TCONS_00012384 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012384
Unique NameTCONS_00012384
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5003

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012384 ID=TCONS_00012384|Name=TCONS_00012384|organism=Clytia hemisphaerica|type=transcript|length=5003bp
AggaagaaataaaacaaaataaataaaaaacaaagaagtgCAGACGTCAG
TGCAGACGAGTTACACCACTGAATCCGTAACATTCCAATCGTTTCAAGAT
AGTGGTTTGGCTTGATCAATTTTGTCTCTTAGATTAAACAATGTTGCCAC
TTTGACCGTTTTGGTTCAAGCTTTGATCAGCAAATACGAAATAAATCaat
attgaaaaattaagaGAAGTATAAATTATGAACCAACATGAACGAAAAAG
CCGACGTCACGCGCAACAACCACACGATGACGTCACCACAGAACAAATTG
CAGAAGACCAGGAAACACCAATCGATTACTTGAGTCGTAACAACCACACC
ACCCTCATCAAAGATGCTGTTAAAGTCTTGTTAGCTAACCGCCCCGATGA
CCCTTTACAATTCTTAGTCGATTTCTTTGCCCCTAAAACACAAACGACCA
TCATTGAGAAAGCTTATGATAAATTGTGCTGGACTGATTACTCAATGCCG
GTGTATCAGAGAAATGTTCTCGAAGTTTACGATCAATTAACGGCCATGAA
AAATGAGGATACTCATTTGAAAGGTCTGCTCGGTATTCGGTTTAACGAAC
TTTTAGAGAAACTCGCTAACGATCTCCCAGAAGTCTTTGCAGAGGGGGTT
TACCTGCGTGTGAAAACGAGGCAGGATCAAGTGATATCTTTTCGCCGTTT
TTATCACAGTATTTTGTTGATGCatgttttaaaagattttgtctcGCTTA
TCAAAGCAATGCACAAAGATTTAGATGTCCAAGACTTTGGGAAAGTGAGT
CAAAAGCTGTGTTCGCTGGTTGTTGAGCGGTTATTTGAATCCTTTAACAG
TGAATCAACCACTCTTGGTAATGACAGATTGTTTGCCAGCACCTTTCTTG
AGAATGCAGAATccactttgatgaatgaaaaagaaTCTTTGAGCGAACAA
GATTTCGTGAAACTTTGCATAGATCAATTTTTGGATTATGTCGTGTAAGA
AGAGGCCTGCGATAATTGTGTGGtgatgtttttgttcttttattttctca
ttatttcACCAGCCAATTGATCTGGTTTTCCTGGGactttccgaaaaaaa
tattggGGCTAACTCAGCTTTTGACGGTCATTCTAACCTCACTCGTGAAC
CATGTGtttaatcttttattttattttatttttagagcTGATAGAGTGAC
ATTTCCCTTCCCTCATGTTGGGCCTGGGGGGTACTGCTAGCTCTTAAACA
AAGTGATAAACACGGGACATTGACTTTATTACCATGATATTAATTTTGTT
AAGGAAATGTCTTCACGTTGAcctttcttttttcaatcatttgGTAGACA
AACATCTTTACACCTTTATACGTCACTCCATCCTGAGTAACAATGTACAT
TCTAGGCTGATTTGAAGGACTGATCAGTTGCTGCACCAAAGTTGTTGCGT
TTTGTTTCTAGTACATTAGAgggtttttctttcttcttaacACATCAATT
CTGTTGCGGTGCTCTCAATCGTTCAACTTCGAAAGTCTTTTTCATATAAT
GCCGTCTTTCTTATTCTATTCTGACcccttcagttaaaaaaaatatacag
gATACCAGAATATCTTATACTGCATAATTATATGCCTCCCTCTAATCTTA
CCACAAACAGTCTTGGCTTCAGGTTGAGAATCTCTAGCGATTATTTGCTG
CTCATAACCCACACTTCGGGTTGACACCTTTCCTTCTTACTAAAATATAA
