TCONS_00014229 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014229
Unique NameTCONS_00014229
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2903

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014229 ID=TCONS_00014229|Name=TCONS_00014229|organism=Clytia hemisphaerica|type=transcript|length=2903bp
ATTTTGATTGGTGCATACGACACAATTAGTGAGGATTTTCTCTGCTGACA
TTTTCTAGTTTTGTCGATGCTGGCTTAAGCATTTGTATGCATTTTTTAGT
GTTTATAATTGATAATTGTACTCTCTACGGGTCTACAGACTTTACTAGTT
TGGAAAGCTCCATACAAAATAACATATCAAGGCTTAAACCTACCAAGAGG
AAAACTCATAATTGAAAAGGGatgtgtattttgtaatgtgCATTTTGATG
GGAtgaatattttggaaaatctgGGGTTAGAAGAATGCATGGGGTACCTG
TTGCCAAGGGCTCAAGTCGAAAtccaaaatgctcaaaaatatTTGGCTTT
CTAAtcggtttttattttagaaataaagccaaaaaaataattgatatttt
tattaaattttaactTTATATTTGGCAATTGAAAACACTATAACCAAGTA
GCAATCAACATGTTCCTTATCTCGAAAGAAAATGAAGCAAAGTTTAAGTT
TGAATTGAAACAAAGAATATTAGGACAAAATGAACAGCTTTTGATCCCTA
TCATGAGTACATTAACAAGCCCAATGACCAGAAAGATTGTTGACATTTAC
ACTGATAACTTGAATGGAGACAAAAGCACCTTTATTGCTTTAACCTATCC
TCAACCAGGAGAAATATTGAAACTGTTTGAAGGTAGGGATACAATTTCAA
ATGATGACTATATTGGTCTTgaagaacaattaaaaaaatgcaaaaaaatc
tttcaattctgGTCAGTGAATTATCAAAAGAACCTCGATCTTCATCTCAA
ATATATGCTTGAAGTTTACATTCACAGGTCTCCAATTCGTCACACTCCAA
CGGAACTGGTTGAAAACCTCTTAAATATTGCAGAAAAATCAACTTCAATG
GTAAACCACTTTAATATAGATTATTATTTCTTCAGAACTGTGACAGACCA
TACATCAGTTTACAATATGTTTGAAGAAACAACTGTTGACATATCTTTAA
ATGATCGCTACTCCATTAGACATATCCAAATGCAACACTTTGAATCAGGT
TTCAAAAACTGGGATGAACATGGGGAAATGGCAGGAAATCGTAAAGAGGT
GTTAAAGGTCAGCGTTTTCTTTGGTTTATATTTTGGAGCATTTACAAAGG
ACACAAACGAGCTTGCTGGTTGGATTGCATCAGTTTATCCTGGGGAAAGT
GGTGATCTTTTTGTACATCCTCGTCATCGTGCTAATGGCTTAGGAAATTC
CTTGATACTCTATTTAACAAACAGATCACACAAAGAAGGATTTTTCCTCT
CAACATATTATAAAAATCCAGAAAGATCTTTCAAACCGAAGATTGAAAGC
ACAACAAGGGGATTTGTTCCTTTTAGCTCTGCGTTTACAGTAAGACAGTA
GCAAGCTATTTGAATGTCAATTTTCATGTTATATGTTGAAAAGAATCCCC
ACATTTAAGCAAACCACTGGTATTCCTCAAAGCCTATCAACCCAGCCCAA
GAACATGCAATTTTTGACAACTATTTTTagtattcaatttcaattatgca
atttttgtactatttttcagattttttttttgtaatttaattaaTTCCAC
TAcagtgcttattttttttactaaGAGATTTTATTAGTGTTTATGTATTT
TAATATTTGATGCATTGTAGCTTTAGGCTCTATGACATAGCAACGATAGA
GTAATTTCTTTGTGTTAATTTGTACGTTTGGCAAAGAATGCTAGTTTCAT
TCATCTTCATTTATCATtcttaaatatttattttttaattacttATCAGA
TTGCTCttaattgaaaaatcttttaattttccaggaattacaaaaaaaag
agTATAATATTTCCTGAAGTAAAAAGATGTCTAATGATATATTGTATGCC
