TCONS_00012839 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012839
Unique NameTCONS_00012839
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2071

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012839 ID=TCONS_00012839|Name=TCONS_00012839|organism=Clytia hemisphaerica|type=transcript|length=2071bp
attataacttcatcttgttATATATCGTACagtaaaagataaaaaacaac
cGGATATGTCAGGGCAAGAACAAGAAACAGACAGAAATGTTGAGATTTGG
AAAATTAAGAAACTTATTAAAAGTCTTCAAGCAGCTAGAGGCAATGGCAC
TAGCATGATTTCCCTCATCATTCCACCAAAAGATCAAATTTCTCGAATCG
CCAAAATGTTGGCTGATGAATTTGGTACAGCATCAAATATTAAAAGCAGA
GTCAACAGaTTATCTGTCCTTGGAGCTATCACATCAGTACAACAACGTCT
AAAATTATATAATAAAGTACCTCCAAACGGTTTGGTTGTTTATTGTGGTA
CTATTGTGACgtcagaaggaaaagaaaagaaagttaatATTGATTTCGAG
CCTTTCAAACCAATCAATACATCTTTATACTTATGTGACAATAAATTTCA
TACAGAGGCTTTAACTGCGCTCCTGGAGGATGACAGCAAGTTTGGATTCA
TTATAATGGACGGTAACGGCGCATTATTTGGAACACTTTGCGGAAATACA
AGAGATGTCTTACATAAATTCACTGTTGATTTACCAAAGAAGCATGGTCG
TGGTGGTCAATCTGCTTTACGTTTTGCACGTTTACGTATGGAGAAACGTC
ACAATTACGTCAGAAAAGTGGCTGAGACGGCTGTACAGATGTTCATTTCC
AACGATAAAATCAATGTGGCTGGTCTTGTTATTGCTGGTTCTGCAGATTT
CAAATCAGAGTTGAGTCAGTCTGATATGTTTGATGGTCGGTTACAagcaa
aaatattgaaagttgTTGATGTTTCATATGGTGGTGAAAATGGTTTCAAC
CAGgCAATCGAATTATCAGCCGAAGTTCTTTCAAACGTCAAGTTCATTCA
AGAGAAGAAATTGATAGgaaaatattttgacgAAATCTCACAAGATACAG
GTCGCTTTTGTTTCGGCGTCGACGACACATTGAAGGCTTTGGAAATGGGA
GCTGTTGAAACACTCATTGTTTGGGAAAatcttgaaacacaacgtataAC
CTTGAAAAATCACAGTTCGGACGatAATAACATTTTGCTACTGAATCCTG
AACAAGAAAAAGATAGAACAAACTTCCTGGATAAGGAAACTAACGTTGAG
TTGGAAATATTGGACAAAATGCCGCTCTTGGAATGGCTTGCTAATAATTA
CAAATCCTTCGGTGCTGCATTGGAAATCGTTACAGATCGTTCACAAGAAG
GCTCGCAATTTTGTCGTGGTTTCGGTGGTATTGGAGGTTTACTGCGGTAC
AAAGTGGACTTTCAATCGATGGACTACGATGATTTGGATGACCTTGACTA
TTACGATGATGACGATGAATCTCTCTTCTAAatagtgaacaaaaaatgaa
agattttatcaaatcatCCCATCATCGGTATAAATACACAGAAAGTGCAA
TACAGTGAAGTTTCATTACGAAACGCCATTGAACTGTTGATACCGAAGAG
CAACTGAATGGTTCCATCCTATGGCTGGTGGCACGAAAAACAGTTCGCTT
TTAATGATTTTGACGTTAAAGATGGGGGTGTCTCCTCTATAAGTGAAACA
AACGACGACCTAATGACGTTTCAGCAATAACTGTAGAAGACAAGAAAGAA
GCCTTTGAATAGGCTCATCAGAAACGAGGgcgatattttatttttgaaaa
tcgagattttattttatttggtttttattgTAGTTCTccattgttgtttt
ttcttatttgttcGCCATTCTCCAAAAAGACTTTTATCGTGAAAAGTCCA
AGACAAGGTTTTTACAAATTCGCCGACGTAGATTCCAATGAAAACCAGAA
TGTTATCTCTCATTTAGCATGACCttaaatagtaaagtaaattttgtgtt
ttattACTGGGCATTTGTATTTTTGTGTATTTATTCAGATAATTTCAGAA
TAACAGAATTGTGTCAATCGTTCATATTTGTCTGACTTCCAATTTAAGAG
TTGCCTAACGACTACCCAACGAGGGTTGTTCCAGaagcttttttttatat
atattctAAAAAACATCGAAG
Run BLAST on NCBI

transcript from alignment at sc0000156:338684..352828-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012839 ID=TCONS_00012839|Name=TCONS_00012839|organism=Clytia hemisphaerica|type=transcript|length=14145bp|location=Sequence derived from alignment at sc0000156:338684..352828- (Clytia hemisphaerica)
ATTATAACTTCATCTTGTTATATATCGTACAGTAAAAGATAAAAAACAAC
CGGATATGTCAGGGCAAGAACAAGAAACAGACAGAAATGTTGAGATTTGG
AAAATTAAGAAACTTATTAAAAGTCTTCAAGCAGCTAGAGGGTAAGTGTT
TTATAACTGAATTCTAAAAATGAAAAATTCCCACTTACCTTCACAGCCAA