ACCAAGTCTGAGTGGAAAAAGAGCTCAGCCACTTTAAACACACAAAGCAC
GCAACAACTGCTCATGTGCTTATCTGATATATCTGATATTTCGATGGTTA
TCTGACATTctgatggcgtattggcggtcACCGCGCTTAATTCTATACAT
ATTGTTAATATTCGTGacataatcttttatacggaaacacccgaagAAGA
CCGGGCATTTGCCACCAGTACCACTCTAGTACCATCTTGTCTGGCCTTGA
TGAAAATGTCTGAATCCCTTGTTGATATCCCCTTTGCAAGAAGGCCTTTA
CCGACACTTTCTATGCCACTACACCACTGAcctatatatccctggaccaa
gctatatttgccatctttgatcgaagtttttttttgaattggtatctgta
aagaagccattgcagtgttaaaattaacgtctaacggcgctacatcatca
aaagtttttgagGGGAAGTAggtctagcgctctcgatgcatttacaccgc
tattgagtagtgctgccattagggtaccacttttcaaaaaactccgatca
aagattttgcttggccgggattgagaagcttggtctAGGGACCTAGATGG
TCTAGACCCAACGTTTGGTTCTCTATCAAAGGATGTTCTTACCCCTTGGA
GTTCATTAACAAAAATGGCCTTGGGCCTATTAGAATTGGGTTTGCTACGC
ACAACTCCAAAATCTGGTTGTATCACGATTGAGCTGGCAAATGTGGGGTC
AACAAAGTTTGAGTTGCTTGTTCTGACTTTAGTTTTGAAGGTGTTTTCCC
TATGAGACAAACGGTGGGACTTTGGTCTTTCCAATTCAATTGAAATGCAT
CTACTGCTTGACTTATTGGATCTGGCTTTCGTCTAGTTGCCATTCGCTAG
AATCGTGGAAATTTCTGGATTCCCAATCTGCCACAAAGTTGTAAATCCCT
GGAAGGTGTTCTGCTGTAATCATGATCCCTTGGTTCAGTGCTAATTCCCA
TATCTCTTTGGACAATGAAACCATCTCCTAGTTCCTTGTCCCGCCCATAT
TTACAAGGTATGCTACCCATGCTAGGGCTGATATGTTGTCCGTTTGAAAG
TGGACATTCTTCAATGTGAATATTTCGTAATAAGTTAACAAGGTAAGGTG
AATGGCTTTCATATCTGTTCTTTTCTCTAGAAGAGTCTAGCGCCCCCTGT
CCTTTGGTTCTAACAAAAAGCTCAAAAGGCTTCTGTCTGGATCACTATTT
TTCTGGAGGGTTTCAACAGGGACCTTTCTTTAGATTGATCATTCATCATT
CCAGCTCCTGCACATTGTTTTCGTTCAGAGCTGGGAACTCTGACTCTGTT
TGGTCATCTGGATATACTGATGTTGAAGTTATCGCATCTGAAGAAAAGTC
GAAAGAACAGCCTGAGCTGTTGAGCAAAGATGACCTAAGAAACTTGCTAT
TTCCCCTAAGTTTGTTTGATGATGTTTGATTAACATGTTTGAGATTGTGT
ACTTTCACCTTTGGCAGTGTCAGGGGCATTTCCACAAGTCGAAAGAACAG
CCTGAGCTGTTGAGCAAAGATGACCTAAGAAACTTGCTATTTCCCCTAAG
TTTGTTTGATGATGTTTGATTAACATGTTTGAGATTGTCTACTTTCACCT
TTGGCAGTGTCAGGGGCATTTCCACAGAGTCCACTCTTCTGACATGGGGT
CAGAACAGATTTCTTTAAATTTATGGCATAAATCCCAGGTGCTGAACATT
TTCGAAAATGTGGTCAAGTTCTACCTCTCCTCTCCGACGTCGTTCTTCCG
TTAACTCCTTGAAGTGCTCGTCCATTTTTGGCGCCTTGCACAAAAAGTTC
TTAAGTATTGTTCTTGTCTTTAAGCTATTTCTCTTTTACaaattgcagaa
aaaaattGCGAGCATAAGAATTCATTTCATCTGATAATGGCCAGTCGGCG
TCCTCAGCTTCCGGTTTTAATCTTCTTCTTTATAAAAGAAATGCTTTGTG
aaggaatttcattttcatgtagagGTCATTTTCCCCCAGGGGACCACAGT
