TCONS_00013604 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013604
Unique NameTCONS_00013604
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1518

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013604 ID=TCONS_00013604|Name=TCONS_00013604|organism=Clytia hemisphaerica|type=transcript|length=1518bp
GATTAATATAATtaataaagaaataaagaaaaaagcaaaatggcagaaaa
tactacaaaaagagagaaaattgcCCAGATGTCTTCTGAGGTTGTGGATA
GTAATCCATATAgtCGTTTGATGGCTCTGAAAAGGATGGGAATAGTTGAT
AATTATGAGCGTATTCGTGATTACAGCATTGCAGTAGTTGGGATTGGAGG
TGTGGGCAGTGTTACTTCAGAAATGTTGACCAGGTGTGGTATAGGAAAGC
TAATTATGTTTGATTATGACAAAGTAGAACTTGCAAATATGAACAGACTG
TTTTTTCGACCTGATCAATCTGGGATGAGTAAAGTTGACGCAGCTGTAAA
TACGTTAAgGGATATAAACCCTGATGTAGAGTTCGAAGCACACAATTACA
ATATTACAAGTGTAGATAATTTCAATCATTTCATGGGCAGAATAAAATCA
GGTGGCTTGAACGGAAAGCCAGTCGATTTGGTATTGAGTTGTGTTGATAA
TTTCGAAGCAAGAATGGCTATTAATACTGCGTGTAATGAAATCGGTCAAG
CATGGATGGAATCAGGGGTCAGTGAGAATGCTGTATCAGGACATGTTCAA
GTCATATTACCTGGTGAAACAGCTTGTTTTGCTTGTGCACCACCGTTAGT
AGTGGCATCAAACATTGATGAGAAGACATTGAAGCGTGAAGGAGTATGTG
CTGCTTCTTTACCCACCACCATGGGAATTGTTGCTGGTTTCCTCGTACAA
AATACACTAAAATACTTACTGAAGTTCGGTACAGTATCATACTACTTAGG
TTACAACGCAATGCAGGATTTCTTTCCAACAATGATTATGAAACCCAACC
CGCATTGTGATGAAAGTTTCTGTCTCAAACGACAACAAGCGTACCAGGAG
AAGTTAGCAACACAACCGAAGGAAGAAGGCGTTaaagaaactgaagaaga
agaaattgttCACGAAGATAATGAATGGGGTATTTCATTGGTCGACGAGT
CATCCGATTTACGGGAGGACACACAACTACAAGAATTGACTACTGGACTT
TCGTACGCATATACTAAACCTGCAGAAACAACAGAAGAACAGACTGAACC
AGCCTCTACGACTTCAACGACCGAAGAAGGTGGCGAACAAAGTCTAGAGG
ATTTAATGagacaaatgaaacaaatttagttcttttttagatttaattta
cgaaaaaatcttcttttttaatttttttaagggGGTTGGGtctcttcttt
atttttttttgcaaaaatcaacaGAAGCGAGGCGTGATCTTCTAGCTTTG
AACAATTCATACCTTTTTCGCCCGGGCTTTTTCgtcaaaaagtctttgaa
atCCGACGTCGGAAAGTAGAAAACATTTATCTTTCGCTAGCTTTAataat
tattgaatttgaatttttgaaccaaatttttaaatttctttttatttttt
atgtacTTAAGTGgtataaattttatttattatacaaTACTGAACAATGA
AATTAAAAcagaaaatca
Run BLAST on NCBI

transcript from alignment at sc0000170:49107..61033-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013604 ID=TCONS_00013604|Name=TCONS_00013604|organism=Clytia hemisphaerica|type=transcript|length=11927bp|location=Sequence derived from alignment at sc0000170:49107..61033- (Clytia hemisphaerica)
GATTAATATAATTAATAAAGAAATAAAGAAAAAAGCAAAATGGCAGAAAA
TACTACAAAAAGAGAGAAAATTGCCCAGATGTCTTCTGAGGTTGTGGATA
GTAATCCATATAGGTATATTTTATTATTTCATCTTGTCTTTCTATCATTA
ATTTGTCTTATAATTTAGCATATTTTGGTGCACGTGCTACTGTACTTGAT
CAGTTTTGTTTTTAGGAAGCTCTAGTCTACAGCTATTGGCTTTTATAGTT
ATAAATAAATTTTTGGTTAACGTGTATGTCTGTTTTCTTCAAAAGTTGTC
TTATGATTGTGACTATCTTCTGGGTTATGTCTGTTTATAACCTTAGTTAA
AAATCTATTATCAATCCTTACAACACTTTGGTTTTTTTTATAAATTGTGA
TTAGTTTTACTTCTTTAGTTGTTCTTTTTCTTCAATTACACTCGACTTTA
AAAATCATTAGATATATTAGCACAGTTTAGTGGCCAATATACCCAATATA
CTATAATCCTGTACAATTTTGTAATGGTTCAAATTTTCTCGCAAAACAGA