ATTAATTAATAGAGTAAGTAGAATGAAGCAAGTTCATTTATAAGCGATGG
GTATATCAAGTTAATTAATTCCCTTACTTTTTAGCAATGGCACTAGCATG
ATTTCCCTCATCATTCCACCAAAAGATCAAATTTCTCGAATCGCCAAAAT
GTTGGCTGATGAATTTGGTACAGCATCAAATATTAAAAGCAGAGTCAACA
GGTATCTTTTTAATACTAACTATAACAGCTTGATCTACTATGATTAGGCC
TTTTTGTAAAGATATGCAAAATTTAATGGATTTTAATCAGTTTTGCTTAA
GCTAGAAGTACATATTTCTAGGTTACTCGTACCTTTTTTATTGACAAAGG
GTTTAGTTTAATATTATGTGAAAAGACTTCTTTCTCAGATTTATGTGAAA
GGGGAAGTCCATTTCAAGTTTTATGAATGCTAAGATGACATATAGCACCT
AAATCAAGCTAAATCATTTATCAGATGTCTGAATTATTGTTGGGAGCAGT
TGCGAGTATTATTATGGCACATTTAAATTTTCTGATCACAACCGGGTCCT
TCAAGGCAGAATTCTTAATAAGGATTTAACTTTATCAGCACTCAATATTA
ATTTGTATTTGTATTTGTGACTCAAAATCGAAGGCCAGATGTGGTTTGTT
TGGCTGTTTTTTATTGCCTGATAAATTTTCAACTTTTCACTAATTTGGGC
TAAAGTCTGTCCCAAAAGTATGTGGAAACTCTACCCTTTTGACCAAATCT
CAGCATGTATAAATGCGTTATATTGAAAGGCTATACACCATTGGAAATTT
GGAAATTTATAAGAACCACATCTACCAAAATTTTGTGCTGAGAAATTGTT
TAAAATGTATAAAAGTGTCCGCATAGAGACAGACTTTAGTAATACAAGGT
ACCGGCTGACTTTTGGATGAAAAAAATCTTATTTTAGATTCATGTATAAA
TATTTATTATTGAACATACTTGCTTCACTGTTCCTGTTTGCTTAAAATTT
GATTTTTTGTTTAGATTATCTGTCCTTGGAGCTATCACATCAGTACAACA
ACGTCTAAAATTATATAATAAAGGTAAAGCTCCACTTATGTATTTGAACG
ATAATAATGTTATAGCATTGCTTGCAACATATTAACGCTCCTTACTTTTG
AAAAATAAGAAAAATGTATCCCTTTTTTGACAAGCATGGTTTTTGCATTA
TATTGGTTAAATTTTGTTAAATTGGTTACTGTAATTTTAATTTCGGCAAC
ATATGAAAGCCTGAAACACAGTTCCCAAGTTAAAGAAAGAAAATGTCATC
GTAACAAAATAATGTATTTTTATCTGATTTTCTTTGGGGCTGCATTGGCA
ATATCCACTGTTTCAATGTGTGAATATCTCTTTTGTTGTCAATTTCAGTA
CCTCCAAACGGTTTGGTTGTTTATTGTGGTACTATTGTGACGTCAGAAGG
AAAAGAAAAGAAAGTTAATATTGATTTCGAGCCTTTCAAACCAATCAATA
CATCTTTATACTTATGTGACAATAAATTTCATACAGAGGTAAGAGCATGC
ATACTTCTGACTGGAACAACATTGCAACTACCCNAGTATTTGTATTTGTG
ACTCAAAATCGAAGGCCAGATGTGGTTTGTTTGGTTGTTTTTTATTGGCT
GATAAATTTTCAACTTTTCACTAATTTGTGCTAAAGTCTGTCCCAAAAGT
ATGTGGAAACTCTACCCTTTTGACCAAATCTCAGCATGTATAAATGCGTT
ATATTGAAAAGCTATACACCATTGGAAATTTGGAAATTTATAAAAACCAC
ATCTACCAAAATTTTGTGCTGAGAAATTGTTTAAAATGTAAAGTGTCCGC
ATAGAGACAGACTTTAGTAATACAAGGTACCGGCTGACTTTTGGATGAAA
AAAATCTTATTTTAGATTCATGTATAAATATTTATTATTGAACATACTTG
CTTCACTGTTCCTGTTTGCTTAAAATTTGATTTTTTGTTTAGATTATCTG
TCCTTGGAGCTATCACATCAGTACAACAACGTCTAAAATTATATAATAAA
GGTAAAGCTCCACTTATGTATTTGAACGATAATAATGTTATAGCATTGCT
TGCAACATATTAACGCTCCTTACTTTTGAAAAATAAGAAAAATGTATCCC
TTTTTTGACAAGCATGGTTTTTGCATTATATTGGTTAAATTTTGTTAAAT
TGGTTACTGTAATTTTAATTTCGGCAACATATGAAAGCCTGAAACACAGT
TCCCAAGTTAAAGAAAGAAAATGTCATCGTAACAAAATAATGTATTTTTA
TCTGATTTTCTTTGGGGCTGCATTGGCAATATCCACTGTTTCAATGTGTG
AATATCTCTTTTGTTGTCAATTTCAGTACCTCCAAACGGTTTGGTTGTTT
ATTGTGGTACTATTGTGACGTCAGAAGGAAAAGAAAAGAAAGTTAATATT
GATTTCGAGCCTTTCAAACCAATCAATACATCTTTATACTTATGTGACAA
TAAATTTCATACAGAGGTAAGAGCATGCATACTTCTGACTGGAACAACAT
TGCAACTACCCCAGAGTTGGGGCACCTACCTGCACCTGCAGTAATAAAAA
TAAATAAAAAAAGCAACTCACTTTTTGTAAGGGTCTGAACAAACACCATG
GAAATTCTTTTAAAGAGACCTGATCTATAATGATTCTATAAATTATTTTT
AGTATACGAAAACGTCTTCCATTTAGCTTTATGAGCAATTTTCATCTCCC
TCATGCTCACTTGGTTTGTACAGATAGCTAGCTACATTGGTGATTTTTTT
GTAGGACCTTTTACCAGAGTCATTATCTTACAAACATAATTTTGATAAGA
TTCCACTGGATTTCATGAATCAAAACTAGTCTGCAACCAAACTTCAAAAA
TAACCAACCAATATCACCATGCTAATTGTATATTCTTCTGCTTATGGCTA