ACAGTTGCAAGGGGCACCACTGTGCTGGCAAGGTATGCCTCTTGCAGTGG
AAACTTTCAAGAAATCACAGATCATATCCTTTCAAAGATTGGACCAAGCG
ATGATAAAATGACATACACACAAACAGGGTACCTGTTTCATTACATTGTC
CAAAACAGAATAACGTATTTGTGTATTACAGAAGATgGATTTGATAGATC
CAAATCATTTGCATATCTTGGAGAAATTGTCAGAAGGTTCACCAAAACAT
ACCAGAATCGGGCCGATACTGCGCTACCCTATGCAATGCAGAGTGAATTT
TCACGTGTTTTAGCCAGTGAGATGCGACATTTCTCGAAAGGAGATTCTGG
CAAAATGCAGAGAGTACAGGAAGATTTGAGTGAATTGAAAGGGATCATGA
TCAATAATATTGATTCAATAGCACAACGAGGAGAAAAACTAGAGCTTCTT
GTTGAAAAGACTGATGACCTAAGTACTTCTgcCATGACTTTTAAGAAATC
AAGCAGAACTCTTGAGAGAACaatgtttatgaaaaatgtgaaaattacaG
TCGCCATCGTATGTGTTATATTGGTATGTCACTTCGCattcttttgaaat
atatttcaaataaCTATTTATCTGATTCTCGTTGcattttatctttgttt
ttggGCCTAAATCTGACAAGACTGATAACGGTTTGAAAATGCTAATTTTA
AAAAGGAAAGCTAATAAAAAGGCATCGTtaattaatttcttttattcGTT
ACAGgtatttattttaattattgtaTTTGCTTCATGTGGAACCAATTGGA
GTGATTGTGGCAAAAGCTAAAAGATAAAAGGTCAACTGGTTGCAATCTGG
ATTCTCTCAGATTGCTTATCAAGTTTTTAGTTGGTATCCAAAATTGCATA
TCTTNTATATTTTCCAACagtttctccatcttatttgcacgtcatgaaca
tttccaacaccagcaaactcaatgcagacccaagttctttgagcaactag
tct
Run BLAST on NCBI

protein sequence of TCONS_00014229-protein

>TCONS_00014229-protein ID=TCONS_00014229-protein|Name=TCONS_00014229-protein|organism=Clytia hemisphaerica|type=polypeptide|length=313bp
MFLISKENEAKFKFELKQRILGQNEQLLIPIMSTLTSPMTRKIVDIYTDN
LNGDKSTFIALTYPQPGEILKLFEGRDTISNDDYIGLEEQLKKCKKIFQF
WSVNYQKNLDLHLKYMLEVYIHRSPIRHTPTELVENLLNIAEKSTSMVNH
FNIDYYFFRTVTDHTSVYNMFEETTVDISLNDRYSIRHIQMQHFESGFKN
WDEHGEMAGNRKEVLKVSVFFGLYFGAFTKDTNELAGWIASVYPGESGDL
FVHPRHRANGLGNSLILYLTNRSHKEGFFLSTYYKNPERSFKPKIESTTR
GFVPFSSAFTVRQ
Run BLAST on NCBI

transcript from alignment at sc0000183:120268..126464-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014229 ID=TCONS_00014229|Name=TCONS_00014229|organism=Clytia hemisphaerica|type=transcript|length=6197bp|location=Sequence derived from alignment at sc0000183:120268..126464- (Clytia hemisphaerica)
ATTTTGATTGGTGCATACGACACAATTAGTGAGGATTTTCTCTGCTGACA
TTTTCTAGTTTTGTCGATGCTGGCTTAAGCATTTGTATGCATTTTTTAGT
GTTTATAATTGATAATTGTACTCTCTACGGGTCTACAGACTTTACTAGTT
TGGAAAGCTCCATACAAAATAACATATCAAGGCTTAAACCTACCAAGAGG
AAAACTCATAATTGAAAAGGGATGTGTATTTTGTAATGTGCATTTTGATG
GGATGAATATTTTGGAAAATCTGGGGTTAGAAGAATGCATGGGGTACCTG
TTGCCAAGGGCTCAAGTCGAAATCCAAAATGCTCAAAAATATTTGGCTTT
