XLOC_006283 (gene) - C. hemisphaerica

Overview
NameXLOC_006283
Unique NameXLOC_006283
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000122:83859..87165-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006283 ID=XLOC_006283|Name=XLOC_006283|organism=Clytia hemisphaerica|type=gene|length=3307bp|location=Sequence derived from alignment at sc0000122:83859..87165- (Clytia hemisphaerica)
GGGAAAAACCGATCTCAATCGGTGCGTTGCGAGTCAAAACCGGTGTGTGT
TTTTGCTGTATGGAAATCGCTTGGCAGGACACAATATTAGAACAGAAAGA
GAGCAAAGATAACCTACAAATAGAATTGACGTCATAAATGAAAATTTGAA
TAAAGTAAATAGCAAAAAGTTTTTTCATGTATTTCATTTGTTTTATTCAA
AGCTATTGAAGCTCACTATTGCGTCATTTTTAGCTTAAATGGAGTGGTTA
ATTTCATTCTTCGTTCATTTTCATACCAACATGGCTTCGTTAACAACTGT
AAATAAGTGGCAAAGTTCTCTAAAATGCAAGCTAGATATATTGGAGATTG
TCGATGGAAAGGTCAGAAAAATGAAGTGTATTGTTTGCTCTCAGTTTTCT
GACAAGATTAAAGGAATGAAAGGATTCAGTCAGGCTTGGGTAGACGGTAC
AGAATCTATAAAGAAAGATAGTTTGGATAAACACATCAAAGGAGAGCCTC
ATAAACATGCAAAGGACCTTTCATTGAAAGTTTCCTTGGGTGCAAAATCT
TATAACAAGGAAATTGTTTCAAAAACACCGATTGGTAAAGGTTTAACAAA
AATGCAAGAAGAAGATGAAAAGGTAATAAGTTTTTGTCATAATTTTGATT
AACTACATAATCTGTATACTGTGTTTTCTCTTCTTTTGCAATGTATGTAA
TGATTAAATCATGAAAATTTAGTTCCTTCTAAAAATTAATTACCCAGCTG
GCACACAACGTTGTTTCAACGTACATCTAACGTTCATAACGTCCATAAAA
CGTTATATGAACGTTAAAACGTTATATGAACGTTAAATCAGTTATATGAA
CGTTAAAACAACGTTTTGTGCCAGCTGGAGAGTTGCGTTTTATTTTAAAG
CTCAAATGCTAATTTTCTAACATACTTAGACAAACCTTTTTCAGTCAGTA
AACAAAACTTATAAATGTCTTAAGTTTTTAAATTGAAGAGGGGTGTCTAG
AAAAAAGTTTTTAATTGGTTTCACATGATTTTTGTATAGTTTTAAAGAGT
AGTATTTCGAATAGAGAATGGAGTGAAAAAAATAGAATCCCCCCTGTATT
TATAATTTCAGATCCTGCGCACCAGATTCAACACAGCATACTATCTATGC
AAAAAGGAACGACCGTACAGTGACTTTTCAGATCTACTGAGTTTGGAGGA
GAAGAACGGTATGAAAAAGAGTCACAGTTACAGGAATGACAGAGCTGCTG
CTCAATTTATCGATACGGTTGGTAAGGAGATGAAAGATTCTTTTGTGAAT
GATCTTTTGAATGCCAACTACTATTCAGTATTAACCGATGGGAGTACCGA
TGCAAGCATCACAGAACAAGAGGTAGTATATGTTCTCTATCTATCTGGTG
GTGAGCCAAAAGTTAAGTTCTTAGGAATAGAGGCTCCGGATCAAGCAACT
GCTGATGGATTGAAAGAAAATATTGAAAAGGCTTTTCACAATATCGGGAT
AACTCCTATGTATGATTCCCTTGCCAATCTGTGTGTTGATGGAGCTTCTG
TTAATACAGGCATCCATAATGGTATTGGTGCTAAGATGCAAGTTCATGCA
CAATGGCTAACCATTATCCATTGTTTTAACCATAATCTGGAGCTAGCCGT
TAAAGACTGCTTTGATAAGACATTTTTTAAAGAAATCGACAACATGCTCC
