatggaa
aattcactctcctccgtaaaaaaacggtaggtaaacatctagttctcata
aggaaacatagcagaaaaacggtaggtaaagaactccttttaatcataac
ttcttttcctcttgatgaatttttgtgaaattttcaggagagacttatNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNctaaatcattctctttaaaggagagaaaaaaattcacaatgtttaca
ttcctctaagctttcacagtactaaagtgcgcatttttacctaccatttt
taccggcatctgcaatggagtaccgtgaagatagcgagactcctaaacag
TGTAtggtatgcaaaaatagaggaacaaaAAAACAGTGGTtgaatttagt
tggaaaatatgcaaaacatatgcaagtttacacaaagattaaaaggacaa
aaagcatcttataaagaaatattataatcattagaacaataaaagatgga
atttcttaatccaaaaagaaatatttacagaacaacaaaagccttttaga
aatatgttcttaaagacattgcatattctgttttcatgccattaaagaat
tccaccaagacggagtacacacatcaaactttcaaaacacgcaaactgaa
agcagtagttatgacgtcacacattcagcgggttcaaatcaatgttttga
tttgatcgtctgacggttctattcccaggagaataatttaccgtcagccg
aataaggaatatttttgtcctttgcaggtgatttttcagcttgagtttat
gtctaatgttatggttttttgaagtgcttgttctaagagatgagcgaatt
tgattatatctagttttcaaaagaagcaaatttaatctttcttctacaag
attacactttaatataatgctaattatgcatgtaagttttacattaatac
tttctttttgcatatgttttgcatactttctaaggtaatttcaccacggc
aattcggccaccataatttttgcataNttcttctacaagattacacttta
atataatgctaattatgcatgtaagttttacattaatactttctttttgc
atatgttttgcatactttctaaggtaATTTCACCActgcaatttggccac
cataatttttgcatacaattcaatatggcggatggaaaggcgaaaaggcg
AAAAGGTTTATAGTGACAGCCACTTTGATCACCACAGCATAGTTGCCAAC
TTATGAGACTGGAAATGCGGGACAACGAGAGCGAGCGGAGTGAGGGGGAA
AAATCGAGCTGGGGGTTGGGGACGCTCTAAGCCCCCCAATGGGGGTGTTA
AAGGTTAAAAATTTTGGGCCAGAAATGACGTAGGaagctataagcaaaaa
gctcgtacccaaaaattttaaaaatgtcaaaaaatgaaggtcttcaaatc
tctctaaaacctatttttatgggAAGCTATGGTATTTTGTANNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNaggagaaaaaatcatcaagttttgcattttcttctcat
tgacttcatttttaacccctacttttaaccatttttgaaatctacataaa
atttccgaCAATTTGACATATAACATGCATATGTTCCCGAATAATCAACA
TAGGCTAAATCTGAGCCTGCTGCTACGGTactgaaaaaactgctttggaa
tgatgtccttattacagggtttttttttcaggtatagaTTCANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNATGTCCTGAAAAAGAACTCAActcaaattattat
gctttaacagctaaaaatagacatgggtacgagctttttgcttatggcTA
GGAACggctaaaataaaaacaatatcgatcaatgaaaaaaacactgtTGT
GGAGCAATGCCGCCTTTAGCTGCGAATCACGCGCATTAGCCTCAATAAAT
ATTAGGTGTACTGGTTCATATAGTACTATTACATCTCTGTCCAACGCGTA
TCTGATGTATTGAATACGAACGTACGCAATTGGAAGGACCGTTACGGAGC
gaagagaaaaaatgaagaagtgaGTTTGTGCTTGTAGAAACATATTTTTA