CTAATCGGTTTTTATTTTAGAAATAAAGCCAAAAAAATAATTGATATTTT
TATTAAATTTTAACTTTATATTTGGCAATTGAAAACACTATAACCAAGTA
GCAATCAACATGTTCCTTATCTCGAAAGAAAATGAAGCAAAGTTTAAGTT
TGAATTGAAACAAAGAATATTAGGACAAAATGAACAGCTTTTGATCCCTA
TCATGAGTACATTAACAAGCCCAATGACCAGAAAGATTGTTGACATTTAC
ACTGATAACTTGAATGGAGACAAAAGCACCTTTATTGCTTTAACCTATCC
TCAACCAGGAGAAATATTGAAACTGTTTGAAGGTAGGGATACAATTTCAA
ATGATGACTATATTGGTCTTGAAGAACAATTAAAAAAATGCAAAAAAATC
TTTCAATTCTGGTCAGTGAATTATCAAAAGAACCTCGATCTTCATCTCAA
ATATATGCTTGAAGTTTACATTCACAGGTCTCCAATTCGTCACACTCCAA
CGGAACTGGTTGAAAACCTCTTAAATATTGCAGAAAAATCAACTTCAATG
GTAAACCACTTTAATATAGATTATTATTTCTTCAGAACTGTGACAGACCA
TACATCAGTTTACAATATGTTTGAAGAAACAACTGTTGACATATCTTTAA
ATGATCGCTACTCCATTAGACATATCCAAATGCAACACTTTGAATCAGGT
TTCAAAAACTGGGATGAACATGGGGAAATGGCAGGAAATCGTAAAGAGGC
AGGGGGGGTCATGCAGTTATTATATAAACACTATGACAATTACTACCGTG
GTGGTATATAAACCAAAATTTGGGAAAACAGTTACTCCACCAGTGGACTA
ACTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTT
TTTTCTTCAATCAAGGCATGAAAGATATTTTAACAAACTTGGAAAATGAT
CGAGATATTTAACTCTTGAATGGTCGTTAATAAGACATACCCAGTGAAAT
GGTATCAAAAATGAGGAATTCAGTGAAAAAATTGCCAAATTTGGCATTTT
TGGGGGTGGTATACACCAATTTTGAGGGTAAAATCAGNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAGAGGTGTTAAAGGTC
AGCGTTTTCTTTGGTTTATATTTTGGAGCATTTACAAAGGACACAAACGA
GCTTGCTGGTTGGATTGCATCAGTTTATCCTGGGGAAAGTGGTGATCTTT
TTGTACATCCTCGTCATCGTGCTAATGGCTTAGGAAATTCCTTGATACTC
TATTTAACAAACAGATCACACAAAGAAGGATTTTTCCTCTCAACATATTA
TAAAAATCCAGAAAGATCTTTCAAACCGAAGATTGAAAGCACAACAAGGG
GATTTGTTCCTTTTAGCTCTGCGTTTACAGTAAGACAGTAGCAAGCTATT
TGAATGTCAATTTTCATGTTATATGTTGAAAAGAATCCCCACATTTAAGC
AAACCACTGGTATTCCTCAAAGCCTATCAACCCAGCCCAAGAACATNGAA
TCCACACATTTAAGCAAACCACTGGTGTTCCTCAAAGCCTATCAACCCAA
CCCAAGAACATGCAATTTTTGACAACTATTTTTAGTATTCAATTTCAATT
ATGCAATTTTTGTACTATTTTTCAGATTTTTTTTTTGTAATTTAATTAAT
TCCACTACAGTGCTTATTTTTTTTACTAAGAGATTTTATTAGTGTTTATG
TATTTTAATATTTGATGCATTGTAGCTTTAGGCTCTATGACATAGCAACG
ATAGAGTAATTTCTTTGTGTTAATTTGTACGTTTGGCAAAGAATGCTAGT
TTCATTCATCTTCATTTATCATTCTTAAATATTTATTTTTTAATTACTTA
TCAGATTGCTCTTAATTGAAAAATCTTTTAATTTTCCAGGAATTACAAAA
AAAAGAGTATAATATTTCCTGAAGTAAAAAGATGTCTAATGATATATTGT
ATGCCACAGTTGCAAGGGGCACCACTGTGCTGGCAAGGTATGCCTCTTGC
AGTGGAAACTTTCAAGAAATCACAGATCATATCCTTTCAAAGATTGGACC
AAGCGATGATAAAATGACATACACACAAACAGGGTTAATATTATTATTAT
ATACCTTTTAAGTTTTTAATTCCCAATTATTCTACCAAAAAAAAGCCTAC
