XLOC_005422 (gene) - C. hemisphaerica

Overview
NameXLOC_005422
Unique NameXLOC_005422
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000098:87295..95319+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005422 ID=XLOC_005422|Name=XLOC_005422|organism=Clytia hemisphaerica|type=gene|length=8025bp|location=Sequence derived from alignment at sc0000098:87295..95319+ (Clytia hemisphaerica)
GGATGACCAAGAACTGAGATGCACTGATGAAGGGGAAGAGAAAAAGAATT GGGACATGGTTTTCATGGAAGGATATTTAAAGAAATTCGGCAAAAAGGTA TATTTCAGGAACATTAACAACTTTGGGGTAGGATTTAGATCATTTGCCGG GGAAGCTATTCGTCTCGTAGAAAAAGATTCCTTCCCAGGGGAGGGGGTAG TACCCCTTGCCGACGGACAtaggtgctccgctgaggttcgaaaagtggac cctacgtggggcttgttttttcaaaaactttgccgaaatttgcgaacAAA GTgacctgaatgggactgaaattccaaaattttcataaattttctacttt ttccccaaattttccaaaaaaggcaccctgtgtttttgcgaccctacctg ggactcgtggcggttaaaaaaggtaccctaaccagcggcgcatccctgta gcccattttgccctagtatcCCCCGGGCTTTCCTTATTTATTGACAGAgt attttcttttatatttcAATGTTTGTATCAATTTGCACTTTTTATTGCAG TCTCTGATTGGCCTTTAAAACACTGAAGTGTGCCCTTAATCGTAAAACTA CAATGATAACTAGCCTGTGTATTTATCTTTTCCTTAGCGTAACAAGAGGC GTTATTATGTCTTACATCACCAATCAAGTGAATGGAAAACTAGACTGGAT TGTTTCGAGAATGAGAAGAAATACAAGGCTAGTTTACCTCCAAGACGCAC CATCTACCTTGCAGACCTTTTTGATGTTGTTGCCATGGATTCCAGACGGT TCCCTTGCTCCTTTACTCTTTTCACCAATCAAGAGAAAATCTCTCTGACA GCTGATAATGAGaaacaaaaactaatttggaTCAATGTTattaaattcaa caaaaatcaGGAGAAACAACCTCAGTTATGTGCCGCAGGTAAGATTTCAG TCTCATTTAAAAGTACAATTGACGCTAACTATTTCGACTTTCTACTATTC AAAGTCACGGTCAACTCTCATAAACAATGCTGTACTATTCGATATGCTCC CTTACtctccttaaaaatcgaattagagaacctCAGTTATGTGCCGCAGG TAAGATTTCAGTCTCATTTAAAAGTACAATTGACGCTAACTatttcgacg ttctactattcgatacgctcccttattcgataatattgaaagccaccgtc aacaagaaactcataaacgacgttctaCTTTTCGATAagttcccttattc gataatattgaaagtcaccgtcaactcTCATAAACAACGCTGTACTATTT GATATGTCCCTTACtctccttgaaaatcgaatcagAGAACATCAGTTATG TGCCACAGGTGAGATTTTGGTCTCATTTAAAAGTACAATTGACACTAAAT ATCCGGTCTTATTttggtgcttccgtataaaatattacatcatgaatatc acgaattgATCTCTTAGTTTATTTTCACGAATTTCGAAGAAAATGTCTAA TTTTTCGGTaccatattatttttttaagtggAGGAGAAAAAATGGAATAT CGTTATTCAAAAACATGGAANtattatttttttaagtggAGGAGAAAAAA TGGAATGtcgtcattcaaaaacattccaTTGCTCAGGACAACTCATACCA AGTTGAAATGTGCTCTCAAGCAATAGACTTTATCGACTCTTGTGATGATA TTGCAATTTCTATTCCCATGGAAACCATTATTAAATATGGCTACACTGAA GACTCCTGCTATCTTGAGGTAAGGGTTGATCCTGCTGACCTTTACAAAGC ctagaccaagctatatccgccatctttgattggagtttttagCATACACT TTGTTGTGAAGCCTGGGTTACATCTACAGTAGGTCGCTTATAAGCGTTTA CACACGNACCAaactatatccgccatctttgattggagtttttagCATAC