TCAAATTATTTTACTTATATCGTAAAAGCCCGAAACGGCTACGTGAACTC
AAAAAGTTTGAGGAAATTTATGATGAATCGATTCCAAAACCATACAAATC
GTATGGAACAAGATGGATTGCCCACAAGATCAAAGCTATGGAGATTGTTT
TAAACAACTATGGTGTATACATCCAACATTTAGAATCGTTAGCACAAACA
GACAGTCAGGCTTTGAAGCGGGCTGAAATACAAGGAGAAGTGAAAAAATG
GAAAAATGCAAAGTTTCCCATACACTTAGCAATGTACATTGATGTTCTAA
CGCCACTTAAAGTGCTCAGCTTAGGTTTCCAGAAGGAAAAACATGACCCT
GTGCTTGCTGTCCGTCGAATTAAAGAGTTCAATTGGACAATGGCCAAACT
ACAAATTCTTGTTGACTCATCGTTAGAGGATGGTAACAATGACCGTCTGA
TTCACATCACCAAACTATTCAAGGAAGTTGCTGATGATGGAAACTATCAA
GGAGTAAAGTTATCAAATTTTACAGTCCATCAGAAATCGATCAGTGAGTC
ATTTGAAGAAATTATTACGAAGCTAGCGATCACAATGGAAAATCGATTTT
CAAACATGATGGCATCACCGGTTTTCGAAAACCTCGTGACTATCCTTGAC
GTATCATTATGGCCTGAGGAGGATAAAGGGCTGTTAGACTATGGTGACGA
AAGTGTGAATGCCTTAGTCGATCATTTTCGCTCTCTTATTGAGAAAAAGT
GCAATGTTTCTCAAATTTCGTCAGAATGGGATAGACTAAAGCTTTCCCTT
TCACCCAAATTGAAGGCAGGAGAGAAGGATTATCTTAAGGTTTGGAAAGA
AGTTTTTTCGAATAAGGGGCTTCAAGACGAATGTAAAAACGTCTTACATA
TCATAGAAATTCTTCTCATTACCCCGTTTACAAATGCCAAAATTGAAAGA
GTTTTCAGCAGAATGAATAGACTCCAGATTCCAGAAATCGCTTGGGTCAG
GCTAGATTGGAAACACAAATGCGCGTGGGAGAAGAAGGTGTCTCAATCGA
CGAATTTGAGGCCGACCTTTATATCAATAAATGGTTTCAGGAAAAGGTTC
ACAGGATAAACGGGGCAAAACCAAGAGATTATCCGTCAAAGCGTCGCTCT
GTTACATCTAAAAGTGGATATTCTGTCATTGATATTGCTCAGGTTACCCT
ATCTGACCTGAAGAACAGTGATGATGAATTTGAACAGTTTGATTGAGACA
TTTTGACTTTCAGTCACATGATGATAAACAAGACTTACAACTTACTACCA
CTTTAGCATTCGATTTTATTACTTTTTACTTTCTAGGTTATTCAGTTATT
TTCTACAAGAATATGGTTCTATAATATATAATATAATTTTACTACACAAA
TTTCCGTTCTCGTAGAGATTTCTCGAGACAGTAGAGACATAAATTTATTA
TTGTTTTGAACACAAAATTCCAAAAGAGGCATACAAATTTCTAAATTCTA
TCTACTTCACATTTATGTTGTAGATAGAACAATAGATCGTAAATATAGAT
CGCATTTAATCGCAAATTACATCGCAAAACTCCAAAAGTGCTTCGCAAAC
ATCTAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011227TCONS_00011227Clytia hemisphaericatranscript
TCONS_00011226TCONS_00011226Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00011226-proteinTCONS_00011226-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000122supercontigsc0000122:83859..87165 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.76	0.56	0.93	0.99	5.5	3.96	3.1	5	1.42	1.5	1.05	1.54	1.46	1.74	0.86	1.56	0.85	1.1	1.36	2.53	2.45	2.84	0.48	0.75	1.41	1.87	2.56	2.7	2.49	3.15