CATTCATCTTTCACAGAATTGTTTCGAATTTGAATTACTATATACTCTTG
TCTCTCGCATAGAAGCGGGGGGGATGGAATTAGAGGGGGGGGGGTAATTT
GAAGACAGAATTTTTTTTAACTGATATCAATTTCAACAACAAAATTGAAA
CTTTAGCAAATGAACACATAAAATAAGAACCAATATCCTAACAAAAAGGA
AAATTTTAACAAGTTTAAGGCAGGGGGACGTCTATTCAGGAGACAAGAGT
ACCTTTTTAAAGTTTTAAACCCCAACAATTCTACCAAGAAGAAAGCCTAT
CATTCACCTTTCACAGAAGTGTTTTTAATTTGAAATCAAAAACTTGTTTC
CGTAGAATTATTTTCTCCTTGAAAATTATTGTTTATTTCTAATTTCTTCT
TATCAAATTATTCTTTTTAGGTACCTGTTTCATTACATTGTCCAAAACAG
AATAACGTATTTGTGTATTACAGAAGATGTAAGTAATGAACTCTTTACTG
CTCCAGCTGAACTTATCTATGTTCATGTTCTTCCCGAGGGTACAAAGAAT
AATTTTTTCATGAAATACCAGCTTACTGGCCAAAAGTTTTCCAAATACTG
GTTTAAAATGTTATGACAAGGGGCCTGGAATTACCGTGATATTTTTTCCC
GACTTATTTTTCTCCGAGTTATTTTTCCAAGTATTTTTGCATGTGACGTC
AAAATTTCAGTTTTGTGATGTCATTATGACGTCATGTCAGTGATAACTCG
AGGTTTTTATGAGCCTTTAATTTTTCGAGTTATATTTGGTGTTTTAAACT
CGGTTTTTGGACCTGGAGTAAAACTGTTTTTTTGGCATTTTCTCGAGATG
ATTTTTTGCTCAAAGATGCGTATTAACAATGCATGAGAAAAACCGAGTTA
AGATTTGTGTGATGACATCATTATGACGTCACAAAACTGAAAATATGACG
TCACATGCAAAATAACTCAATAAAATAACTCAGGAATTCCAGGCCCCTTA
TGACAAGTACCGAAAGTTTAGCCTTTCAAAACCACCAGTTACTTTCCCTC
AAATACAGAAATACCAGACTCTTGGAAGCCCCCTGTTATTGTTAAACCAG
GTTAAACACAAAAGATATTGAGTACTTTGTTCACTAAAACTTTCTTTTAA
TGTTTTTATGTTTAGGGATTTGATAGATCCAAATCATTTGCATATCTTGG
AGAAATTGTCAGAAGGTATCTAATGTTTTACTACTTCATGGTTGTCCTTA
AGGGGGAGGGGAGTATTTTGGGCATATTTATCTGAGGCTGAGATACAAAC
GATTCTATTACAAGGAATTGTAATCATCTTATTTTGAAGATAAAGGGAAT
CTATCTATCAGATCACAATGTAAATTTTTTCCGTTTTCAAATTCAAAAGC
AAAAAAGCTTTATTGCTTTCAAATTCAACTTGTCTTGTCTTTTGCTTTTT
ATCATGAAACTTAATCTTTTACTTAATCAGGTTCACCAAAACATACCAGA
ATCGGGCCGATACTGCGCTACCCTATGCAATGCAGAGTGAATTTTCACGT
GTTTTAGCCAGTGAGATGGTACGTATTTTCTTGTTTTTGAATATGTTTCA
CTCAAAATATCTATTCATGGTTTACTGTCTTTTATTTGAACTGGATAATT
TTTTATATCATTTGAGCAGCAATGGTCACCTAAATCCAAAAAATGAACGG
ACCCATACTGTACATAATTTTTGAGCCTACCTCCGGGTACACCGGTGAAG
GTCCTATAAATTAACCGATGTCCGTCCGTTTGTCCGTTCGTCCGTCCGTC
TGTTACCAGCTTTTCTCAGGATTGGCTAATTAGTTTTTTCTGATTTTTGG
CACATTGATGCAAAATGGCAATGCCCAAAATGTGACAGAGCCCGATTTTC
GAAAAATATGCCGGAAAAACTGTTTTTTTGGCATTTTCTCGAGATTTTAT
CATTAGTCTTTTCTGATTTTTTGCACGAAGATGTGTATTAACAATGCCCA
AAACATAGCCGAGTTTGATTTTTGAGAAATTTTTTTTTCCTGCCGAAAAT
ACCGGAAATTGCCGTTTTTGCAGATTTTTGTTGGATTTTTTCTTATTTTT
CTATGTTTTTCACACAAAAACATTATTGATAACAGTGCTCATCATCAAGC
ATGATTCAATTTGACTGATTTTTTTCATTTTTCTCCTCGCATTGCTATCT