Gtacgtcgcatcaaaataagaaagccttaagtccattttttcaaaaattg
agttatgaccataccgatgctttacaccccattttttatcgaatttttgG
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNCGCAATGGTATAAGTGACAATGTTGATACTTTAGAACTT
GAAAGATCTTTCTTCATTTATATTCATATCAAAAAAGCAGCTAGCTAGCC
CAACATGGTCAAAAATGCTAGCcatttcaaacctttaaacttgattttct
caaaactacaaaaatggacttaaggctttcttattttgatgcgacgagta
gcatttctatattttttccaAGAGTTTTCTCGAAAATGCGGGACATCTAA
GGTATGTGGGCGGAATTCGAGACACAAAGAGCTTAAATGCGGGACTGTCC
CGCTCAATGCGGGACGGTTGGCAACTATGCCACAGACTATCTGACCCTGG
TGCCATTGATATTTCCTGATACTTGGCATAGTTCTTGatcattttgattg
attttagaTGGTTTACTTGTCTTGTTGCACTTTTGGAGCCCTCCAAATTA
TACTCCAGATTGCgatttatttgaaatttgaagtttTGATCTCTATTTGG
CTTATCATTTGAAATCGGAAGAGGGGTTTAAAAAGGATTATGCTTTGATT
TTCCTAAACTTCTTAGGGCACTGAATATGAGCCTGAAATTTCATGACATT
TAgccaaacagaaaaaaaaagacaggactctaaatattgacaaaaagtCA
CAGGCATATTCTGTCAACttctctaacttgggactatctgacaaaacatg
gaacggcaattcggccaccatttcatcAAACAACTCCCAAAGTTATTTGA
TTTCAGTTAAGGAACagcgtatttaaaaatacacaatttctctttcgatt
ttacagtataAGTGAAAATACTGACCAGATATGCAaaagtcccatgtttc
gaccaatcgtcccacattagagcagttgacggtttttgagagctttttga
cctattttttgtaaattttgagtTCAGTAAAAGGCTGGATGGCCATCTTA
GGCTTTATTTCACCATTTTTACTTACTGTTttaatctctttgacaacaag
tttgtttttttaatactTGGGCGATTTGCGCTAAATCTGTACCATCCTGT
CCGAAATCATTTTTCGCATATACAGTATCTCATTAGGTTAAgtgttaata
atttttttcttttttcatcagaCAGGTTGGTACTGCACTGGTAcactttc
tgcaaaatttcatgttttaactGTCTGTCAGTCTGCAATCATAAATTTGT
GCCaatttttccttgttttggcaatttttagcACTTTCTTTCCAGAAAGG
TATTTGACCTagaattttgattttccatATAGGGAATTTATTCATATtgt
gtttttctacaaaaaaagggttttgaaaccttttttccatCTTGCTCTAG
CAGTGATTTTCTGTTCACGTCCATTTTGACACCAAAATGTGTCCTGTCCG
AAATCATTACACATTGCCCCCATTTTAAGAGTGCttattgaagatttttt
aagtTTGAGAGTAAGTTCAATCTGAATGTGTttgaaaatcagtcaaaaaC
TATAATTTTACCATCAGGTTACCCTTCTATAGGTCCTAGTGCACAAAAAC
CTTATAATCTTTAGAGATTgcttactttgaaattttctcatttttgtaac
ccttttaccgggggggggggtactagggttgcaagctgacAGGCATGTGT
CGCCCGACTTTTGGTGGGTGAGCCCTTAGAGGGATTAAAACTGATCCTTA
GAGGGACTGAAATCGATAGAAAAAccgatttttcttgaattttgtgaccc
ttattgggactttTTTTCGTGAAATTTAGGCTTTTCAGGGTCAAGAAATT
GggtttttacaacccttatagGGGGactaaaattagatttttgatgTCCT
GTCCGAAATCACAATAACATAGTGTCCTTCAGGTTCTCTTCCCCCCATGc
atagaatgaaaattttccatccccccCCCTCATTTTTCCCCGCCCTGCCT
CCAAAATTTTTTCTGTCCCCCCCTCAAGCATAGaattaaaaagctgtaat