TTATAGGCTTTAACTGCGCTCCTGGAGGATGACAGCAAGTTTGGATTCAT
TATAATGGACGGTAACGGCGCATTATTTGGAACACTTTGCGGNGCTTGCA
ACATATTAACGCTCCTTACTTTTGAAAAATAAGAAAAATGTATCCCTTTT
TTGACAAGCATGGTTTTTGCATTATATTGGTTAAATTTTGTTAAATTGGT
TACTGTAATTTTAATTTCGGCAACATATGAAAGCCTGAAACACAGTTCCC
AAGTTAAAGAAAGAAAATGTCATCGTAACAAAATAATGTATTTTTATCTG
ATTTTCTTTGGGGCTGCATTGGCAATATCCACTGTTTCAATGTGTGAATA
TCTCTTTTGTTGTCAATTTCAGTACCTCCAAACGGTTTGGTTGTTTATTG
TGGTACTATTGTGACGTCAGAAGGAAAAGAAAAGAAAGTTAATATTGATT
TCGAGCCTTTCAAACCAATCAATACATCTTTATACTTATGTGACAATAAA
TTTCATACAGAGGTAAGAGCATGCATACTTCTGACTGGAACAACATTGCA
ACTACCCCAGAGTTGGGGCACCTACCTGCACCTGCAGTAATAAAAATAAA
TAAAAAAAGCAACTCACTTTTTGTAAGGGTCTGAACAAACACCATGGAAA
TTCTTTTAAAGAGACCTGATCTATAATGATTCTATAAATTATTTTTAGTA
TACGAAAACGTCTTCCGTTTAGCTTTATGAGCAATTTTCATCTCCCTCAT
GCTCACTTGGTTTGTACAGATAGCTAGCTACATTGGTGATTTTATTGTAG
GACCTTTTACCAGAGTCATTATCTTACAAACATAATTTTGATAAGATTCC
ACTGGATTTCATGAATCAAAACTAGTCTGCAACCAAACTTCAAAAATAAC
CAACCAATATCACCATGCTAATTGTATATTCTTCTGCTTATGGCTATTAT
AGGCTTTAACTGCGCTCCTGGAGGATGACAGCAAGTTTGGATTCATTATA
ATGGACGGTAACGGCGCATTATTTGGAACACTTTGCGGAAATACAAGAGA
TGTCTTACATAAATTCACTGTTGATTTACCAAAGAAGCATGGTAATTTTT
TTACACATGTTATATTTCATCTCTTATCTACTGGTGAAAGCGAAAATATT
TCTGCTGAAAGAAATGCATCAAAAAGTATTAAACTTTGCTTAACTTTGCT
TGCTGGTTACTGGGGGCAGATAAGCAAAACTTCAAGTTGTAGCTCTAAAG
TTTTGCAAAGACACGCTGCATGGAATGTAAAGTAATTTTTATGAAACACT
TTTGACGTTGTCATAGCAACAAACAATTACTTTTAAAATCATATAATGGC
TGGCACCAGTACTAAGAGCGTACCAGTACAATTTTGACTTTCTGATATAT
GAAACCAATTGTTAACCAGTCCCAAATTAATTGGATCCTGTCCTTACTTT
GAAAGCTGTGCAATCTTAGGATTTACATTTAATTGACGATAAATTTGGGG
ATATTATGAGAAACTTTTCGGCACTGGTAAACAAATTATGATGGAGGGTA
CAGGTGGGTATTCAATTTGATGGATCTTACCGAAAACCTAGACCAACGTC
CGAGGTTCAGAAAATGCCTTAAAAATGGTTTTCGTAGGGCACCCCNTGCT
TGCCAGACCCCATCGAACGTGGTCTCGTATTTTTACTATATTTTTCAAGT
TGAAGAAGGGCATACAAGTTTTTAGTTTGCAAAGTTTATCAGCAACCTAA
AGTGATATTGACTCCATTTTCAATCTGTTATTTGTTAGATCAATGTCGCT
GGTCTTGTTATTGCTGGTTCTGCAGATTTCAAATCAGAGTTGAGTCAGTC
TGATATGTTTGATGGTGTAAGTGAATTAACTTATAATATCCGGTATCGAA
ATTTATAGACAATACTTTCTTTTTTCAAAGCAATAACCTCCTCATCAATT
CACGATATGCATCACTGCAATGTCTTCATCATCACACCTTAGACCCGACA
GCTGATCGGTTGTAAGTGACGTAAAATCAGTCAATACTTCACTTTGCAAC
CAATCAGCTGCTGATGTAATGTTAGAAGACATTGCAATGGTGCATATCAT
GAATGCTGGAACCTAAAAGACTATGGCGACTATTTTAATTATTCTCACAT
TTTCTTTACCAGCGGTTACAAGCAAAAATATTGAAAGTTGTTGATGTTTC
ATATGGTNTATTTTCCTAGAGGAATTTTCAGAAAAAGTCATTCTCACGGC
TGGATAGCCCTGAAGTAGAAGTATCCAAAAATGGTATTGTTTGTCAGCTT
TCGTTTCTAGATATTGAAAATTATCGATTTTTTTTGCTGAGTCAGCAGTT
TTTCAGCATATTTACCCACTTTAAAAATGAAATATCTCAAGAAAGTTAAC
AAACCATACCATTTTCGGATACTACTAATTCAGGGCTATCCAGCTGTGGA
AATGATTTTTTCTGAAAATGCTCCCAGAAAAATGCTGACGTCATCGGAAA
ACGCCAAAAAGGTCGATTTTTAATAAAATCTTCCTCAAAGGTCGTGGTGG
TCAATCTGCTTTACGTTTTGCACGTTTACGTATGGAGAAACGTCACAATT
ACGTCAGAAAAGTGGCTGAGACGGCTGTACAGATGTTCATTTCCAACGAT
AAAGTAGGTGTTGTTTGTAGCCAGTATTGTTTAAGTCAACAATTTTCTTT
TCTGTAAAAGAAAGGATGAAATTTTACAAAATACAAGCTCTCGCTTACCA
GACCCCATCGAACGTGGTCTCGTATTTTTACTATTTTTTTCAAGTTGAAG
AAGGGTATACATTATATGCAAATGATACCTGCAGTGTGATAAGTTTTTAG
TTTGCAAAGTTTATCAGCAACCTAAAGTGATATTGACTCCATTTTCAATC