AACTTTCATCATCAGGTAGGTCCATTCAGCATCTAGCTTGTTTTCATTTA
AGCGACATTTCTCGAAAGGAGATTCTGGCAAAATGCAGAGAGTACAGGAA
GATTTGAGTGAATTGAAAGGGATCATGATCAATAATATTGGTAACAGCTT
TCTTTTCTTTGTTGTACAGCTTTACGTAATACTTTATTTTCTTGAAATTA
ATTTGAAATATGCTCGGTTATGATCAGCAATGGACAAAATTGTGTTCTGT
GTATTAATAGAAGCTTTGACATCTTGGTAAATCTGGTAAAAGAACTGTTT
TCATGAAGCTGTATGTATCCATTTATGTACGTATATCACATGGTTTGATA
AATTTACCACACCTACACATTTCTTTTCCTCTCACCAGATTCAATAGCAC
AACGAGGAGAAAAACTAGAGCTTCTTGTTGAAAAGACTGATGACCTAAGT
ACTTCTGTAAGTGAATGAGGTTTATCAAAGTCTAGTATTTGTGTGTGTGA
TGCCTTTAACCCTAAACTGTTATCTAGAAATTTATTACAATTCGATCACC
ATTAAACAAATTTTCTTATTTTAGGCCATGACTTTTAAGAAATCAAGCAG
AACTCTTGAGAGAACAATGTTTATGAAAAATGTGAAAATTACAGTCGCCA
TCGTATGTGTTATATTGGTATGTCACTTCGCATTCTTTTGAAATATATTT
CAAATAACTATTTATCTGATTCTCGTTGCATTTTATCTTTGTTTTTGGGC
CTAAATCTGACAAGACTGATAACGGTTTGAAAATGCTAATTTTAAAAAGG
AAAGCTAATAAAAAGGCATCGTTAATTAATTTCTTTTATTCGTTACAGGT
ATTTATTTTAATTATTGTATTTGCTTCATGTGGAACCAATTGGAGTGATT
GTGGCAAAAGCTAAAAGATAAAAGGTCAACTGGTTGCAATCTGGATTCTC
TCAGATTGCTTATCAAGTTTTTAGTTGGTATCCAAAATTGCATATCTTNT
ATATTTTCCAACAGTTTCTCCATCTTATTTGCACGTCATGAACATTTCCA
ACACCAGCAAACTCAATGCAGACCCAAGTTCTTTGAGCAACTAGTCT

Coding sequence (CDS) from alignment at sc0000183:120268..126464-

>TCONS_00014229 ID=TCONS_00014229|Name=TCONS_00014229|organism=Clytia hemisphaerica|type=CDS|length=1884bp|location=Sequence derived from alignment at sc0000183:120268..126464- (Clytia hemisphaerica)
GTGTTAAAGGTCAGCGTTTTCTTTGGTTTATATTTTGGAGCATTTACAAA
GGACACAAACGAGCTTGCTGGTTGGATTGCATCAGTTTATCCTGGGGAAA
GTGGTGATCTTTTTGTACATCCTCGTCATCGTGCTAATGGCTTAGGAAAT
TCCTTGATACTCTATTTAACAAACAGATCACACAAAGAAGGATTTTTCCT
CTCAACATATTATAAAAATCCAGAAAGATCTTTCAAACCGAAGATTGAAA
GCACAACAAGGGGATTTGTTCCTTTTAGCTCTGCGTTTACAGTAAGACAG
TAGATGTTCCTTATCTCGAAAGAAAATGAAGCAAAGTTTAAGTTTGAATT
GAAACAAAGAATATTAGGACAAAATGAACAGCTTTTGATCCCTATCATGA
GTACATTAACAAGCCCAATGACCAGAAAGATTGTTGACATTTACACTGAT
AACTTGAATGGAGACAAAAGCACCTTTATTGCTTTAACCTATCCTCAACC
AGGAGAAATATTGAAACTGTTTGAAGGTAGGGATACAATTTCAAATGATG
ACTATATTGGTCTTGAAGAACAATTAAAAAAATGCAAAAAAATCTTTCAA
TTCTGGTCAGTGAATTATCAAAAGAACCTCGATCTTCATCTCAAATATAT
GCTTGAAGTTTACATTCACAGGTCTCCAATTCGTCACACTCCAACGGAAC
TGGTTGAAAACCTCTTAAATATTGCAGAAAAATCAACTTCAATGGTAAAC
CACTTTAATATAGATTATTATTTCTTCAGAACTGTGACAGACCATACATC
AGTTTACAATATGTTTGAAGAAACAACTGTTGACATATCTTTAAATGATC