ttgatgaacttaacgcttattgttttccctaaggtagttctaattcaaga
ataaatggaaaggatggttgtttttaaaccataatattaataaaactaag
cattatgcgatatcatctcataaaaccagatgtttttcaattttgaattg
attttggtgagttcccccccatgcctagaatgaaaattttccattccccc
ccTCGTTTTCCCCcaccctggcttcaaaaaaaattcttttccccctatac
gtccttttgacccattccccccctgaatccagggggggaggacactatga
ataAGATTGAAgatatttctgaaattttgcatggtagaaagatttgaatg
cCTGAATATTGTAACCTAGGATAGAGCATGTTTTAATTGAGTAGATCTAA
GATTCAAAGCACATtagatttgattttaggggtGTTAGAAAAATATGTCC
CATCCGAAATCCCTTGTCCCGTCtgaaatcataaattttatatcTCTTTT
ACAGTAGCTTAAAGCCACctgatttattttcattccatCGAGTGTCCCGG
GCAAGTTTATGGTAAAAAAGAAGCTCTTGAGAAACTCTTCAGCTGTCTTG
AgtcataataataaaaaaaagccacctgatttattttcattccatAGAGT
GTCCCGGGCAAGTTTATGGTAAAAAAGAAGCTCTTGAGAAACTCATTGAG
CTGTCTTGAGTCAtaataaaggttttttttaccATGAATTTACCAATTAC
CAATTTCATATGGTCTAACAGCTCATGAGCCCCTATATCTTTATAATAGG
CCTTAAAATGTGGTGTCAAGGTACATTTCCATGAAATATAGGCTATAGAC
TGTCATAAAAAAGCAGAGTGATgttaaaaaaaagaactttatttttcatg
atttcggACAGGACACGGTACAGATTTAGCGCAAATCGCCCACTTctacc
aagtttatcaatcaaacttttacCATCTCATAATGTGCAACCAAATgtat
ttttcaagcattttgaaagtacataatttgaagaGAAATTAACAATTTAA
ATCACAGTCACGCTGCTCACATCTTGACACcatttttttgtgttgttttt
ctctagagACTTTCTTCCAGCGTGCACAAGTAGATTAGTTACAGAGTGTT
GATAACAAATCTCACAAAGATTTGTTCCTTTTGCGGCATGTAAGCCTACC
TGATGAGAGTAGTGTATTCAAATTATTTGCCATCTATAATTTGCGgtatg
ttaattaaatgactttggaggttcggtagaaaatatttctttcacaTTTT
GGCACTAAACCTGAAATTAATCCGATCGTGGTTATAGGGCAGTTTTAGCT
AGATTCGTGATTCATTCGTGATTCTAATCACAAGTTTGTGATTCAGGGCA
GTTTTAGCTGGACTAGTGATTCTAGGGCAGGTTCagctcgcagcggttca
cttggctagtgaatgaaccttcgcccgggtcaacccatcaTGCAATGTGA
GGTAATTgcgtagtcagtccaaggtgctgacagggcgctcattgaaagcg
tctatagttgcaaaaataggcctcaaagcctcctgcaacttaaccaaaat
agaaatagaaactgCTGCACTCATGACTCTCAGGGCAGTTTTAGCTGGGT
TTGTGAACTCTTGATTCTAGGGCAGGTTCAGCTGGGTTCGTGATTCCAGG
GCAGTTTCAGATGGATTCGTGATTCTAGTGCAGTTTCAGCTGGATTCATG
ATTCTAGGGCAGGTTTAGCAGGATTCTTTGTTCTAGGGCAGGTTTAGCAG
GATTCGGGATTCTAGGGCAGTTTCAGCTGGATTCGCGATTTTAGGGCAGT
TTCAGCAGGAttcgtgattctagggcagtTTCAGCTGGATTCATGATTTT
AGGGCAGTTTCAGAAGGATTCGTGATTCTAGGGCAATTTCAGCAGAAATA
CTTTCAGTTGATTATGATTCTGCTAGATATAAAATAGACATTTTTCAACC
AATGGATGTATCAACTTTGCAGAATaagaaatgtcaaaatttgatgaaCA
ATTTACCCAATctcgtgaaaatttcagatttaaGCTATACTGTATGCCCC
AGTTGACATCCTGGTTTGATTCTTAGTTTGATTCTTAGTCAGGTTCTAAG