TGTTATTTGTTAGATCAATGTGGCTGGTCTTGTTATTGCTGGTTCTGCAG
ATTTCAAATCAGAGTTGAGTCAGTCTGATATGTTTGATGGTGTAAGTGAA
TTAACTTATAATATCCGGTATCGAAATTTATAGACAATACTTTCTTTTTT
CAAAGCAATAACCTCCTCATCAATTCACGATATGCATCACTGCAATGTCT
TCATCATCACACCTTAGACCCGACAGCTGATCGGTTGTAAGTGACGTAAA
ATCAGTCAATACTTCACTTTGCAACCAATCAGCTGCTGATGTAATGTTAG
AAGACATTGCAATGGTGCATATCATGAATGCTGGAACCTAAAAGACTATG
GCGACTATTTTAATTATTCTCACATTTTCTTTACCAGCGGTTACAAGCAA
AAATATTGAAAGTTGTTGATGTTTCATATGGTGGTGAAAATGGTTTCAAC
CAGGTATCTAGCTGTTTGTTCGAAATGCGATAGAGAGTCTTCCTTTATTT
GCCAGAAGTACGACTTTCTGAATGTGTTTTTCTAATAGCCCTAACGATAA
TAAAAATGTATCCTGAGCTTCATCGAATATTTCTATTTACATTGTTTCTT
TTGTTTCTTTTCAGGCAATCGAATTATCAGCCGAAGTTCTTTCAAACGTC
AAGTTCATTCAAGAGAAGAAATTGATAGGTATAATGAACGCTTTTTGGAC
CTACCTCCGGGTACCCCGGTGGAGGTTCTATAAATTAACCCATGTCCGTC
CGTCCGTCCGTCCGTCCGTCTGTTACCAGCTTTTCTCAGGATTGGCTCAT
TAGTTTTTTCTGATTTTTTGCACAATGATGCAAAATGGCAATGCCCAGAA
CGTGACGGAGCCCGATTTTTGAGAAAAAATTTATAAAATAGGGTTTTTTG
GACTTTGTGCAAAATCCTGTCATTACTTTTTTCTGGTTTTTTGTGCAAAG
ATGGAGGACAAGATTCTCTAAAGAATGGCTGAAGTGGTTTTTCCCGGAAA
ATTCTTATTCGCCTTAAAAAACGGATTTTCGTATTTCGGGGAAATTCCCT
TTAACCAAATAAGAAAATTTCTCAATGTTGACTCGTTATTTTTTTCTGAT
TTTTTGCACAATGATACAAAATGGCAATGCCTAAAATGTGTCGGAGCCCG
ATTTTTGAAAAAAAATATATTTGGGCAAATTTGGACCAAAAACTGCCTAA
AAATAGGGTTTTTTCGACTTTGTGCAAAATCTTGTCATTACTTTTTTCTG
GTTTTTTGTGCAAAGATGGAGGACAAGATTCTCTAAAGAATGGCTGAAGT
GGTTTTTCCTGGAAAATTCTTATTCGCCTTAAAAGATGGATTTTCGTATT
TTGGGGAAATTCCCTTTAACCAAATAAGAAAATTTCTCAATGTTGACTCG
TTATTTTTTTCTGATTTTTTGCACAATGATACAAAATGGCAATGCCTAAA
ATGTGTCGGAGCCCGATTTTTGAAAAAAAATATATTTGGGCAAATTTGGA
CCAAAAACTGCCTAAAAATAGGGTTTTTTCGACTTTGTGCAAAATCTTGT
CATTACTTTTTTCTGGTTTTTTGTGCAAAGATGGAGGACAAGATTCTCTA
AAGAATGGCTGAAGTGGTTTTTCCTGGAAAATTCTTATTCGCCTTAAAAG
ATGGATTTTCGTATTTTGGGGAAATTCCCTTTAACCAAATAAGAAAATTT
CTCAATGTTGACTTGCATAATTTTTTTCTGATTTTTTTGCACAATGATGC
AAAATGGCAATGCCCAAAATGTGAAGGAGCCAGATTTTGAAGGAAAATTT
TTTTGGGCAAATTTGGGCCAAAAACAGCTTAAAAGGTTTTTTGGGCCTGA
ATGGTTTAAGTGATTTTCGTATTTGGGGANNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNTTATTCAACACACAAGCTTTATTTT
TCCATTCTGAATTTTTGTACAATTATTGTCACTTTTTTCTTATTTTCATC
TGATGTTAATCATTAGGTAGGTCCGTTCAGCATGTTGCTTGTTTTCTTAA
GGATGTACCAAGATCCTTCAATGCGACTATAAGTACAATTTTTAAGAGCT
TTGAACTGAGAAGGTTAAATGTTTTTTCTAAGAAATTTATCCTGGTAACA
AGATACGATCCTGGACAAAACTGGTTGTCCACACCCTTCCCAAATATCGA
TTTTTTGGGGAAAGAGGGGACTTCTCGTTGGAAAAGGGTGATCGGACACC
ATTTTTGACAACAATGGTACTACCCTTATCAAAAGTCTTTATTAACATAA
CTTCGTTTTTTTTCTCCAGGAAAATATTTTGACGAAATCTCACAAGATAC
AGGTCGCTTTTGTTTCGGCGTCGACGACACATTGAAGGTATGTATTTTTC
TTTCCTCGTACGTTGAGCTCTTTTGAAAAAACGATCTGCCTTTTCGCTTC
ACCTGATGCTTTAAGGATGAGAATAGAATAATTACTTATATTTATTGCAT
TTTTCGTTTAGACATTATTTTCCTATAATAAATATTGAAGAATGATGTTT
GTTTTTATCCCTTCAGGCTTTGGAAATGGGAGCTGTTGAAACACTCATTG
TTTGGGAAAATCTTGAAACACAACGTATAACCTTGAAAAATCACAGTTCG
GACGGTAAGGATTGTTTGTTTTATCACTCGTAAATATGCTTCGTAAATGC
AATGCCCTACCTTCGCCGTAAAGATGACTGCCTGTGTGCAAGAGGCTCAA
ATAAAGATTAGATACCAACTTTCGAAAAAAAAGTTTAACCAGGACATAAA
ACAGATATATTTTCAAATTAGAGTTTGTTCCCAGCACAATCTAATATTTG
CTTCTTTATTACAAGGAATCATTGTTTGAAAATGTTGTATCACTAAAATC