GCTACTCCATTAGACATATCCAAATGCAACACTTTGAATCAGGTTTCAAA
AACTGGGATGAACATGGGGAAATGGCAGGAAATCGTAAAGAGGTGTTAAA
GGTCAGCGTTTTCTTTGGTTTATATTTTGGAGCATTTACAAAGGACACAA
ACGAGCTTGCTGGTTGGATTGCATCAGTTTATCCTGGGGAAAGTGGTGAT
CTTTTTGTACATCCTCGTCATCGTGCTAATGGCTTAGGAAATTCCTTGAT
ACTCTATTTAACAAACAGATCACACAAAGAAGGATTTTTCCTCTCAACAT
ATTATAAAAATCCAGAAAGATCTTTCAAACCGAAGATTGAAAGCACAACA
AGGGGATTTGTTCCTTTTAGCTCTGCGTTTACAGTAAGACAGTAGATGTT
CCTTATCTCGAAAGAAAATGAAGCAAAGTTTAAGTTTGAATTGAAACAAA
GAATATTAGGACAAAATGAACAGCTTTTGATCCCTATCATGAGTACATTA
ACAAGCCCAATGACCAGAAAGATTGTTGACATTTACACTGATAACTTGAA
TGGAGACAAAAGCACCTTTATTGCTTTAACCTATCCTCAACCAGGAGAAA
TATTGAAACTGTTTGAAGGTAGGGATACAATTTCAAATGATGACTATATT
GGTCTTGAAGAACAATTAAAAAAATGCAAAAAAATCTTTCAATTCTGGTC
AGTGAATTATCAAAAGAACCTCGATCTTCATCTCAAATATATGCTTGAAG
TTTACATTCACAGGTCTCCAATTCGTCACACTCCAACGGAACTGGTTGAA
AACCTCTTAAATATTGCAGAAAAATCAACTTCAATGGTAAACCACTTTAA
TATAGATTATTATTTCTTCAGAACTGTGACAGACCATACATCAGTTTACA
ATATGTTTGAAGAAACAACTGTTGACATATCTTTAAATGATCGCTACTCC
ATTAGACATATCCAAATGCAACACTTTGAATCAGGTTTCAAAAACTGGGA
TGAACATGGGGAAATGGCAGGAAATCGTAAAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007958XLOC_007958Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014229-proteinTCONS_00014229-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014229-exon-sc0000183-1575043694:125367..126464TCONS_00014229-exon-sc0000183-1575043694:125367..126464Clytia hemisphaericaexon
TCONS_00014229-exon-sc0000183-1575043694:124221..124626TCONS_00014229-exon-sc0000183-1575043694:124221..124626Clytia hemisphaericaexon
TCONS_00014229-exon-sc0000183-1575043694:123632..124155TCONS_00014229-exon-sc0000183-1575043694:123632..124155Clytia hemisphaericaexon
TCONS_00014229-exon-sc0000183-1575043694:123087..123144TCONS_00014229-exon-sc0000183-1575043694:123087..123144Clytia hemisphaericaexon
TCONS_00014229-exon-sc0000183-1575043694:122350..122399TCONS_00014229-exon-sc0000183-1575043694:122350..122399Clytia hemisphaericaexon
TCONS_00014229-exon-sc0000183-1575043694:121997..122084TCONS_00014229-exon-sc0000183-1575043694:121997..122084Clytia hemisphaericaexon
TCONS_00014229-exon-sc0000183-1575043694:121225..121312TCONS_00014229-exon-sc0000183-1575043694:121225..121312Clytia hemisphaericaexon
TCONS_00014229-exon-sc0000183-1575043694:120909..120976TCONS_00014229-exon-sc0000183-1575043694:120909..120976Clytia hemisphaericaexon