ATATCAGAGACTATATCAGGCTTATACTTTGTTAAAATTGTAAGAACAAT
CGAGCTCTAGTTTTTTCATTTCAAGATAATCCACTTTTTTGTTCAAAAAA
CTCAACATGATTTTTTTTTAACTTTCAGTCGTTTGATGGCTCTGAAAAGG
ATGGGAATAGTTGATAATTATGAGGTAGGGCATCATTTAAAAAATTTATA
CGTCAAAAATAAAATGTATAAAAGGAACCAAGAAATTAAATTTTATATAA
CCTTGCTATACATTCTTTTCAGTTTTGATTATTTGTCATATTTGCAAGAA
AAATGTAGAAATGTATAAAATCGGAACACGAAATGATAAAAACGTTTTCT
AAGAAAGTGGGAAAATATTGATTTTAAGTCATGTGGCTTTTTTATGATCA
TATTATGATTTAGTCAAACATACAGCAATGCACAAAGTTCATTTGTCTCG
TCTTTATCATTCCGTTCTTCACAATTTGGAGAATCCAGGTTTATTTTTGT
GTAGGATTAAGTTTCCTTCTGAAATTTAAAAAATTTTAATTTAAAGATCC
AAATTTACAAAAAGTTATTCCCCTCTTTTTCAGCGTATTCGTGATTACAG
CATTGCAGTAGTTGGGATTGGAGGTGTGGGCAGTGTAACTTCAGAAATGT
TGACCAGGTGTGGTATAGGAAAGGTAACGTAATGTGTTTTTAGGTTAGAT
ATTAAAAAATCAAATCAAATATTTAAAAACAAGCTCTCCTAGGATGATAT
AGTGCAATACTTTTACTTAAAGGTTTTGTTTTTAAATAAGAGTGATCGTT
TGCTTATTCATCAATTTTAATTTACAAGCTATTTCACATTGGATTGACAC
GGATGTGGAGCAAGATGATTAAAAAGAGGGAAAGAAAAACAGTTTTTATA
TCAGCACAAGATAACAATAGGCAGACACTGTCCTGATATGAAATATGTGT
CTCATATGAAACGGGAACACTTATGTAAAAATAAAACCTTTAAAATAATT
ACATTTTNCCAGATGTCTTCTGAGGTTGTGGATAGTAATCCATATAGGTA
TATTTTATTATTTCATCTTGTCTTTCTATCATTAATTTGTCTTATAATTT
AGCATATTTTGGTGCACGTGCTACTGTACTTGATCAGTTTTGTTTTTAGG
AAGCTCTAGTCTACAGCTATTGGCTTTTATAGTTATAAATAAATTTTTGG
TTAACGTGTATGTCTGTTTTCTTCAAAAGTTGTCTTATGATTGTGACTAT
CTTCTGGGTTATGTCTGTTTATAACCTTAGTTAAAAATCTATTATCAATC
CTTACAACACTATGTTTTTTTTTATAAATTGTGATTAGTTTTACTTCTTT
AGTTGTTCTTTTTCTTCAATTACACTCGACTTTAAAAATCATTAGAGATA
TTAGCACAGTTTAGTGGCCAATATACCCAATATACTATAATCCTGTACAA
TTTTGTGATGGTTCAAATTTTCTCGCAAAAAGGAATATCAGAGACTATAT
CAGGCTTATACTTTGTTAAAATTATAAGAACAATCGAGCTCTAGTTTTTT
CATTTCAAGATAATCCACTTTTTTGTTCAAAAAACTCAACATAATTTTTT
TTTAACTTTCAGTCGTTTGATGGCTCTGAAAAGGATGGGAATAGTTGATA
ATTATGAGGTAGGGCATCATTTAAAAAATTTATACGTCAAAAATAAAATG
TATAAAAGGAACCAAGAAATTAAATTTTATATAACCTTGCTATACATTCT
TTTCAGTTTTGATTATTTGTCATATTTGCAAGAAAAATGTAGAAATGTAT
AAAATCGGAACACGAAATGATAAAAACGTTTTCTAAGAAAGTGGGAAAAT
ATTGATTTTAAGTCATGTGGCTTTTTTATGATCATATTATGATTTAGTCA
AACATACAGCAATGCACAAAGTTCATTTGTCTCGTCTTTATCATTCCGTT
CTTCACAATTTGGAGAATCCAGGTTTATTTTTGTGTAGGATTAAGTTTCC
TTCTGAAATTATTGAAATTCTAATTTAAAGATCCAAATTTACAAAAAGTT
ATTCCCCTCTTTTTCAGCGTATTCGTGATTACAGCATTGCAGTAGTTGGG
ATTGGAGGTGTGGGCAGTGTTACTTCAGAAATGTTGACCAGGTGTGGTAT
AGGAAAGGTAACGTAATGTGTTTTTAGGTTAGATATTAAAAATCAAATAT
ATAAAAACAGCTTTTAATTTACAAGCTATTTCACATTGGATTGGCACAGA
TGTGGAGCAAGATGATTAGAAAGAGGGGAAGAAAAACAGTTTTTATCAGC
ATAGTATAACAATAGGCAGACACTGTCTTGATTTGAAATATGTGTCTCAT
ATGAAATGGGAACACTTATGTAAAAATAAAACCTTTAAAATAATTACATT
TCGATGATAACATTTTAAAGGTCGTTTTCAGGTATTCAATCATCGAATTT
TAGATTTTTTACAATTTTAGATTTTATGACTGGGCTAATCAATAACAAAT
TTAATCGAGGTGTTAAATTCTTTTTGGAAGCTCTCAATCCCCTAGACTTT
GATAAATTTATTACTGATCCCAGCATTTCCAAAGAAATACTGAAAATACT
CTCAAGCTATACTTTAACTTTTCCTCTACTTTAGCTAATTATGTTTGATT