CAGAATTTTTACCCATAGCTACGAAAAGAAGACTTCAATAATTATTTTAA
GACAATTTCTTTTTCAAGACTTACGAACTTATGACTGCAAAAAAAATTTT
AACGCCTGAACAGACAGGATTAAGCTTCACACAAGCCTGTAAATTCCTAT
ACTGGGTGCACCAAAAAAAGATATACAGGTTTCTCGAGATATAGTGAGCT
TCAGGATTTATATTTTTTGTTCATTCTTTTTTTATTGTATAGAGGATGCT
CTAACTTGAATTTTGAGCTATTATACATTAAATTTGAAAAGTAGTTCGAA
AGTTATTTCCAACAAACTGACTTTTTTTCCATGTCGAAATTTCAAAAAAA
TCATTAAAAACAGCAATCATGCTATAAATAAGTCAAAATGACAAAAACAC
AATTTCATTGTTTTTTTTTATTCTTTTTTCTCCTATCTTATATTTTGCCA
GCAGTTTGCCATCTTATTTGTCATGAACATTTCCAACACCAGCAAACTCA
ATGCAGAACCAAGTCCTTTAAGCAACTACCTTAAGTGGATAAATTTTGGC
GGGGATTAAATTTGGCGAATTTTGATAAAATTCGCCAAAGTAAATCCTCG
CCTAAATTTCAAAAATCGGCCATTCGCCAAATTAAATCCCCGCCAAATTT
CACAAAATTGATCAATCGCCAAATTAAATTCACGACAAAATTAATCCACT
TAAGGTTGACTCGACTAGGAATGGTGATCTATTTTTCAAAACTTTTCTCA
CATAGCATACACACATAACATCAAAACCTCTCTTGGAGATTTACAAAAAA
AAATTCAGCTTTGAGTATTTGGATGGGTCACAGGCAAGAAACAACAAAAA
TTTATTTATTCATTGATAAATTTTCCCCCTACTCTATGGTAGAGCATCTT
CAGATCTAACATAACTCATAAAAAAAACCTATCTTATAGCATCTAGCATC
TTCAGACATTTGATTAAAAAATTATTTTTATTCCCTAGATAAAAAATTAA
TTAAGTTATTCTTATGAACAATAAAATCATTAATAAAAANNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNATAAGAATAACTTAATTAATTT
TTTATCTAGGGAATAAAAATAATTTTTTAATCAAATGTCTGAAGATGCTA
GATGCTATAAGATAGGTTTTTTTTTTATGAGTTATGTTAGATCTGAAGAT
GCTCTACCATAGAGTAGGGGGAAAATTTATCAATGAATAAATAAATTTTT
GTTGTTTCTTGCCTGTGACCCATCCAAATACTCAAAGTTTTAATAATGGA
AAGGCAATCACTGAAGAGTTTTATAACAAAAATTCAGCTTTTCCAAAAAT
ATCACCCACATAGGAATATCTTGTTTTACCAAATTCTTATATTTCGTAAC
GAGTTTTGATGAACACAGTTGTATTTTTTGGTATTTTTATCTGTAAAGAA
GGTAAAGTGTCAAGAGAAAAGTTTGCTTGCTGTTTTTGATGATTTTTTGA
AATTTCAACATTAAAAAAAAGTCAGTTTTTTGAAATAATTTTCGAATTAC
TTTTTCAAACCTAATGCATGATAGCTCAAAATTCAAGTTAGAGCATCCTC
TATGCGATAAAAAAAAATGAACAAAAAATATAAATCCTTAAGCTCACAAT
ATCTCAATAAAGTCGTATACTTTTTTTTGGTGACCCGGTATACCGAGTTA
CTAATTGTTTTTCTTTTATAGATAATAACATTTTGCTACTGAATCCTGAA
CAAGAAAAAGATAGAACAAACTTCCTGGATAAGGAAGTAAGACTTTTATA
ATAAATCATTAGTCATAATCGTTTGTGAAATTTTGCGATTGTGAGTAATT
TCTTTTGAGCTTTTATGCTTCATGGTTTCAGCCCTCTCCCAAATTTTTCA
TCGTCATAATATTTTCATAATTACTTTCTTGCATAAGCTTAAAAAAGAAA
AATGATTTTAAATGAATGCTCTGACCATTGCTATATAACTTACTTCTGTA
ATTTAGTGTCAGTTTTAACAATAAAGGCCGGTCATATCAACTTAAAATTT
TATTCCACCATAGACTAACGTTGAGTTGGAAATATTGGACAAAATGCCGC
TCTTGGAATGGCTTGCTAATAATTACAAATCCTTCGGTAGGTTTACGAAC
ATTCTTTCGAATCATTTCTGCTTACAATTGCCTTAAGACAAAAGTTTTAA
AACACTCATAAATTTAGGAACGCGTAAAAGTGTTTTAACGAGTTTGAACA
AAACCCACGAAATTCGCCAAAATTACTTTTTGCTGAAATCAGTTCCCTTA
GGTATCTTTCTAAATAAAACAAGAGACTGATTGTGGTAATTTTCTTTGCA
AAGGTGCTGCATTGGAAATCGTTACAGATCGTTCACAAGAAGGCTCGCAA
TTTTGTCGTGGTTTCGGTGGTATTGGAGGTGAGACTTCTTCCCTCTCCGA
TAACTGTTATCATTAATTTTCTAAACACTTACTGCCACTTAAACGATGAC
ATGTGATGGTAGATATTAAGTACCCGGGAAATTTTGTAACATGCGAAATT
TAATACCATTTTAAAGGTACACTCTTGTTTCATAAGAACCAGTAATTTTT
TAATTGCGACTTAGCTGTACTTATATTTTGTCACTTTGAGCCTCAATGGT
GTAATCGTGCTTTTTTTGACGAGTTTGAGCCTGCTTCTCATAAGATTGTT
CTTATAAAAAAAACCATGTTCGATTTGAATTCAGATTTTGAAACACAATT
TTGTGAGCCTGTAAACAAATACCAGAAGGAACATTATTTTTTTCTGAGAT
TTTTGAGCCAATATAATTGTCTCCGCGACCACGGTGAGTTATATATGAAT
CTCTTTTATCACCAGTAGAATGGTATATAAACAAAAATATGTACAGGTTA