TCONS_00014229-exon-sc0000183-1575043694:120268..120790TCONS_00014229-exon-sc0000183-1575043694:120268..120790Clytia hemisphaericaexon
TCONS_00014229-exon-sc0000183-1510915933:125367..126464TCONS_00014229-exon-sc0000183-1510915933:125367..126464Clytia hemisphaericaexon
TCONS_00014229-exon-sc0000183-1510915933:124221..124626TCONS_00014229-exon-sc0000183-1510915933:124221..124626Clytia hemisphaericaexon
TCONS_00014229-exon-sc0000183-1510915933:123632..124155TCONS_00014229-exon-sc0000183-1510915933:123632..124155Clytia hemisphaericaexon
TCONS_00014229-exon-sc0000183-1510915933:123087..123144TCONS_00014229-exon-sc0000183-1510915933:123087..123144Clytia hemisphaericaexon
TCONS_00014229-exon-sc0000183-1510915933:122350..122399TCONS_00014229-exon-sc0000183-1510915933:122350..122399Clytia hemisphaericaexon
TCONS_00014229-exon-sc0000183-1510915933:121997..122084TCONS_00014229-exon-sc0000183-1510915933:121997..122084Clytia hemisphaericaexon
TCONS_00014229-exon-sc0000183-1510915933:121225..121312TCONS_00014229-exon-sc0000183-1510915933:121225..121312Clytia hemisphaericaexon
TCONS_00014229-exon-sc0000183-1510915933:120909..120976TCONS_00014229-exon-sc0000183-1510915933:120909..120976Clytia hemisphaericaexon
TCONS_00014229-exon-sc0000183-1510915933:120268..120790TCONS_00014229-exon-sc0000183-1510915933:120268..120790Clytia hemisphaericaexon
TCONS_00014229-exon-sc0000183-1491911889:125367..126464TCONS_00014229-exon-sc0000183-1491911889:125367..126464Clytia hemisphaericaexon
TCONS_00014229-exon-sc0000183-1491911889:124221..124626TCONS_00014229-exon-sc0000183-1491911889:124221..124626Clytia hemisphaericaexon
TCONS_00014229-exon-sc0000183-1491911889:123632..124155TCONS_00014229-exon-sc0000183-1491911889:123632..124155Clytia hemisphaericaexon
TCONS_00014229-exon-sc0000183-1491911889:123087..123144TCONS_00014229-exon-sc0000183-1491911889:123087..123144Clytia hemisphaericaexon
TCONS_00014229-exon-sc0000183-1491911889:122350..122399TCONS_00014229-exon-sc0000183-1491911889:122350..122399Clytia hemisphaericaexon
TCONS_00014229-exon-sc0000183-1491911889:121997..122084TCONS_00014229-exon-sc0000183-1491911889:121997..122084Clytia hemisphaericaexon