ATGACAAAGTAGAACTTGCAAATATGAACAGGTATGTCTGCTTTCTAATC
AAAATGCAAGGTATATACCCCTAGTCTCTTTCAATTTCTATCTTTTAAAG
TTAAGTATCCAAGGTTGCAGAAAATGGTTGCTATCAACTTTTTATCAGAG
TATTTAACTTTTCTTCTGATTCTAGACTGTTTTTTCGACCTGATCAATCT
GGGATGAGTAAAGTTGACGCAGCTGTAAATACGTTAAGGTTTGGAATTTT
TTATTGAAGACCAAAATATTCTATCTGTACTCATGGGTAATCACCTCATG
TTGGTTAAAATTTTGGAGGTTTTTGCGTCTAACCAACAGCAAGCCGTTAT
GAGGGCGCAATCAGTCCTGATTACTAATGATTCATTTGAAATGATCCTAT
ATTTTTCGTATATTTTTCATGATTCAGCACTACTATAGGCTGCACGCAGC
CCCTCTGATATGTTTTGATATAGGGGCTGAGTGTCGTGTATGAAATCCTC
CTCCGAGAGTTACCCCCGTCTTTGTGTTTTTGAATTTTAGAAACTTGATT
AGCTTGTGATTTTCAATACCCGTCGCCGAAAAAAAAATCTCATCATAATT
AAACTTCTTATACGCCTCAAAGAGTTGAAAAACCTCTCTAAATAATCGAA
ATCTCATCGTTTGACTTTTAATAACAGTATTTTTCATTCCCTGTTTTTAG
GGATATAAACCCTGATGTAGAGTTCGAAGCACACAATTACAATATTACAA
GTGTAGATAATTTCAATCATTTCATGGGCAGAATAAAGTAAGATAAGTAT
TGATTTATATTTATTTATTTATATGTTGTGTTTGTTTTAAAATTTTGTTT
TGAAACACCAAAAATGGTTTTTAGTAATTCTTTTCCTAGGCCCTTAAATC
TGGCTAAATGTTTTATCTGAAATGGTCAAAGTACACTTGACACGTTTTTT
TAGATCAGGTGGCTTGAACGGAAAGCCAGTCGATTTGGTATTGAGTTGTG
TTGATAATTTCGAAGCAAGAATGGCTATTAATACTGTAAGTAAGATCTAT
TTTTCTGTTCTAGTTTTCCATCGTTTACCCCGTGAAATTAAATTAATTAA
TATTTCTCGTGAATTCCCCTTTCAAAAGGTACTCTGGGCTTACAAGACTT
CTTCCGTCTCCAATATTTTATAATAGGAATAAAATTAAAATATTGTTTTT
AAGGCGTGTAATGAAATCGGTCAAGCATGGATGGAATCAGGGGTCAGTGA
GAATGCTGTATCAGGACATGTTCAAGTCATATTACCTGGTGAAACAGCTT
GTTTTGCTGTAAGTAGTCTATATGTCACCATCTGCACAGATATCTTATTT
AAAACACTAGATGGAGCCACTCTGTTGCTGGCTGAAGTAAAACAATGCAC
AGTATTTAAAAGTAGACCACAGCAACTGTGCTATTAGCCAGGAGTTTGAC
CATCTACCCATTCCATGCTCTGTTTGCATTTCTCGACTTCAATTATTGTG
AAGTCGAACAAAAACATCTTTTTCTTAGCACTACTGAAAAAGGCCAGAAA
AGGCTCGATTTTGGTCAAGATAAGAACATACATGGCGCGAGGATCATCGC
CCCAGAACAAGTATCGCGTTTTCGACTAATTTAAGCCTTTTACCTGCTTT
TACAAATATTTGGAGATATCGATGTATTTACTTGAACTGTCGTTTGATCG
AAGACAATTAGTCCAGAACTCATACCTAAAAAGCCTTGGGGCGTTTTATG
CCTAAATTACTTATCGGCCTTTTTACGCAGACCCTAATTTAGCGCCGGCC
CCTATTAGGCCAAAGCTAAATTTTTAGCCCGATTCCTTACGCCGCCCCCT
ATTACGCCAGTGACGAAAAAGTAACGCCATTAAGGACCGGATTAAGAAAT
GGCTGATAAAATAATAATGATAACTTGTAATTTCGATTTTTAAAAGACAG
TTTATATTGATTGTCTTTGGGACATAATGGTGAATTCTTGATTTATTTTT
ACTAGTGTGCACCACCGTTAGTAGTGGCATCAAACATTGATGAGAAGACA
TTGAAGCGTGAAGGAGTATGTGCTGCTTCTTTACCCACCACCATGGGAAT
TGTTGCTGGTTTCCTCGTACAAAATACACTAAAGTAAACAAGTTTTCATC
TTTATGTTTCTACTGTAAATTTTAAGTTGAATCGTAGCTTTCTAAAAGTT
TTTCACCTTTAAATATTACTCCCATAAGTCACTGCACGCCTACTAAAGTC
TGTTCACGATAAGTGTGCACTCTTTTTTCTTTTATCTATAACTTTTGAAG
GAATTCTTCAATCTTTATAAATTTGGTATTATTGGAAAGATATCAGTGAG
TGGAACAATTTGAAATAAAAAAATCTTTTAAAAAATTCTAAAAATGAAGA
TGAAAATGAAGAAGAAAAAAATGAAGATCTTATAGAAAAGTGCTATAACT
GTCATTTTCACTGAAGTGAATCCTTGATCATCGAACATTATCACTGAAAA
AATTTCTCAAAAATAATTATTTTGTCAAAAGATATCAAACAAAGTTATAA
GCTGATTGACGTCTAAAAACGCTGTTTTCTGCTGTTTTCTGCTTTTTTGG
GGTCAATCACTTATTAACTTTGTATCATAACTTTATATTGAATGAATATT
