XLOC_006964 (gene) - C. hemisphaerica

Overview
NameXLOC_006964
Unique NameXLOC_006964
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000144:178308..183949+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006964 ID=XLOC_006964|Name=XLOC_006964|organism=Clytia hemisphaerica|type=gene|length=5642bp|location=Sequence derived from alignment at sc0000144:178308..183949+ (Clytia hemisphaerica)
AggaagaaataaaacaaaataaataaaaaacaaagaagtgCAGACGTCAG TGCAGACGAGTTACACCACTGAATCCGTAACATTCCAATCGTTTCAAGAT AGTGGTTTGGCTTGATCAATTTTGTCTCTTAGATTAAACAATGTTGCCAC TTTGACCGTTTTGGTTCAAGCTTTGATCAGGTTGGCTTCTATTATTATAT AAAGACAGACATTTTAGGAGCTTTTATAAATCAGTAAATGCAAAAAATAA AGGATCTATCAAAGTAGATAAATACTGCATTTTACGTACTTTTTCTTTTA GGGGTGTAAAAAAGCAGGTGGTACTCCAGAGGAAATATCTTGAGTTGATC TTTATTACGTAAAGTTTCATTGGTGAAATCTTTGTGATTTTCCGTAGGAC AataaatgttgcatttttgtcAATAGGTCTGAAAAATAGGAGGGGTgcat taaaaagcttttttctaaaGGTTTCCATCTTGACCCTTAGCACCTGACGT CATAAAAACCATTTTCATGAAATTCCCATGCACGGCGTCTATTTTTCTCT AAACCACGTGTTACCAACCCGTCCAGGATCAGTAATTTTTACCACTTGCA CCAACCATTAGTGATCTATTCCGCCTAAATTAGCTGTTCTTTGACAACCA gttgttttttgacaaaattgaaataagACTGCCTATAAAAGTCCTAACCC GGGACCATCGGGTGTTAGTCAATGTACTTTCTTTGCCAGGTAAACGGCTG ACGACTGCTAGGTTCACTATGAAAAGGTCCTTCGTTCTTTAATACATTAT ACCTCTTCTTACCTTTTAGCAAATACGAAATAAATCaatattgaaaaatt aagaGAAGTATAAATTATGAACCAACATGAACGAAAAAGCCGACGTCACG CGCAACAACCACACGATGACGTCACCACAGAACAAATTGCAGAAGACCAG GAAACACCAATCGATTACTTGAGTCGTAACAACCACACCACCCTCATCAA AGATGCTGTTAAAGTCTTGTTAGCTAACCGCCCCGATGACCCTTTACAAT TCTTAGTCGATTTCTTTGCCCCTAAAACACAAACGACCATCATTGAGAAA GCTTATGATAAATTGTGCTGGACTGATTACTCAATGCCGGTGTATCAGAG AAATGTTCTCGAAGTTTACGATCAATTAACGGCCATGAAAAATGAGGATA CTCATTTGAAAGGTCTGCTCGGTATTCGGTTTAACGAACTTTTAGAGAAA CTCGCTAACGATCTCCCAGAAGTCTTTGCAGAGGGGGTTTACCTGCGTGT GAAAACGAGGCAGGATCAAGTGATATCTTTTCGCCGTTTTTATCACAGTA TTTTGTTGATGCatgttttaaaagattttgtctcGCTTATCAAAGCAATG CACAAAGATTTAGATGTCCAAGACTTTGGGAAAGTGAGTCAAAAGCTGTG TTCGCTGGTTGTTGAGCGGTTATTTGAATCCTTTAACAGTGAATCAACCA CTCTTGGTAATGACAGATTGTTTGCCAGCACCTTTCTTGAGAATGCAGAA TccactttgatgaatgaaaaagaaTCTTTGAGCGAACAAGATTTCGTGAA ACTTTGCATAGATCAATTTTTGGATTATGTCGTGTAAGAAGAGGCCTGCG ATAATTGTGTGGtgatgtttttgttcttttattttctcattatttcACCA GCCAATTGATCTGGTTTTCCTGGGactttccgaaaaaaatattggGGCTA