TAATgaattttgaactttgaaatGGACATAAAAAACCCTCTTTTCCTATT
TAGAATTAAAATTATTTCGAAAAAAGAAAGCAATGAGATAAAGAAATGAG
ATGGGTGACAGacttaaagaaaataataatagtATTCCTGGTAAATCAGG
AGCTGCGCATGCATGGAACATAGGTAAGAAATTTGGAGTTTACTAATCAA
TTTAAATTGACTAAAAACTGCTAATGATTCATCATTCTCTTAAGAGAGTG
CTTGTTAATGTGCAAGCCAATAACATATCAATTATTAacacttaattttt
tttattatgataCAGAAGCTTATTTGGTTTGATGAACttcattttattta
cttttgcTTCTTTATTAAGTACTGtgcttgaaattattttcttttattta
aaagcttTTAACGATTTGAAAAGGAGATTTTGGCAGAGCCAGACAGACAA
TCAAAATCTCCACGCTGAAGTGAAACAACTAAAGGACTACATATCGTATT
TGGTGAAGCAGAATCGTCATTTGAACAGCTTGCTTGCATCCAAAAATCTA
TCCCTTACCAAAATGGAGGAGAATCAAAAAACACTACGCGACCAAGAGAA
GAAACAAGACCAGTACCTTAAAGATGTGTCCTCAAAGATTGAAGATTTGA
ATGCCGAAATCAGTTTGTATCAAAAAGAAAGATCTAAAGTTATTAATGAG
AACCAAAACTTTAGATCTACAATAGAGCAATTGTACAAAGACAAGAAACA
GGTTTGCTATTCATaatgtttttcaaattcagttttATAAAAGTGGTTTG
TTGGTTTTTAATAATCATTTATAGGGAAATGCAACTAAATCCATGAATTT
ATTGTGAATCTAGTCAACATGATTTAGATTCTTTTTCTGTTAAATTTCCA
TTCCACTACCTTTGTGACTCTGCAGATAAAGTCAAATACAAACTAAAGAT
TTTTACACATTTgtcacactttttttttatttcccacTGTATATCAAGCT
ACAGAGCAAACATTTCACATGcattttttaaaataactttttagattgaa
aatgaactggaaaatctgaaaaacattCCAGAAATTTCCATAAGCCCAAC
CACTTCTACTGCAACAATTACAAAAAATGAAGTCAACAAGGAGTTTGAAG
ACCTTTTATCTGAAAATAAACATTTGAAGACCAGCATTCACTGGATGAGT
GATGAATTGAATAAGTTGAAAAGTGAGAAACAGATACACGATATCCAAAG
AACTACTTATCCACAATCTGGTTGTCTTGAAGAAGGCATTGGGAGGTTAA
ATTTAAGTCAATCCATTAACACCAAAAGTATGGATATTGCTGGATACATA
AATATATTGCACAACACCATAAGTGTTTTAAAACATAACTTGTCAAGGAG
TCTTACTTATTTACGgattgtttcaaaaacaaactCATTGAGATTAGACA
CCTTGCCAAAGAAAGATGACCTGCTATATGACTCTGGTATTGTCAATATG
GAACCAAACAATGATGACCAGCAAGTGAATTTCAATATCCAAATGGCAGC
TGGCAATCAAGACCAACACTACCCTGATCAATCAAATGCAGAACCAAATA
CTCACCATACTATTCACAAAGTTAATAGCAGCCCTGAACTTTATCCATCT
CTTCTTCAGAATCTACAAATGCAGCAAACAAAAACTTATCTGAATTCGAA
TCATGGCCCTGTGAACCAATACAATGAGAACTTACCCATAGCTCCAGTTC
GTCCACCAAGAAGGATACCTCTTTATGAAGAATACAGTAGTGATTGACAT
ATTTTGACTAAGCCTCGTAACAAACAATTGTGACTCTACAAGCGAATTGC
ACCAGAAATCAAACCAGTCTTGGGACATGATTTTGTAAGGGCCAGTGGAT
AACCAGTAAAAATTAACCAAAGGCTGTTATGGGTCCAGTTAATTTTAAGT
GGCCATCTTGTAACATCTATTTCAACATTCCAGCTATTGACTATTGGCTG
GTCTACATTCTtctaacaaattttttttaacaaacacaTGGGCCAGTAAA
AAAAGTGACCCAAACTGTCAGGGACTGGTCGTAATCAAATAAAGGCTAAT
TTGAAAGAAAGCCTGTACAGtgagaatttgaaattttatccaGTTGATCA