CTAGTGAAATTTCTTCACACTGATAACCTCCTAAGATCAAAGAATCTCTC
CAGTGAAAATGAAAGTCAAAGCCCTTCTCTACAAGATCTTCATTTTTTTC
TTCTTCATTTTCATCCTCGTTTTTAGAATTTTTTCAAAGATTTTTTTATT
TCAAATTGTTTCACTCACTGATATCTTTCCAACAATACCAAATTTATAAA
GATTGAAGAATTGCTTAAAAAGTTATAGGTTAAAGAAAAAAGAGTGCACA
CTTATCGTGAATAGACTTTAGACCTGTAGATTTGGAATGCCATGAGTTGA
AGTAATTATTTTTTCGCCATTCAATGACTTATACATCTACTTATTTTTGA
ATAATTGTAAAAAACCTTGGACCTCAAAGAATATTATTATAGTGTGTTTA
TATTTTAATGACCTGTTTAGTTGCCTTGAGAATTTATTAGCAAATAATTA
CCATAAGCAGTACGGCACGATATCCTATATTTAAGGACCTTATATTTTTA
GAACCGTCCTTATATAGGGATGTCCTTATATTTAAGGACCTTTTTTCTAC
TGGATCGATAAAAACCCGATCTAGTAAGCAAAGGTCCCTATTTATGGGGA
CGTCCTTAAATATAGGTCCTCTCCCGTACAGATAAGGGAACTAATTTAGG
CGAATTTGGCGAAATATTCAACCAAAATTGAAATAATTGCTGGCTCTGGC
TTTCAGTGTAAAGAAACTGATTTGCCATACCATTCGCCAAACTTAGTTCT
CGCCAAAAATAAAATTGCGTTTCTCATCAAAATGATTTCTTTTTAAAAAT
TTCCCGGATACTGTTTTCCGATACCCTTCACACGTATTGATTTCTCTAAA
ATGGTGGCTTCTAGGCTACGCCATCTTCCTTCGTTTCGAGCGTAAAACTT
CTACTCTTCGGGATATGCTCGCAGCTCTTGTTTTGAATATTTCTCCGGAT
ACATCGCATGCGCACTGAGGTTGTAAAGGAACAATCGAGAGTTTCGAAAC
CTAAACCAATCAGCTGTGTTTCAAACATTCTTTTATTTGAAACCTCTATT
GATAAACATCTTTTGTTAAAGTTTTCTATTATTTTTAAACCTAGTAATAA
GCGAATTTCCGGTGGGGGTCACTAGTTGCCTCCCATAGCAGTGCCTATAG
ACCAAGAGTAAGGCCTAAAAGCCTGTAGCTGTCTATTGTTTAGACTAGGT
TGCTTTTCAATCACAAGATAGTTATGATATATCATTGATTTTCAAATTCT
TGTTTGCATATCTTTTCAGATACTTACTGAAGTTCGGTACAGTATCATAC
TACTTAGGTTACAACGCAATGCAGGATTTCTTTCCAACAATGATTATGAA
ACCCAACCCGCATTGTGATGAAAGTTTCTGTCTCAAACGACAACAAGCGT
ACCAGGTGAGCCAGGGCGACCCCCCCCCCCAAGGGCCCCCCCCCCCCCGT
CCCCTAGAAAGGAGGGTACTTAAAATCTTCCAAAAATAGGCCTTATCGAA
GTTTTTGATTTTTCTAAAAAAATCGATGCATTGTGGGATTTTTTCGAGTG
TATTACAATAGAAATCTCTTAGGAATTCATCGAGGGAATTCTATTGTAAT
ACACTTGAAACAATCCCACAATGCATTGCTTTTATAGAAAAATCAAGGTC
TATTACTAAAAGGCAGGGTAAAGAACAAAACAAACTGTACCAAAGATTGT
TATTTTCGAAAGTCTGTCCTTTTGGGATCAAAAAAAGCTGGAATGGATTT
TTTTGGGGGTAGGTACATTATGCACTAAGTGGAGATTTAAGTTGTAAATT
TATTAAGGTATGGATGGATTTTTCAGGGAAACCCAACTACGCACAAAGGG
GAGTGTTTCTACGGAAACTGTAATTTTTCAACAGAATGCTATGATAGAAA
AGAAATTCATGATATGCACCATTGCAATGTCTTCCATTCCACCCAATAGC
TGATTGGTTGTAAGTGACGTATTGACTGATTTTACGTCACTTACAACCAA
TCAGCTGTTGGGTCCGTGATGTAATGTCAGAAGACATTGCAGTGGTGCAT
ATCATGAATACCCCATTTCATTCACAGTCGAAATGAATCATGGGTAATCA
GGACCACCACGCTCCGATAAGGACTTTCAATTGGTCTAAATTTTAGGATG
TTTTTGTGTCTAGCCAACGAAAAGCTGTTATGGAGGCGCAATCATTCCTG
ATTACCCATGATTCATTTAGACTGTAAAATGGCTTAGAGAGGCCTTTAAT
ATATCCTTTTCTAACTTTTAAACATAACTTTTTTATTCTTTACTTTACCT
CACAGGAGAAGTTAGCAAAACAACCGAAGGAAGAAGGCGTTAAAGAAACT
GAAGAAGAAGAAATTGTTCACGAAGATAATGAATGGGGTATGTAAAGTCT
ACTTCACTAGCAGGGAACAATAGCAAAGACTGTAATACTTTCGTTATAGT
TTGTATTTGAATAACATTCTTCTGATCGTTGAAAATATTTTTGTAAGACC
TTTGAAGTAAACCATTTTTCCTATGTCTGTAAATATTAATCTGTGAGTTC
CCACGCGGTTTATTTTAAACATGGCAAACTGCTTCTTTGTCTGTACACCC
AGTATCTACAGCTAATTCCAAAATTCATTGCCGTAGGGGATAAACGTACT
CCGTACTACGAAGCGATAAACGTGAGATACACTCTGGTACATAGTAACTG