GATCCCAGTGATCCTCTGGGTGGACGACATGATTTGTTGCTACCCTCCTC
GCCTCCTCAGATGGATTGACCATGCTCGACTCCCTCGACTCACAGCAGGG
TTTTCGAAAAGTGTTTCTCAAAAAGTAGAAATAAAGGACAATAAGGGAAA
TATGTATTCTCTTCACCGTTTGTTATTCAATTCCGAGCTCCTTTTGTCAA
CCATTTGTTCAACTAGTGAATTTAACTGGATGTTATCACAACTTTAGGCT
ATAACTACCAACCTCCTCCCTTAATAAATTGAAAGCCTTTAATGCAGTAT
TGTGGAAAACGAGGAATGAGGCTCTTGAGTTATGGATGAAACCTGGTTAT
GgttcatgatgaaatgaaaaaatagacACAGTGACCCGGCCGTGatttga
acacgcaaccttctgatctggagtcagacgcgctaccattgcgccaccaA
GCCACACTTATTCATACATGTCTCTCTATTTAAATCATTAACATGTTGTT
GCTATGGTTTCTCATGAAATCTGTTACCATGGGGGCATTTGATTGACAGC
TTCATTGATATTACTACCGCTCTAAATACGAAACCACAGAATAACGATTA
ATATTTTAAGGCAAAGCTAATTCAGGAACCGTGGCTtggtggcgcaatgg
tagcgcgtctgactccagatcagaaggttgcgtgttcaaatCACGTCCGG
GTCACTGtgtcttttgtttatttcatcGGGCAATCTATATTAACCCGACT
TCGACCCCCGACCCTCGGCTTTTTCCAAGGGGAGGAAAGGCCTTTTTCTA
GGGTCGCGGTCGAGGTCGGATTAGTATTAGATTGCCATTTCATCGTGACC
CAAGAGCAAGCGtgccaattttttctttttgacggTACGATAGGGACGAC
GTTCGGATGTTTTTCATCGCGAGGCATAGGCTGTTTTTACGCACTTccag
tttttataaaatttgtgaactagaactgcctagggtcaatggcccagaag
gcttaagtgacactgcgcacttctgactttttgtcaGGGCGGAAAATTTC
CAAGTGAGCGGCCCGcgcgatgaaatttttttcggtctttaAAATAAATG
TCGAGTTATGCAAAATGGGTTAACATTTCCGAGTTGTTCATACTTCATAT
CAAGAGTTACAGGTTAAAATTTCTGAGTTAAGTGCTGGTCAgcaaaatcc
ccc
Run BLAST on NCBI

protein sequence of TCONS_00012384-protein

>TCONS_00012384-protein ID=TCONS_00012384-protein|Name=TCONS_00012384-protein|organism=Clytia hemisphaerica|type=polypeptide|length=256bp
MNQHERKSRRHAQQPHDDVTTEQIAEDQETPIDYLSRNNHTTLIKDAVKV
LLANRPDDPLQFLVDFFAPKTQTTIIEKAYDKLCWTDYSMPVYQRNVLEV
YDQLTAMKNEDTHLKGLLGIRFNELLEKLANDLPEVFAEGVYLRVKTRQD
QVISFRRFYHSILLMHVLKDFVSLIKAMHKDLDVQDFGKVSQKLCSLVVE
RLFESFNSESTTLGNDRLFASTFLENAESTLMNEKESLSEQDFVKLCIDQ
FLDYVV
Run BLAST on NCBI

transcript from alignment at sc0000144:178308..183949+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012384 ID=TCONS_00012384|Name=TCONS_00012384|organism=Clytia hemisphaerica|type=transcript|length=5642bp|location=Sequence derived from alignment at sc0000144:178308..183949+ (Clytia hemisphaerica)