CCACAAGACTGCTCTTAAATGCAGTACCATTACTCGTCGGATTTTCAGAT
ACTTAGTattgcttggggagtcacaattAAATTTAAACAATTAAATATCA
TATTGAGTATCTTTGAAGGAAGATAACTTACTAGATTGATTTTTATTACG
GatgcaaaaaaatcacaatAGGCTATTAAATTGGTTTTTGATTTGAATAG
TCTGAATAGCATATTTTTCTTATGATACGTTTTTGTGAATTTGATATGGA
GTGAATTTGTACATGAGAGgtgtttattttcaaaatattatttataaACT
AAAAGCTATAATTGTTATGTCAAATATGTCTTAAATCTTATCATTTTATG
TTTCAAAT

Coding sequence (CDS) from alignment at sc0000187:147375..158432+

>TCONS_00014363 ID=TCONS_00014363|Name=TCONS_00014363|organism=Clytia hemisphaerica|type=CDS|length=3519bp|location=Sequence derived from alignment at sc0000187:147375..158432+ (Clytia hemisphaerica)
ATGGGTGACAGacttaaagaaaataataatagtATTCCTGGTAAATCAGG
AGCTGCGCATGCATGGAACATAGcttTTAACGATTTGAAAAGGAGATTTT
GGCAGAGCCAGACAGACAATCAAAATCTCCACGCTGAAGTGAAACAACTA
AAGGACTACATATCGTATTTGGTGAAGCAGAATCGTCATTTGAACAGCTT
GCTTGCATCCAAAAATCTATCCCTTACCAAAATGGAGGAGAATCAAAAAA
CACTACGCGACCAAGAGAAGAAACAAGACCAGTACCTTAAAGATGTGTCC
TCAAAGATTGAAGATTTGAATGCCGAAATCAGTTTGTATCAAAAAGAAAG
ATCTAAAGTTATTAATGAGAACCAAAACTTTAGATCTACAATAGAGCAAT
TGTACAAAGACAAGAAACAGattgaaaatgaactggaaaatctgaaaaac
attCCAGAAATTTCCATAAGCCCAACCACTTCTACTGCAACAATTACAAA
AAATGAAGTCAACAAGGAGTTTGAAGACCTTTTATCTGAAAATAAACATT
TGAAGACCAGCATTCACTGGATGAGTGATGAATTGAATAAGTTGAAAAGT
GAGAAACAGATACACGATATCCAAAGAACTACTTATCCACAATCTGGTTG
TCTTGAAGAAGGCATTGGGAGGTTAAATTTAAGTCAATCCATTAACACCA
AAAGTATGGATATTGCTGGATACATAAATATATTGCACAACACCATAAGT
GTTTTAAAACATAACTTGTCAAGGAGTCTTACTTATTTACGgattgtttc
aaaaacaaactCATTGAGATTAGACACCTTGCCAAAGAAAGATGACCTGC
TATATGACTCTGGTATTGTCAATATGGAACCAAACAATGATGACCAGCAA
GTGAATTTCAATATCCAAATGGCAGCTGGCAATCAAGACCAACACTACCC
TGATCAATCAAATGCAGAACCAAATACTCACCATACTATTCACAAAGTTA
ATAGCAGCCCTGAACTTTATCCATCTCTTCTTCAGAATCTACAAATGCAG
CAAACAAAAACTTATCTGAATTCGAATCATGGCCCTGTGAACCAATACAA
TGAGAACTTACCCATAGCTCCAGTTCGTCCACCAAGAAGGATACCTCTTT
ATGAAGAATACAGTAGTGATTGAATGGGTGACAGacttaaagaaaataat
aatagtATTCCTGGTAAATCAGGAGCTGCGCATGCATGGAACATAGcttT
TAACGATTTGAAAAGGAGATTTTGGCAGAGCCAGACAGACAATCAAAATC
TCCACGCTGAAGTGAAACAACTAAAGGACTACATATCGTATTTGGTGAAG
CAGAATCGTCATTTGAACAGCTTGCTTGCATCCAAAAATCTATCCCTTAC
CAAAATGGAGGAGAATCAAAAAACACTACGCGACCAAGAGAAGAAACAAG
ACCAGTACCTTAAAGATGTGTCCTCAAAGATTGAAGATTTGAATGCCGAA