ACTCAGCTTTTGACGGTCATTCTAACCTCACTCGTGAACCATGTGtttaa tcttttattttattttatttttagagcTGATAGAGTGACATTTCCCTTCC CTCATGTTGGGCCTGGGGGGTACTGCTAGCTCTTAAACAAAGTGATAAAC ACGGGACATTGACTTTATTACCATGATATTAATTTTGTTAAGGAAATGTC TTCACGTTGAcctttcttttttcaatcatttgGTAGACAAACATCTTTAC ACCTTTATACGTCACTCCATCCTGAGTAACAATGTACATTCTAGGCTGAT TTGAAGGACTGATCAGTTGCTGCACCAAAGTTGTTGCGTTTTGTTTCTAG TACATTAGAgggtttttctttcttcttaacACATCAATTCTGTTGCGGTG CTCTCAATCGTTCAACTTCGAAAGTCTTTTTCATATAATGCCGTCTTTCT TATTCTATTCTGACcccttcagttaaaaaaaatatacaggATACCAGAAT ATCTTATACTGCATAATTATATGCCTCCCTCTAATCTTACCACAAACAGT CTTGGCTTCAGGTTGAGAATCTCTAGCGATTATTTGCTGCTCATAACCCA CACTTCGGGTTGACACCTTTCCTTCTTACTAAAATATAAACCAAGTCTGA GTGGAAAAAGAGCTCAGCCACTTTAAACACACAAAGCACGCAACAACTGC TCATGTGCTTATCTGATATATCTGATATTTCGATGGTTATCTGACATTct gatggcgtattggcggtcACCGCGCTTAATTCTATACATATTGTTAATAT TCGTGacataatcttttatacggaaacacccgaagAAGACCGGGCATTTG CCACCAGTACCACTCTAGTACCATCTTGTCTGGCCTTGATGAAAATGTCT GAATCCCTTGTTGATATCCCCTTTGCAAGAAGGCCTTTACCGACACTTTC TATGCCACTACACCACTGAcctatatatccctggaccaagctatatttgc catctttgatcgaagtttttttttgaattggtatctgtaaagaagccatt gcagtgttaaaattaacgtctaacggcgctacatcatcaaaagtttttga gGGGAAGTAggtctagcgctctcgatgcatttacaccgctattgagtagt gctgccattagggtaccacttttcaaaaaactccgatcaaagattttgct tggccgggattgagaagcttggtctAGGGACCTAGATGGTCTAGACCCAA CGTTTGGTTCTCTATCAAAGGATGTTCTTACCCCTTGGAGTTCATTAACA AAAATGGCCTTGGGCCTATTAGAATTGGGTTTGCTACGCACAACTCCAAA ATCTGGTTGTATCACGATTGAGCTGGCAAATGTGGGGTCAACAAAGTTTG AGTTGCTTGTTCTGACTTTAGTTTTGAAGGTGTTTTCCCTATGAGACAAA CGGTGGGACTTTGGTCTTTCCAATTCAATTGAAATGCATCTACTGCTTGA CTTATTGGATCTGGCTTTCGTCTAGTTGCCATTCGCTAGAATCGTGGAAA TTTCTGGATTCCCAATCTGCCACAAAGTTGTAAATCCCTGGAAGGTGTTC TGCTGTAATCATGATCCCTTGGTTCAGTGCTAATTCCCATATCTCTTTGG ACAATGAAACCATCTCCTAGTTCCTTGTCCCGCCCATATTTACAAGGTAT GCTACCCATGCTAGGGCTGATATGTTGTCCGTTTGAAAGTGGACATTCTT CAATGTGAATATTTCGTAATAAGTTAACAAGGTAAGGTGAATGGCTTTCA TATCTGTTCTTTTCTCTAGAAGAGTCTAGCGCCCCCTGTCCTTTGGTTCT AACAAAAAGCTCAAAAGGCTTCTGTCTGGATCACTATTTTTCTGGAGGGT TTCAACAGGGACCTTTCTTTAGATTGATCATTCATCATTCCAGCTCCTGC ACATTGTTTTCGTTCAGAGCTGGGAACTCTGACTCTGTTTGGTCATCTGG ATATACTGATGTTGAAGTTATCGCATCTGAAGAAAAGTCGAAAGAACAGC CTGAGCTGTTGAGCAAAGATGACCTAAGAAACTTGCTATTTCCCCTAAGT TTGTTTGATGATGTTTGATTAACATGTTTGAGATTGTGTACTTTCACCTT