AggaagaaataaaacaaaataaataaaaaacaaagaagtgCAGACGTCAG TGCAGACGAGTTACACCACTGAATCCGTAACATTCCAATCGTTTCAAGAT AGTGGTTTGGCTTGATCAATTTTGTCTCTTAGATTAAACAATGTTGCCAC TTTGACCGTTTTGGTTCAAGCTTTGATCAGGTTGGCTTCTATTATTATAT AAAGACAGACATTTTAGGAGCTTTTATAAATCAGTAAATGCAAAAAATAA AGGATCTATCAAAGTAGATAAATACTGCATTTTACGTACTTTTTCTTTTA GGGGTGTAAAAAAGCAGGTGGTACTCCAGAGGAAATATCTTGAGTTGATC TTTATTACGTAAAGTTTCATTGGTGAAATCTTTGTGATTTTCCGTAGGAC AataaatgttgcatttttgtcAATAGGTCTGAAAAATAGGAGGGGTgcat taaaaagcttttttctaaaGGTTTCCATCTTGACCCTTAGCACCTGACGT CATAAAAACCATTTTCATGAAATTCCCATGCACGGCGTCTATTTTTCTCT AAACCACGTGTTACCAACCCGTCCAGGATCAGTAATTTTTACCACTTGCA CCAACCATTAGTGATCTATTCCGCCTAAATTAGCTGTTCTTTGACAACCA gttgttttttgacaaaattgaaataagACTGCCTATAAAAGTCCTAACCC GGGACCATCGGGTGTTAGTCAATGTACTTTCTTTGCCAGGTAAACGGCTG ACGACTGCTAGGTTCACTATGAAAAGGTCCTTCGTTCTTTAATACATTAT ACCTCTTCTTACCTTTTAGCAAATACGAAATAAATCaatattgaaaaatt aagaGAAGTATAAATTATGAACCAACATGAACGAAAAAGCCGACGTCACG CGCAACAACCACACGATGACGTCACCACAGAACAAATTGCAGAAGACCAG GAAACACCAATCGATTACTTGAGTCGTAACAACCACACCACCCTCATCAA AGATGCTGTTAAAGTCTTGTTAGCTAACCGCCCCGATGACCCTTTACAAT TCTTAGTCGATTTCTTTGCCCCTAAAACACAAACGACCATCATTGAGAAA GCTTATGATAAATTGTGCTGGACTGATTACTCAATGCCGGTGTATCAGAG AAATGTTCTCGAAGTTTACGATCAATTAACGGCCATGAAAAATGAGGATA CTCATTTGAAAGGTCTGCTCGGTATTCGGTTTAACGAACTTTTAGAGAAA CTCGCTAACGATCTCCCAGAAGTCTTTGCAGAGGGGGTTTACCTGCGTGT GAAAACGAGGCAGGATCAAGTGATATCTTTTCGCCGTTTTTATCACAGTA TTTTGTTGATGCatgttttaaaagattttgtctcGCTTATCAAAGCAATG CACAAAGATTTAGATGTCCAAGACTTTGGGAAAGTGAGTCAAAAGCTGTG TTCGCTGGTTGTTGAGCGGTTATTTGAATCCTTTAACAGTGAATCAACCA CTCTTGGTAATGACAGATTGTTTGCCAGCACCTTTCTTGAGAATGCAGAA TccactttgatgaatgaaaaagaaTCTTTGAGCGAACAAGATTTCGTGAA ACTTTGCATAGATCAATTTTTGGATTATGTCGTGTAAGAAGAGGCCTGCG ATAATTGTGTGGtgatgtttttgttcttttattttctcattatttcACCA GCCAATTGATCTGGTTTTCCTGGGactttccgaaaaaaatattggGGCTA ACTCAGCTTTTGACGGTCATTCTAACCTCACTCGTGAACCATGTGtttaa tcttttattttattttatttttagagcTGATAGAGTGACATTTCCCTTCC CTCATGTTGGGCCTGGGGGGTACTGCTAGCTCTTAAACAAAGTGATAAAC ACGGGACATTGACTTTATTACCATGATATTAATTTTGTTAAGGAAATGTC TTCACGTTGAcctttcttttttcaatcatttgGTAGACAAACATCTTTAC ACCTTTATACGTCACTCCATCCTGAGTAACAATGTACATTCTAGGCTGAT TTGAAGGACTGATCAGTTGCTGCACCAAAGTTGTTGCGTTTTGTTTCTAG