ATCAGTTTGTATCAAAAAGAAAGATCTAAAGTTATTAATGAGAACCAAAA
CTTTAGATCTACAATAGAGCAATTGTACAAAGACAAGAAACAGattgaaa
atgaactggaaaatctgaaaaacattCCAGAAATTTCCATAAGCCCAACC
ACTTCTACTGCAACAATTACAAAAAATGAAGTCAACAAGGAGTTTGAAGA
CCTTTTATCTGAAAATAAACATTTGAAGACCAGCATTCACTGGATGAGTG
ATGAATTGAATAAGTTGAAAAGTGAGAAACAGATACACGATATCCAAAGA
ACTACTTATCCACAATCTGGTTGTCTTGAAGAAGGCATTGGGAGGTTAAA
TTTAAGTCAATCCATTAACACCAAAAGTATGGATATTGCTGGATACATAA
ATATATTGCACAACACCATAAGTGTTTTAAAACATAACTTGTCAAGGAGT
CTTACTTATTTACGgattgtttcaaaaacaaactCATTGAGATTAGACAC
CTTGCCAAAGAAAGATGACCTGCTATATGACTCTGGTATTGTCAATATGG
AACCAAACAATGATGACCAGCAAGTGAATTTCAATATCCAAATGGCAGCT
GGCAATCAAGACCAACACTACCCTGATCAATCAAATGCAGAACCAAATAC
TCACCATACTATTCACAAAGTTAATAGCAGCCCTGAACTTTATCCATCTC
TTCTTCAGAATCTACAAATGCAGCAAACAAAAACTTATCTGAATTCGAAT
CATGGCCCTGTGAACCAATACAATGAGAACTTACCCATAGCTCCAGTTCG
TCCACCAAGAAGGATACCTCTTTATGAAGAATACAGTAGTGATTGAATGG
GTGACAGacttaaagaaaataataatagtATTCCTGGTAAATCAGGAGCT
GCGCATGCATGGAACATAGcttTTAACGATTTGAAAAGGAGATTTTGGCA
GAGCCAGACAGACAATCAAAATCTCCACGCTGAAGTGAAACAACTAAAGG
ACTACATATCGTATTTGGTGAAGCAGAATCGTCATTTGAACAGCTTGCTT
GCATCCAAAAATCTATCCCTTACCAAAATGGAGGAGAATCAAAAAACACT
ACGCGACCAAGAGAAGAAACAAGACCAGTACCTTAAAGATGTGTCCTCAA
AGATTGAAGATTTGAATGCCGAAATCAGTTTGTATCAAAAAGAAAGATCT
AAAGTTATTAATGAGAACCAAAACTTTAGATCTACAATAGAGCAATTGTA
CAAAGACAAGAAACAGattgaaaatgaactggaaaatctgaaaaacattC
CAGAAATTTCCATAAGCCCAACCACTTCTACTGCAACAATTACAAAAAAT
GAAGTCAACAAGGAGTTTGAAGACCTTTTATCTGAAAATAAACATTTGAA
GACCAGCATTCACTGGATGAGTGATGAATTGAATAAGTTGAAAAGTGAGA
AACAGATACACGATATCCAAAGAACTACTTATCCACAATCTGGTTGTCTT
GAAGAAGGCATTGGGAGGTTAAATTTAAGTCAATCCATTAACACCAAAAG
TATGGATATTGCTGGATACATAAATATATTGCACAACACCATAAGTGTTT
TAAAACATAACTTGTCAAGGAGTCTTACTTATTTACGgattgtttcaaaa
acaaactCATTGAGATTAGACACCTTGCCAAAGAAAGATGACCTGCTATA
TGACTCTGGTATTGTCAATATGGAACCAAACAATGATGACCAGCAAGTGA
ATTTCAATATCCAAATGGCAGCTGGCAATCAAGACCAACACTACCCTGAT
CAATCAAATGCAGAACCAAATACTCACCATACTATTCACAAAGTTAATAG
CAGCCCTGAACTTTATCCATCTCTTCTTCAGAATCTACAAATGCAGCAAA
CAAAAACTTATCTGAATTCGAATCATGGCCCTGTGAACCAATACAATGAG
AACTTACCCATAGCTCCAGTTCGTCCACCAAGAAGGATACCTCTTTATGA
AGAATACAGTAGTGATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008043XLOC_008043Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014363-proteinTCONS_00014363-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014363-exon-sc0000187-1491911889:147375..147450TCONS_00014363-exon-sc0000187-1491911889:147375..147450Clytia hemisphaericaexon
TCONS_00014363-exon-sc0000187-1510915933:147375..147450TCONS_00014363-exon-sc0000187-1510915933:147375..147450Clytia hemisphaericaexon
TCONS_00014363-exon-sc0000187-1575043694:147375..147450TCONS_00014363-exon-sc0000187-1575043694:147375..147450Clytia hemisphaericaexon
TCONS_00014363-exon-sc0000187-1491911889:155978..156097TCONS_00014363-exon-sc0000187-1491911889:155978..156097Clytia hemisphaericaexon
TCONS_00014363-exon-sc0000187-1510915933:155978..156097TCONS_00014363-exon-sc0000187-1510915933:155978..156097Clytia hemisphaericaexon
TCONS_00014363-exon-sc0000187-1575043694:155978..156097TCONS_00014363-exon-sc0000187-1575043694:155978..156097Clytia hemisphaericaexon
TCONS_00014363-exon-sc0000187-1491911889:156329..156675TCONS_00014363-exon-sc0000187-1491911889:156329..156675Clytia hemisphaericaexon
TCONS_00014363-exon-sc0000187-1510915933:156329..156675TCONS_00014363-exon-sc0000187-1510915933:156329..156675Clytia hemisphaericaexon
TCONS_00014363-exon-sc0000187-1575043694:156329..156675TCONS_00014363-exon-sc0000187-1575043694:156329..156675Clytia hemisphaericaexon
TCONS_00014363-exon-sc0000187-1491911889:156969..158432TCONS_00014363-exon-sc0000187-1491911889:156969..158432Clytia hemisphaericaexon
TCONS_00014363-exon-sc0000187-1510915933:156969..158432TCONS_00014363-exon-sc0000187-1510915933:156969..158432Clytia hemisphaericaexon
TCONS_00014363-exon-sc0000187-1575043694:156969..158432TCONS_00014363-exon-sc0000187-1575043694:156969..158432Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000187supercontigsc0000187:147375..158432 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.0177	20.8681	5.7025	3.09498	33.2056	23.7505	22.7689	23.241	13.2547	15.6666	11.5579	9.28867	9.07159	6.50112	7.20741	8.27225	10.3889	10.9044	7.37127	8.06815	8.71693	8.18954	29.0636	28.1664	21.2772	21.7709	10.0375	7.2787	24.7344	25.5146
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014363 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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