CTTCTATGCTTGGTGTTTAATAGGATTTTTAATGGTATTAAAAATCTTTC
CGAAGATAGTTAAAGAAGACTCTTTCTCCCTGGATTGCTCTACCTACCCT
TAATCATTCTCTTAGTTGCTAAGCATCAAGCAGAGAGGCGTCAAAGTACC
ATTTTGGGAATCTTTGGTATGATCCGGCTGGGGGTCGAACCCACAACCTT
GCGCACCGTAGCCGGGTGCTCTACCACTGCACTACGGTCTGAATAAACTG
AAACATATTTAATGTACCTTTTACTTGCACTTTTTAATCACCATAGGTAT
TTCATTGGTCGACGAGTCATCCGATTTACGGGAGGACACACAACTACAAG
AATTGACTACTGGACTTTCGTACGCATATACTAAACCTGCAGTGAGTCCT
TTCTATGTATTAATGCTGACAAGCTTGATAAGATACTACCATTTTTAATA
ATTTATTTTAAAAGCGAAATGCTTTGTCAAGAGACACAATTCAGTTTTTT
TTCTAACAAGCAAGTTTTAAAGTGTATGAAATGATAAACAAAATTTAAAC
CTTTCCATATTATGTAACCTTTTTCAACGGAAAAAAGGAAAAAAGGCCAA
AGCCAAAATCTCCAACTAAAATCCAATTAAAAATGTCGATGATGTTATTA
GCCCTGGGTTCGAGGGTGGGTTCTTTGTTTTGTAAAATTCATGATATGTA
CCATTACAATGTCTTCCAAGTACCCATTAGCTGATTGGTTGAAAGTGACG
TAAAAAGACTAAATTGATTGATTTTACGTCACTTACAACCAATCAGCTGT
TGGGTCTTTAATGTAATGTAAGAAGACATTGCAATGGTGCATATTATGAA
TAGGGACCTTTAGCATCTAGGACGGCAGGATTGAACAAAAATGCCCTTGG
GATTGATATGTGGATCGCAGCTAGATTCTTANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NAACTTTTTTATTCTTTACTTTACCTCACAGGAGAAGTTAGCAACACAAC
CGAAGGAAGAAGGCGTTAAAGAAACTGAAGAAGAAGAAATTGTTCACGAA
GATAATGAATGGGGTATGTAAAGTCTACTTCACTAGCAGGGAACAATAGC
AAAGACTGTAATACTTTCGTTATAGTTTGTATTTGAATAACATTCTTCTG
ATCGTTGAAAATATTTTTGTAAGACCTTTGAAGTAAACCATTTTTCCTAT
GTCTGTAAATATTAATCTGTGAGTTCCCACGCGGTTTATTTTAAACATGG
CAAACTGCTTCTTTGTCTGTACACCCAGTATCTACAGCTAATTCCAAAAT
TCATTGCCGTAGGGGATAAACGTACTCCGTACTACGAAGCGATAAACGTG
AGATACACTCTGGTACATAGTAACTGCTTCTATGCTTGGTGTTTAATAGG
ATTTTTAATGGTATTAAAAATCTTTCCGAAGATAGTTAAAGAAGACTCTT
TCTCCCTGGATTGCTCTACCTACCCTTAATCATTCTCTTAGTTGCTAAGC
ATCAAGCAGAGAGGCGTCAAAGTACCATTTTGGGAATCTTTGGTATGATC
CGGCTGGGGGTCGAACCCACAACCTTGCGCACCGTAGCCGGGTGCTCTAC
CACTGCACTACGGTCTGAATAAACTGAAACATATTTAATGTACCTTTTAC
TTGCACTTTTTAATCACCATAGGTATTTCATTGGTCGACGAGTCATCCGA
TTTACGGGAGGACACACAACTACAAGAATTGACTACTGGACTTTCGTACG
CATATACTAAACCTGCAGTGAGTCCTTTCTATGTATTAATGCTGACAAGC
TTGATAAGATACTACCATTTTTAATAATTTATTTTAAAAGCGAAATGCTT
TGTCAAGAGACACAATTCAGTTTTTTTTCTAACAAGCAAGTTTTAAAGTG
TATGAAATGATAAACAAAATTTAAACCTTTCCATATTATGTAACCTTTTT
CAACGGAAAAAAGGAAAAAAGGCCAAAGCCAAAATCTCCAACTAAAATCC
AATTAAAAATGTCGATGATGTTATTAGCCCTGGGTTCGAGGGTGGGTTCT
TTGTTTTGTAAAATTCATGATATCTACCATTGCAATGTCTTCCAAGTACC
CATTAGCTGATTGGTTAAAAGTGACGTAAAAAGACGAAATTGATTGATTT
TACGTCACTTACAACCAATCAGCTGTTGGGTCTTTAATGTAATGTAAGAA
GACATTGCAATGGTGCATATTATGAATAGGGACCTTTAGCATCTAGGACG
GCAGGATTGAACAAAAATGCCCTTGGGATTGATATGTGGATCGCAGCTAG
ATTCTATTCTTTTCATATCAATTTTCTCATGAGAATAGTGAATTTTAATA
GGGTAATTTTCAAATCTCAAGACGATATGAAAATTCTTTTCTGACGTCGT
CTTTGAGAAGATGGTAAAGGAAGAGTGCAATAGTTTTTAATGATATGAAT
CACTAGAGAATTATAACGTGATCTACAAAAAAATTGACTATATTTCAAAT
TATAGTTAATTCTAGATAAAATCGGATAAAATTTGCCGTTTGATTTAAGA
TTTACTTCACGTCCCTAAAGGTCCCTAATATTGTGTCCGTTACAGACGGA
AATTTGATCCGAAGATCTTATATTTTCGGACAGAGCTTGTTTTTTCGGAA