AAAAGAAGAAAATTATGTTATGAAAGGTTCATTCTCATTTTAGGCTAGTA
CTCAACGAACCGTTATGTAACCTAGGTATTGGCATTTTATTTTTACTTTT
CAATCGTCAGGTTTACTGCGGTACAAAGTGGACTTTCAATCGATGGACTA
CGATGATTTGGATGACCTTGACTATTACGATGATGACGATGAATCTCTCT
TCTAAATAGTGAACAAAAAATGAAAGATTTTATCAAATCATCCCATCATC
GGTATAAATACACAGAAAGTGCAATACAGTGAAGTTTCATTACGAAACGC
CATTGAACTGTTGATACCGAAGAGCAACTGAATGGTTCCATCCTATGGCT
GGTGGCACGAAAAACAGTTCGCTTTTAATGATTTTGACGTTAAAGATGGG
GGTGTCTCCTCTATAAGTGAAACAAACGACGACCTAATGACGTTTCAGCA
ATAACTGTAGAAGACAAGAAAGAAGCCTTTGAATAGGCTCATCAGAAACG
AGGGCGATATTTTATTTTTGAAAATCGAGATTTTATTTTATTTGGTTTTT
ATTGTAGTTCTCCATTGTTGTTTTTTCTTATTTGTTCGCCATTCTCCAAA
AAGACTTTTATCGTGAAAAGTCCAAGACAAGGTTTTTACAAATTCGCCGA
CGTAGATTCCAATGAAAACCAGAATGTTATCTCTCATTTAGCATGACCTT
AAATAGTAAAGTAAATTTTGTGTTTTATTACTGGGCATTTGTATTTTTGT
GTATTTATTCAGATAATTTCAGAATAACAGAATTGTGTCAATCGTTCATA
TTTGTCTGACTTCCAATTTAAGAGTTGCCTAACGACTACCCAACGAGGGT
TGTTCCAGAAGCTTTTTTTTATATATATTCTAAAAAACATCGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007198XLOC_007198Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012839-exon-sc0000156-1575043694:352688..352828TCONS_00012839-exon-sc0000156-1575043694:352688..352828Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1575043694:352428..352544TCONS_00012839-exon-sc0000156-1575043694:352428..352544Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1575043694:351556..351614TCONS_00012839-exon-sc0000156-1575043694:351556..351614Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1575043694:350113..350252TCONS_00012839-exon-sc0000156-1575043694:350113..350252Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1575043694:348588..348726TCONS_00012839-exon-sc0000156-1575043694:348588..348726Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1575043694:347026..347138TCONS_00012839-exon-sc0000156-1575043694:347026..347138Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1575043694:346688..346765TCONS_00012839-exon-sc0000156-1575043694:346688..346765Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1575043694:346326..346391TCONS_00012839-exon-sc0000156-1575043694:346326..346391Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1575043694:346101..346164TCONS_00012839-exon-sc0000156-1575043694:346101..346164Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1575043694:344292..344359TCONS_00012839-exon-sc0000156-1575043694:344292..344359Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1575043694:344025..344112TCONS_00012839-exon-sc0000156-1575043694:344025..344112Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1575043694:340693..340757TCONS_00012839-exon-sc0000156-1575043694:340693..340757Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1575043694:340343..340415TCONS_00012839-exon-sc0000156-1575043694:340343..340415Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1575043694:340051..340125TCONS_00012839-exon-sc0000156-1575043694:340051..340125Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1575043694:338684..339468TCONS_00012839-exon-sc0000156-1575043694:338684..339468Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1510915933:352688..352828TCONS_00012839-exon-sc0000156-1510915933:352688..352828Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1510915933:352428..352544TCONS_00012839-exon-sc0000156-1510915933:352428..352544Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1510915933:351556..351614TCONS_00012839-exon-sc0000156-1510915933:351556..351614Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1510915933:350113..350252TCONS_00012839-exon-sc0000156-1510915933:350113..350252Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1510915933:348588..348726TCONS_00012839-exon-sc0000156-1510915933:348588..348726Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1510915933:347026..347138TCONS_00012839-exon-sc0000156-1510915933:347026..347138Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1510915933:346688..346765TCONS_00012839-exon-sc0000156-1510915933:346688..346765Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1510915933:346326..346391TCONS_00012839-exon-sc0000156-1510915933:346326..346391Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1510915933:346101..346164TCONS_00012839-exon-sc0000156-1510915933:346101..346164Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1510915933:344292..344359TCONS_00012839-exon-sc0000156-1510915933:344292..344359Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1510915933:344025..344112TCONS_00012839-exon-sc0000156-1510915933:344025..344112Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1510915933:340693..340757TCONS_00012839-exon-sc0000156-1510915933:340693..340757Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1510915933:340343..340415TCONS_00012839-exon-sc0000156-1510915933:340343..340415Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1510915933:340051..340125TCONS_00012839-exon-sc0000156-1510915933:340051..340125Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1510915933:338684..339468TCONS_00012839-exon-sc0000156-1510915933:338684..339468Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1491911889:352688..352828TCONS_00012839-exon-sc0000156-1491911889:352688..352828Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1491911889:352428..352544TCONS_00012839-exon-sc0000156-1491911889:352428..352544Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1491911889:351556..351614TCONS_00012839-exon-sc0000156-1491911889:351556..351614Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1491911889:350113..350252TCONS_00012839-exon-sc0000156-1491911889:350113..350252Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1491911889:348588..348726TCONS_00012839-exon-sc0000156-1491911889:348588..348726Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1491911889:347026..347138TCONS_00012839-exon-sc0000156-1491911889:347026..347138Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1491911889:346688..346765TCONS_00012839-exon-sc0000156-1491911889:346688..346765Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1