TACATTAGAgggtttttctttcttcttaacACATCAATTCTGTTGCGGTG CTCTCAATCGTTCAACTTCGAAAGTCTTTTTCATATAATGCCGTCTTTCT TATTCTATTCTGACcccttcagttaaaaaaaatatacaggATACCAGAAT ATCTTATACTGCATAATTATATGCCTCCCTCTAATCTTACCACAAACAGT CTTGGCTTCAGGTTGAGAATCTCTAGCGATTATTTGCTGCTCATAACCCA CACTTCGGGTTGACACCTTTCCTTCTTACTAAAATATAAACCAAGTCTGA GTGGAAAAAGAGCTCAGCCACTTTAAACACACAAAGCACGCAACAACTGC TCATGTGCTTATCTGATATATCTGATATTTCGATGGTTATCTGACATTct gatggcgtattggcggtcACCGCGCTTAATTCTATACATATTGTTAATAT TCGTGacataatcttttatacggaaacacccgaagAAGACCGGGCATTTG CCACCAGTACCACTCTAGTACCATCTTGTCTGGCCTTGATGAAAATGTCT GAATCCCTTGTTGATATCCCCTTTGCAAGAAGGCCTTTACCGACACTTTC TATGCCACTACACCACTGAcctatatatccctggaccaagctatatttgc catctttgatcgaagtttttttttgaattggtatctgtaaagaagccatt gcagtgttaaaattaacgtctaacggcgctacatcatcaaaagtttttga gGGGAAGTAggtctagcgctctcgatgcatttacaccgctattgagtagt gctgccattagggtaccacttttcaaaaaactccgatcaaagattttgct tggccgggattgagaagcttggtctAGGGACCTAGATGGTCTAGACCCAA CGTTTGGTTCTCTATCAAAGGATGTTCTTACCCCTTGGAGTTCATTAACA AAAATGGCCTTGGGCCTATTAGAATTGGGTTTGCTACGCACAACTCCAAA ATCTGGTTGTATCACGATTGAGCTGGCAAATGTGGGGTCAACAAAGTTTG AGTTGCTTGTTCTGACTTTAGTTTTGAAGGTGTTTTCCCTATGAGACAAA CGGTGGGACTTTGGTCTTTCCAATTCAATTGAAATGCATCTACTGCTTGA CTTATTGGATCTGGCTTTCGTCTAGTTGCCATTCGCTAGAATCGTGGAAA TTTCTGGATTCCCAATCTGCCACAAAGTTGTAAATCCCTGGAAGGTGTTC TGCTGTAATCATGATCCCTTGGTTCAGTGCTAATTCCCATATCTCTTTGG ACAATGAAACCATCTCCTAGTTCCTTGTCCCGCCCATATTTACAAGGTAT GCTACCCATGCTAGGGCTGATATGTTGTCCGTTTGAAAGTGGACATTCTT CAATGTGAATATTTCGTAATAAGTTAACAAGGTAAGGTGAATGGCTTTCA TATCTGTTCTTTTCTCTAGAAGAGTCTAGCGCCCCCTGTCCTTTGGTTCT AACAAAAAGCTCAAAAGGCTTCTGTCTGGATCACTATTTTTCTGGAGGGT TTCAACAGGGACCTTTCTTTAGATTGATCATTCATCATTCCAGCTCCTGC ACATTGTTTTCGTTCAGAGCTGGGAACTCTGACTCTGTTTGGTCATCTGG ATATACTGATGTTGAAGTTATCGCATCTGAAGAAAAGTCGAAAGAACAGC CTGAGCTGTTGAGCAAAGATGACCTAAGAAACTTGCTATTTCCCCTAAGT TTGTTTGATGATGTTTGATTAACATGTTTGAGATTGTGTACTTTCACCTT TGGCAGTGTCAGGGGCATTTCCACAAGTCGAAAGAACAGCCTGAGCTGTT GAGCAAAGATGACCTAAGAAACTTGCTATTTCCCCTAAGTTTGTTTGATG ATGTTTGATTAACATGTTTGAGATTGTCTACTTTCACCTTTGGCAGTGTC AGGGGCATTTCCACAGAGTCCACTCTTCTGACATGGGGTCAGAACAGATT TCTTTAAATTTATGGCATAAATCCCAGGTGCTGAACATTTTCGAAAATGT