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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014154 ID=TCONS_00014154|Name=TCONS_00014154|organism=Clytia hemisphaerica|type=transcript|length=1515bp
GCTGACATTACATTTACCATAAAGTTGAGCGTTACTTATTGCATATCGAT
AGTCGTTGGCATCTGGATTCACGAATTTGAATCCACCACGAATCATTCGA
CGGAAAAGATTTCGATACACAGCATTCACGCGATCAAGTTGTTGTTGAGT
CAGATTCCAGTTCTGACATGCGTATACTATGTGCCTACTTTGCACAAAAC
TGTTCAAGAATAATATGCGAGTTTTCAGATTAATTCGAAAATTTGACAAT
TGCTGAAATTTAGCGTTGGCAAGTTGGATACGGTGGTTTGTCTCCTTTTC
ACCAGTGTTTGGTTGGTCTTACAATCGAGATAGGCTCCAAATTATTTGAA
TTCGGATACGTTGGATAGTCAGCATTCGTTTGATTCGACAATTGATTGTG
GATATGTAGAGTTGACTGGATGATTAAGAATTATCGTCTGTCTTTTGAAT
ATTGACATAACGAAATTCGTAATTGCGTAATTGCGTAATTGACGTAATGA
CGCAATGTTCTCAGGTGGGAGTTACCCCAAGCATTCGGTATATCTAGGTT
TTCCCACAATTTGTTGGTGATTCTTTATATTACTTGCATCACCATCGGAT
GAGGATGATTTTTAGTAGCTCGGCTTCAACATCATTGCTAGCTTTGTTGT
TTTGGAGGAGATGGATGTGTTTCTCTATTTCATTATTGTCTGTAGGTGGA
AGGTCATTGATGATTGCACTgtcagaaattttttgaagacaaGGAAGAca
attaggacaaaaaagggaactttcaaaaacattttcccaaaaattaataa
gcagggggagggggttggaataagaatggcCTGGgtaaaagattttcgaa
aaattgattaGCAGGGGATGGCTATTAGGTAGTACCCGATAGTAGTCATT
GAAGCGACTTCACATTCAAGTTGGGACTCGAGAAGCATTCACACTATCAT
TTGAAGTTACAGCTTCTTCATAAACGGTGCATTTCCAATGTGGATAATGC
AAAGACATTAGATTCAACCAAGGTCACTGTCGGATGGGCAACAAACAACA
TTTTAGATTAGAATTAATTGTTGCGACTTTCTTctaattttggccatttt
tcttttttaaaggtaTAAAATTCTGCGAGTCATTCCATGTAAATATACTA
AACCCTTTAGTATTAATAagtatttttatataatttcaCATTAGttgaaa
acttttgttttttttttggtgtttttctttttcattcattttttaggACT
GTTGTTTTTGGTATACGTCGGGAAAATGTATTCGTCTTTCCCTTATTGGG
TGTAGTTTTTGCTTTTTTACTGGATTATctcttcatttttaaaattgttc
ttgcgttttgattaaaatttgacGTTGTTATACAGTAAGTAACCATATTT
CATTAACAGTATATTTTCTACTTATTATTGTAATGTAAGAAAAAAGTAAT
TCACTATATCTGGAAATTTAGTATGAAAAATGCTTAAATTAATTCCAATG
TCTAGAGTGGGGCTA Run BLAST on NCBI transcript from alignment at sc0000181:84898..86412 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014154 ID=TCONS_00014154|Name=TCONS_00014154|organism=Clytia hemisphaerica|type=transcript|length=1515bp|location=Sequence derived from alignment at sc0000181:84898..86412 (Clytia hemisphaerica)
TAGCCCCACTCTAGACATTGGAATTAATTTAAGCATTTTTCATACTAAAT
TTCCAGATATAGTGAATTACTTTTTTCTTACATTACAATAATAAGTAGAA
AATATACTGTTAATGAAATATGGTTACTTACTGTATAACAACgtcaaatt
ttaatcaaaacgcaagaacaattttaaaaatgaagagATAATCCAGTAAA
AAAGCAAAAACTACACCCAATAAGGGAAAGACGAATACATTTTCCCGACG
TATACCAAAAACAACAGTcctaaaaaatgaatgaaaaagaaaaacaccaa
aaaaaaaacaaaagttttcaaCTAATGtgaaattatataaaaatactTAT
TAATACTAAAGGGTTTAGTATATTTACATGGAATGACTCGCAGAATTTTA
tacctttaaaaaagaaaaatggccaaaattagAAGAAAGTCGCAACAATT
AATTCTAATCTAAAATGTTGTTTGTTGCCCATCCGACAGTGACCTTGGTT
GAATCTAATGTCTTTGCATTATCCACATTGGAAATGCACCGTTTATGAAG
AAGCTGTAACTTCAAATGATAGTGTGAATGCTTCTCGAGTCCCAACTTGA
ATGTGAAGTCGCTTCAATGACTACTATCGGGTACTACCTAATAGCCATCC
CCTGCtaatcaatttttcgaaaatcttttacCCAGgccattcttattcca
accccctccccctgcttattaatttttgggaaaatgtttttgaaagttcc
cttttttgtcctaattgTCTTCCttgtcttcaaaaaatttctgacAGTGC
AATCATCAATGACCTTCCACCTACAGACAATAATGAAATAGAGAAACACA
TCCATCTCCTCCAAAACAACAAAGCTAGCAATGATGTTGAAGCCGAGCTA
CTAAAAATCATCCTCATCCGATGGTGATGCAAGTAATATAAAGAATCACC
AACAAATTGTGGGAAAACCTAGATATACCGAATGCTTGGGGTAACTCCCA
CCTGAGAACATTGCGTCATTACGTCAATTACGCAATTACGCAATTACGAA
TTTCGTTATGTCAATATTCAAAAGACAGACGATAATTCTTAATCATCCAG
TCAACTCTACATATCCACAATCAATTGTCGAATCAAACGAATGCTGACTA
TCCAACGTATCCGAATTCAAATAATTTGGAGCCTATCTCGATTGTAAGAC
CAACCAAACACTGGTGAAAAGGAGACAAACCACCGTATCCAACTTGCCAA
CGCTAAATTTCAGCAATTGTCAAATTTTCGAATTAATCTGAAAACTCGCA
TATTATTCTTGAACAGTTTTGTGCAAAGTAGGCACATAGTATACGCATGT
CAGAACTGGAATCTGACTCAACAACAACTTGATCGCGTGAATGCTGTGTA
TCGAAATCTTTTCCGTCGAATGATTCGTGGTGGATTCAAATTCGTGAATC
CAGATGCCAACGACTATCGATATGCAATAAGTAACGCTCAACTTTATGGT
AAATGTAATGTCAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014154-exon-sc0000181-1491911889:84898..86412 | TCONS_00014154-exon-sc0000181-1491911889:84898..86412 | Clytia hemisphaerica | exon |
| TCONS_00014154-exon-sc0000181-1510915933:84898..86412 | TCONS_00014154-exon-sc0000181-1510915933:84898..86412 | Clytia hemisphaerica | exon |
| TCONS_00014154-exon-sc0000181-1575043694:84898..86412 | TCONS_00014154-exon-sc0000181-1575043694:84898..86412 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000181 | supercontig | sc0000181:84898..86412 . |
Blast
The following BLAST results are available for this feature:
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