491911889:346326..346391TCONS_00012839-exon-sc0000156-1491911889:346326..346391Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1491911889:346101..346164TCONS_00012839-exon-sc0000156-1491911889:346101..346164Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1491911889:344292..344359TCONS_00012839-exon-sc0000156-1491911889:344292..344359Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1491911889:344025..344112TCONS_00012839-exon-sc0000156-1491911889:344025..344112Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1491911889:340693..340757TCONS_00012839-exon-sc0000156-1491911889:340693..340757Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1491911889:340343..340415TCONS_00012839-exon-sc0000156-1491911889:340343..340415Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1491911889:340051..340125TCONS_00012839-exon-sc0000156-1491911889:340051..340125Clytia hemisphaericaexon
TCONS_00012839-exon-sc0000156-1491911889:338684..339468TCONS_00012839-exon-sc0000156-1491911889:338684..339468Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000156supercontigsc0000156:338684..352828 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
53.0501	38.5444	36.2872	64.1705	13.0902	49.7081	22.8223	81.1087	137.169	121.581	133.041	215.417	188.682	173.276	215.496	209.961	177.38	197.803	53.7061	91.7297	154.702	182.632	63.1436	95.3851	66.7089	61.2494	129.216	127.709	97.6643	59.353
Blast
[Close]
BLAST of TCONS_00012839 vs. Swiss-Prot (Human)
Match: ERF1 (Eukaryotic peptide chain release factor subunit 1 OS=Homo sapiens GN=ETF1 PE=1 SV=3)

HSP 1 Score: 742.265 bits (1915), Expect = 0.000e+0
Identity = 353/422 (83.65%), Postives = 387/422 (91.71%), Query Frame = 2 
Query:   56 MSGQEQETDRNVEIWKIKKLIKSLQAARGNGTSMISLIIPPKDQISRIAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTSEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLEDDSKFGFIIMDGNGALFGTLCGNTRDVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAETAVQMFISNDKINVAGLVIAGSADFKSELSQSDMFDGRLQAKILKVVDVSYGGENGFNQAIELSAEVLSNVKFIQEKKLIGKYFDEISQDTGRFCFGVDDTLKALEMGAVETLIVWENLETQRITLKNHSSDDNNILLLNPEQEKDRTNFLDKETNVELEILDKMPLLEWLANNYKSFGAALEIVTDRSQEGSQFCRGFGGIGGLLRYKVDFQSM 1321
            M+      DRNVEIWKIKKLIKSL+AARGNGTSMISLIIPPKDQISR+AKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVT EGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALL DDSKFGFI++DG+GALFGTL GNTR+VLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAETAVQ+FIS DK+NVAGLV+AGSADFK+ELSQSDMFD RLQ+K+LK+VD+SYGGENGFNQAIELS EVLSNVKFIQEKKLIG+YFDEISQDTG++CFGV+DTLKALEMGAVE LIV+ENL+  R  L    +++  IL L PEQEKD+++F DKET  E E+++ MPLLEW ANNYK FGA LEIVTD+SQEGSQF +GFGGIGG+LRY+VDFQ M
Sbjct:    1 MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGM 422
The following BLAST results are available for this feature:
BLAST of TCONS_00012839 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ERF10.000e+083.65Eukaryotic peptide chain release factor subunit 1 ... [more]
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