GGTCAAGTTCTACCTCTCCTCTCCGACGTCGTTCTTCCGTTAACTCCTTG AAGTGCTCGTCCATTTTTGGCGCCTTGCACAAAAAGTTCTTAAGTATTGT TCTTGTCTTTAAGCTATTTCTCTTTTACaaattgcagaaaaaaattGCGA GCATAAGAATTCATTTCATCTGATAATGGCCAGTCGGCGTCCTCAGCTTC CGGTTTTAATCTTCTTCTTTATAAAAGAAATGCTTTGTGaaggaatttca ttttcatgtagagGTCATTTTCCCCCAGGGGACCACAGTGATCCCAGTGA TCCTCTGGGTGGACGACATGATTTGTTGCTACCCTCCTCGCCTCCTCAGA TGGATTGACCATGCTCGACTCCCTCGACTCACAGCAGGGTTTTCGAAAAG TGTTTCTCAAAAAGTAGAAATAAAGGACAATAAGGGAAATATGTATTCTC TTCACCGTTTGTTATTCAATTCCGAGCTCCTTTTGTCAACCATTTGTTCA ACTAGTGAATTTAACTGGATGTTATCACAACTTTAGGCTATAACTACCAA CCTCCTCCCTTAATAAATTGAAAGCCTTTAATGCAGTATTGTGGAAAACG AGGAATGAGGCTCTTGAGTTATGGATGAAACCTGGTTATGgttcatgatg aaatgaaaaaatagacACAGTGACCCGGCCGTGatttgaacacgcaacct tctgatctggagtcagacgcgctaccattgcgccaccaAGCCACACTTAT TCATACATGTCTCTCTATTTAAATCATTAACATGTTGTTGCTATGGTTTC TCATGAAATCTGTTACCATGGGGGCATTTGATTGACAGCTTCATTGATAT TACTACCGCTCTAAATACGAAACCACAGAATAACGATTAATATTTTAAGG CAAAGCTAATTCAGGAACCGTGGCTtggtggcgcaatggtagcgcgtctg actccagatcagaaggttgcgtgttcaaatCACGTCCGGGTCACTGtgtc ttttgtttatttcatcGGGCAATCTATATTAACCCGACTTCGACCCCCGA CCCTCGGCTTTTTCCAAGGGGAGGAAAGGCCTTTTTCTAGGGTCGCGGTC GAGGTCGGATTAGTATTAGATTGCCATTTCATCGTGACCCAAGAGCAAGC GtgccaattttttctttttgacggTACGATAGGGACGACGTTCGGATGTT TTTCATCGCGAGGCATAGGCTGTTTTTACGCACTTccagtttttataaaa tttgtgaactagaactgcctagggtcaatggcccagaaggcttaagtgac actgcgcacttctgactttttgtcaGGGCGGAAAATTTCCAAGTGAGCGG CCCGcgcgatgaaatttttttcggtctttaAAATAAATGTCGAGTTATGC AAAATGGGTTAACATTTCCGAGTTGTTCATACTTCATATCAAGAGTTACA GGTTAAAATTTCTGAGTTAAGTGCTGGTCAgcaaaatccccc

Coding sequence (CDS) from alignment at sc0000144:178308..183949+

>TCONS_00012384 ID=TCONS_00012384|Name=TCONS_00012384|organism=Clytia hemisphaerica|type=CDS|length=771bp|location=Sequence derived from alignment at sc0000144:178308..183949+ (Clytia hemisphaerica)
ATGAACCAACATGAACGAAAAAGCCGACGTCACGCGCAACAACCACACGA
TGACGTCACCACAGAACAAATTGCAGAAGACCAGGAAACACCAATCGATT
ACTTGAGTCGTAACAACCACACCACCCTCATCAAAGATGCTGTTAAAGTC
TTGTTAGCTAACCGCCCCGATGACCCTTTACAATTCTTAGTCGATTTCTT
TGCCCCTAAAACACAAACGACCATCATTGAGAAAGCTTATGATAAATTGT
GCTGGACTGATTACTCAATGCCGGTGTATCAGAGAAATGTTCTCGAAGTT