AATGAAGTTAATTCCAGACTTCTTTTAAGATGTCTTACTTTAAAATATCA
ACCGAACTCTAAAGCAAAAACTAGAGCGTACATTTCTATGGAAATTTGGA
AAGTTTTTCTGGGTAGTGAGAAAGTTGAGTAGCATTACAGTACCTTTTAT
ATAAGTTCTATAAGTTCTTTCTTTATCCCATAGGAAACAACAGAAGAACA
GACTGAACCAGCCTCTACGACTTCAACGACCGAAGAAGGTGGCGAACAAA
GTCTAGAGGATTTAATGAGACAAATGAAACAAATTTAGTTCTTTTTTAGA
TTTAATTTACGAAAAAATCTTCTTTTTTAATTTTTTTAAGGGGGTTGGGT
CTCTTCTTTATTTTTTTTTGCAAAAATCAACAGAAGCGAGGCGTGATCTT
CTAGCTTTGAACAATTCATACCTTTTTCGCCCGGGCTTTTTCGTCAAAAA
GTCTTTGAAATCCGACGTCGGAAAGTAGAAAACATTTATCTTTCGCTAGC
TTTAATAATTATTGAATTTGAATTTTTGAACCAAATTTTTAAATTTCTTT
TTATTTTTTATGTACTTAAGTGGTATAAATTTTATTTATTATACAATACT
GAACAATGAAATTAAAACAGAAAATCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007592XLOC_007592Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013604-exon-sc0000170-1575043694:60944..61033TCONS_00013604-exon-sc0000170-1575043694:60944..61033Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1575043694:59437..59459TCONS_00013604-exon-sc0000170-1575043694:59437..59459Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1575043694:58826..58871TCONS_00013604-exon-sc0000170-1575043694:58826..58871Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1575043694:58327..58416TCONS_00013604-exon-sc0000170-1575043694:58327..58416Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1575043694:57803..57849TCONS_00013604-exon-sc0000170-1575043694:57803..57849Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1575043694:57596..57658TCONS_00013604-exon-sc0000170-1575043694:57596..57658Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1575043694:57047..57133TCONS_00013604-exon-sc0000170-1575043694:57047..57133Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1575043694:56799..56880TCONS_00013604-exon-sc0000170-1575043694:56799..56880Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1575043694:56526..56630TCONS_00013604-exon-sc0000170-1575043694:56526..56630Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1575043694:55701..55828TCONS_00013604-exon-sc0000170-1575043694:55701..55828Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1575043694:53779..53914TCONS_00013604-exon-sc0000170-1575043694:53779..53914Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1575043694:51321..51402TCONS_00013604-exon-sc0000170-1575043694:51321..51402Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1575043694:50617..50711TCONS_00013604-exon-sc0000170-1575043694:50617..50711Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1575043694:49107..49550TCONS_00013604-exon-sc0000170-1575043694:49107..49550Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1510915933:60944..61033TCONS_00013604-exon-sc0000170-1510915933:60944..61033Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