TCONS_00014229-exon-sc0000183-1491911889:121225..121312TCONS_00014229-exon-sc0000183-1491911889:121225..121312Clytia hemisphaericaexon
TCONS_00014229-exon-sc0000183-1491911889:120909..120976TCONS_00014229-exon-sc0000183-1491911889:120909..120976Clytia hemisphaericaexon
TCONS_00014229-exon-sc0000183-1491911889:120268..120790TCONS_00014229-exon-sc0000183-1491911889:120268..120790Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000183supercontigsc0000183:120268..126464 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.5124	9.98596	18.7264	21.5719	11.7597	7.91654	9.24532	9.8883	5.78548	5.36649	4.40129	3.39429	3.92998	4.57834	4.82514	5.37996	4.95993	4.82169	2.99218	3.84918	3.30922	3.49867	10.1878	10.6414	4.6814	5.37647	3.57536	2.3668	5.46259	6.87581
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013653FR47
IPR000182GNAT_dom
IPR016181Acyl_CoA_acyltransferase
Vocabulary: Molecular Function
TermDefinition
GO:0016747transferase activity, transferring acyl groups other than amino-acyl groups
GO:0008080N-acetyltransferase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008080 N-acetyltransferase activity
molecular_function GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups
Blast
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BLAST of TCONS_00014229 vs. Swiss-Prot (Human)
Match: VAMP7 (Vesicle-associated membrane protein 7 OS=Homo sapiens GN=VAMP7 PE=1 SV=3)

HSP 1 Score: 229.18 bits (583), Expect = 2.315e-68
Identity = 106/188 (56.38%), Postives = 144/188 (76.60%), Query Frame = 2 
Query: 1889 ILYATVARGTTVLARYASCSGNFQEITDHILSKIGPSDDKMTYTQTGYLFHYIVQNRITYLCITEDGFDRSKSFAYLGEIVRRFTKTYQNRADTALPYAMQSEFSRVLASEMRHFSKGDS-GKMQRVQEDLSELKGIMINNIDSIAQRGEKLELLVEKTDDLSTSAMTFKKSSRTLERTMFMKNVKIT 2449
            IL+A VARGTT+LA++A C GNF E+T+ IL+KI   ++K+TY+   YLFHYI Q+RI YLCIT+D F+RS++F +L EI +RF  TY +RA TALPYAM SEFS VLA++++H S+     K+   Q  + ELKGIM+ NID +AQRGE+LELL++KT++L  S++TFK +SR L R M MKN+K+T
Sbjct:    3 ILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLKLT 190
The following BLAST results are available for this feature:
BLAST of TCONS_00014229 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VAMP72.315e-6856.38Vesicle-associated membrane protein 7 OS=Homo sapi... [more]
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