TACGATCAATTAACGGCCATGAAAAATGAGGATACTCATTTGAAAGGTCT
GCTCGGTATTCGGTTTAACGAACTTTTAGAGAAACTCGCTAACGATCTCC
CAGAAGTCTTTGCAGAGGGGGTTTACCTGCGTGTGAAAACGAGGCAGGAT
CAAGTGATATCTTTTCGCCGTTTTTATCACAGTATTTTGTTGATGCatgt
tttaaaagattttgtctcGCTTATCAAAGCAATGCACAAAGATTTAGATG
TCCAAGACTTTGGGAAAGTGAGTCAAAAGCTGTGTTCGCTGGTTGTTGAG
CGGTTATTTGAATCCTTTAACAGTGAATCAACCACTCTTGGTAATGACAG
ATTGTTTGCCAGCACCTTTCTTGAGAATGCAGAATccactttgatgaatg
aaaaagaaTCTTTGAGCGAACAAGATTTCGTGAAACTTTGCATAGATCAA
TTTTTGGATTATGTCGTGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006964XLOC_006964Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012384-proteinTCONS_00012384-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012384-exon-sc0000144-1491911889:178308..178487TCONS_00012384-exon-sc0000144-1491911889:178308..178487Clytia hemisphaericaexon
TCONS_00012384-exon-sc0000144-1510915933:178308..178487TCONS_00012384-exon-sc0000144-1510915933:178308..178487Clytia hemisphaericaexon
TCONS_00012384-exon-sc0000144-1575043694:178308..178487TCONS_00012384-exon-sc0000144-1575043694:178308..178487Clytia hemisphaericaexon
TCONS_00012384-exon-sc0000144-1491911889:179127..183949TCONS_00012384-exon-sc0000144-1491911889:179127..183949Clytia hemisphaericaexon
TCONS_00012384-exon-sc0000144-1510915933:179127..183949TCONS_00012384-exon-sc0000144-1510915933:179127..183949Clytia hemisphaericaexon
TCONS_00012384-exon-sc0000144-1575043694:179127..183949TCONS_00012384-exon-sc0000144-1575043694:179127..183949Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000144supercontigsc0000144:178308..183949 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.318914 0.361247 0.476797 0.418061 3.14994 2.51655 2.64898 2.93385 1.05874 1.46803 1.12804 1.03611 0.811971 0.824027 0.80963 0.821424 1.02085 0.899103 0.677618 0.612577 0.772223 0.764901 0.553088 0.59644 2.3021 2.43827 0.348487 0.414489 0.314258 0.43033
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003117cAMP_dep_PK_reg_su_I/II_a/b
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012384 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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