TGGCAGTGTCAGGGGCATTTCCACAAGTCGAAAGAACAGCCTGAGCTGTT GAGCAAAGATGACCTAAGAAACTTGCTATTTCCCCTAAGTTTGTTTGATG ATGTTTGATTAACATGTTTGAGATTGTCTACTTTCACCTTTGGCAGTGTC AGGGGCATTTCCACAGAGTCCACTCTTCTGACATGGGGTCAGAACAGATT TCTTTAAATTTATGGCATAAATCCCAGGTGCTGAACATTTTCGAAAATGT GGTCAAGTTCTACCTCTCCTCTCCGACGTCGTTCTTCCGTTAACTCCTTG AAGTGCTCGTCCATTTTTGGCGCCTTGCACAAAAAGTTCTTAAGTATTGT TCTTGTCTTTAAGCTATTTCTCTTTTACaaattgcagaaaaaaattGCGA GCATAAGAATTCATTTCATCTGATAATGGCCAGTCGGCGTCCTCAGCTTC CGGTTTTAATCTTCTTCTTTATAAAAGAAATGCTTTGTGaaggaatttca ttttcatgtagagGTCATTTTCCCCCAGGGGACCACAGTGATCCCAGTGA TCCTCTGGGTGGACGACATGATTTGTTGCTACCCTCCTCGCCTCCTCAGA TGGATTGACCATGCTCGACTCCCTCGACTCACAGCAGGGTTTTCGAAAAG TGTTTCTCAAAAAGTAGAAATAAAGGACAATAAGGGAAATATGTATTCTC TTCACCGTTTGTTATTCAATTCCGAGCTCCTTTTGTCAACCATTTGTTCA ACTAGTGAATTTAACTGGATGTTATCACAACTTTAGGCTATAACTACCAA CCTCCTCCCTTAATAAATTGAAAGCCTTTAATGCAGTATTGTGGAAAACG AGGAATGAGGCTCTTGAGTTATGGATGAAACCTGGTTATGgttcatgatg aaatgaaaaaatagacACAGTGACCCGGCCGTGatttgaacacgcaacct tctgatctggagtcagacgcgctaccattgcgccaccaAGCCACACTTAT TCATACATGTCTCTCTATTTAAATCATTAACATGTTGTTGCTATGGTTTC TCATGAAATCTGTTACCATGGGGGCATTTGATTGACAGCTTCATTGATAT TACTACCGCTCTAAATACGAAACCACAGAATAACGATTAATATTTTAAGG CAAAGCTAATTCAGGAACCGTGGCTtggtggcgcaatggtagcgcgtctg actccagatcagaaggttgcgtgttcaaatCACGTCCGGGTCACTGtgtc ttttgtttatttcatcGGGCAATCTATATTAACCCGACTTCGACCCCCGA CCCTCGGCTTTTTCCAAGGGGAGGAAAGGCCTTTTTCTAGGGTCGCGGTC GAGGTCGGATTAGTATTAGATTGCCATTTCATCGTGACCCAAGAGCAAGC GtgccaattttttctttttgacggTACGATAGGGACGACGTTCGGATGTT TTTCATCGCGAGGCATAGGCTGTTTTTACGCACTTccagtttttataaaa tttgtgaactagaactgcctagggtcaatggcccagaaggcttaagtgac actgcgcacttctgactttttgtcaGGGCGGAAAATTTCCAAGTGAGCGG CCCGcgcgatgaaatttttttcggtctttaAAATAAATGTCGAGTTATGC AAAATGGGTTAACATTTCCGAGTTGTTCATACTTCATATCAAGAGTTACA GGTTAAAATTTCTGAGTTAAGTGCTGGTCAgcaaaatccccc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012384TCONS_00012384Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00012384-proteinTCONS_00012384-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000144supercontigsc0000144:178308..183949 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.32 0.36 0.48 0.42 3.15 2.52 2.65 2.93 1.06 1.47 1.13 1.04 0.81 0.82 0.81 0.82 1.02 0.9 0.68 0.61 0.77 0.76 0.55 0.6 2.3 2.44 0.35 0.41 0.31 0.43