1510915933:59437..59459TCONS_00013604-exon-sc0000170-1510915933:59437..59459Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1510915933:58826..58871TCONS_00013604-exon-sc0000170-1510915933:58826..58871Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1510915933:58327..58416TCONS_00013604-exon-sc0000170-1510915933:58327..58416Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1510915933:57803..57849TCONS_00013604-exon-sc0000170-1510915933:57803..57849Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1510915933:57596..57658TCONS_00013604-exon-sc0000170-1510915933:57596..57658Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1510915933:57047..57133TCONS_00013604-exon-sc0000170-1510915933:57047..57133Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1510915933:56799..56880TCONS_00013604-exon-sc0000170-1510915933:56799..56880Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1510915933:56526..56630TCONS_00013604-exon-sc0000170-1510915933:56526..56630Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1510915933:55701..55828TCONS_00013604-exon-sc0000170-1510915933:55701..55828Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1510915933:53779..53914TCONS_00013604-exon-sc0000170-1510915933:53779..53914Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1510915933:51321..51402TCONS_00013604-exon-sc0000170-1510915933:51321..51402Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1510915933:50617..50711TCONS_00013604-exon-sc0000170-1510915933:50617..50711Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1510915933:49107..49550TCONS_00013604-exon-sc0000170-1510915933:49107..49550Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1491911889:60944..61033TCONS_00013604-exon-sc0000170-1491911889:60944..61033Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1491911889:59437..59459TCONS_00013604-exon-sc0000170-1491911889:59437..59459Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1491911889:58826..58871TCONS_00013604-exon-sc0000170-1491911889:58826..58871Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1491911889:58327..58416TCONS_00013604-exon-sc0000170-1491911889:58327..58416Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1491911889:57803..57849TCONS_00013604-exon-sc0000170-1491911889:57803..57849Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1491911889:57596..57658TCONS_00013604-exon-sc0000170-1491911889:57596..57658Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1491911889:57047..57133TCONS_00013604-exon-sc0000170-1491911889:57047..57133Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1491911889:56799..56880TCONS_00013604-exon-sc0000170-1491911889:56799..56880Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1491911889:56526..56630TCONS_00013604-exon-sc0000170-1491911889:56526..56630Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1491911889:55701..55828TCONS_00013604-exon-sc0000170-1491911889:55701..55828Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1491911889:53779..53914TCONS_00013604-exon-sc0000170-1491911889:53779..53914Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1491911889:51321..51402TCONS_00013604-exon-sc0000170-1491911889:51321..51402Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1491911889:50617..50711TCONS_00013604-exon-sc0000170-1491911889:50617..50711Clytia hemisphaericaexon
TCONS_00013604-exon-sc0000170-1491911889:49107..49550TCONS_00013604-exon-sc0000170-1491911889:49107..49550Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000170supercontigsc0000170:49107..61033 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.16938	6.4694	0.854243	0.711863	12.033	2.18535	9.37174	13.5091	7.26826	5.6231	2.45132	4.02222	2.23956	1.64407	8.24195	3.80697	9.58961	7.42323	0.992967	4.94235	6.14369	2.37019	10.6375	3.32216	0	0	8.28248	8.50748	3.48006	4.88961
Blast
[Close]
BLAST of TCONS_00013604 vs. Swiss-Prot (Human)
Match: UBA5 (Ubiquitin-like modifier-activating enzyme 5 OS=Homo sapiens GN=UBA5 PE=1 SV=1)

HSP 1 Score: 468.774 bits (1205), Expect = 1.107e-161
Identity = 260/376 (69.15%), Postives = 306/376 (81.38%), Query Frame = 1 
Query:   61 REKIAQMSSEVVDSNPYSRLMALKRMGIVDNYERIRDYXXXXXXXXXXXXXTSEMLTRCGIGKLIMFDYDKVELANMNRLFFRPDQSGMSKVDAAVNTLRDINPDVEFEAHNYNITSVDNFNHFMGRIKSGGLN-GKPVDLVLSCVDNFEARMAINTACNEIGQAWMESGVSENAVSGHVQVILPGETACFACAPPLVVASNIDEKTLKREGVCAASLPTTMGIVAGFLVQNTLKYLLKFGTVSYYLGYNAMQDFFPTMIMKPNPHCDESFCLKRQQAYQEKLATQPKXXXXXXXXXXXXXXXXXXWGISLVDESSDLREDT---QLQELTTGLSYAYTKXXXXXXXXXXXXXXXXXXXXXXXXSLEDLMRQMKQI 1176
            R +I +MSSEVVDSNPYSRLMALKRMGIV +YE+IR +++A+VG+GGVGSVT+EMLTRCGIGKL++FDYDKVELANMNRLFF+P Q+G+SKV AA +TLR+INPDV FE HNYNIT+V+NF HFM RI +GGL  GKPVDLVLSCVDNFEARM INTACNE+GQ WMESGVSENAVSGH+Q+I+PGE+ACFACAPPLVVA+NIDEKTLKREGVCAASLPTTMG+VAG LVQN LK+LL FGTVS+YLGYNAMQDFFPTM MKPNP CD+  C K+Q+ Y++K+A  PK       EEEEI+HEDNEWGI LV E S+         + +L  G++ AYT        + +  S T  T E   +SLEDLM +MK +
Sbjct:   37 RVRIEKMSSEVVDSNPYSRLMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWMESGVSENAVSGHIQLIIPGESACFACAPPLVVAANIDEKTLKREGVCAASLPTTMGVVAGILVQNVLKFLLNFGTVSFYLGYNAMQDFFPTMSMKPNPQCDDRNCRKQQEEYKKKVAALPK--QEVIQEEEEIIHEDNEWGIELVSEVSEEELKNFSGPVPDLPEGITVAYT------IPKKQEDSVTELTVEDSGESLEDLMAKMKNM 404
The following BLAST results are available for this feature:
BLAST of TCONS_00013604 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBA51.107e-16169.15Ubiquitin-like modifier-activating enzyme 5 OS=Hom... [more]
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