ACTTTGTTGTGAAGCCTGGGTTACATCTACAGTAGGTCGCTTATAAGCGC Ttacacacgttttttttataagaacatccaaaatttttgaagccttcgga tgttcttaattttcttagttttaagcctaaaaatgttcttaacatgttct tattttgaccattttcctaagaaataggatgtttttgagtccacaaagct ttaagatgttcttaacttgttcttaacattttggccagcgaagccttatg ttcttacatagtttgttcttattaaaaaacgtgtaccttaaGTGCCTTCC CCTCGGTTCACAACAATGATGTATCATCGTCATTTGCAAAGAAAGAACTA TGAAATCGCATTAATATTCTGTAACAAATTGTTGGCTTCATagatttctc tttttctctttaAGGTCAAGTGTTCTGTTTCCATTGGTGATGCCTCGCTT ATTGATGAAGCTTCAGTGATTTGGTTGAAAATGGACGGGGATGATGAGGC AGAGGAATTCTGTGAAAATATCAAAGAGTAAGTTAATCATCTAGACTTCT CTATGGGACCCCTGGGCCGGCGGGGTACTATAGTTGCGAGCTGAGGGGTA TGTCCCGCctgactttcgaccctcggacccttagcgggactaaaaaggag aaaaaatagaaaagttttgcgatttttacgatccttagtgggactgaaat ttgattttctattttttccaacccttacaggaACTTCAAGGTCCCGAGAA AGGCatccttaagggcggcacatacccgtacccttcacttgcctaagtac cccccggaTACCCCTCAATCCGGGAAATTGTCAACCACGATTGGAGATGT CAATGTCTATGCCCAATTTAAACGCCTCTATAGGCGCTATTAAATGGTTC ATAGGTAGCGGCGCTCCTAGCTCCCTACTGGCGGTAATCAGTCAAAAAAT GAGCGCGAAGGAAGGCCGTATGAAGCAAAGTACCAAGTAGCCCGGAGGTC ACTTAAAGCCTTTTTGATAGAGTGGATGGTACTGATAAGCGACCCAGTGT AACTTGGCAGACTCCATTTTTTGGGTTTGCTTGAGCACGTAGCAAATCCA TACCACTCAATCCACTAGATCCACGTTACAAAAAACAGTCTAGTGTTTCA GTGATTATAGTCTGTCTTTTCTCATATTGTGCGAATCTGATTCCACattc gtttttgtttttggaGTATTTTGACACAACAGCGCGTGTCTGTCTAAcga gatacacgttttttattagaacatccaaaattttagaggccttcagatat tcttaactttagTTTTTAGCCTAAAGATGTTCATaatatattcttatttt caccattttgtgagtgggtgttttagagtttgcaaagccttaagatgttc ttaacttgttcttaacattttggtcatcgaagaaTTATGTTCTTACAcag tatgttcttataaaaagagagTTCTTCATATTACCATTTCACCGACTTTC GCTTTTTGATATATGAAATCAGCAAATCTCATTTTACTTTGGCATTCAAA CCATAACATgaccaaaattatttttcatttgaataGGTATTAGATTAAAA TTTAGCCGCCAGTAAATCAGCAAAAGCTATCATTATAATTTTGTAAACGT AAAAAGCTTTGAATTCCAACCTAAGAGCTTTAATTTAGAAATTAATCTGG TGAGGACTTTTTGTTTTGTGCGTCAGATAGTGCTCCAGAATCTTTCGGAT TTGTAGCAAAATTTCGTAATGCGCAATTGAAGTTGTTTGTTTTGTGAAAA TAACCCACGCTACTCCACAGGAGCCCAAATTGTCATTTTTGCACTGTGAA CAAAAAACCTGTATTGACTTGCATTATTCTCTTAAGTACATTCTCTGCGG TGAAGTGTGATGGTACacgttttgttataagaacaaactataaaagaaca agAACATTTTGAGACTCTAAAGCCGAATTTTATTagggaaattgcacaaa aattctcataaaaacgttttataagaacaggtaagaacatttttggactt aaaactcaaaaggttgagaacatccaaaggcttttgaaattttaaatctt cTAATAATAAAAACGTGTTCTTATTAATCTTCTACGTAGTTTCCACTCAC TTGAAACATTTCTCGACTCCGATGACAGAAGAGAGGTATCTAGTCTAGAA TTTCACAAATTTAGGAAAAATAACACTTGAGTAAAAATAGTACATGATTT ATAATGGATAAGACAGGATAGTAAATTATTAGTCACGGATTTCAAGCTTG GTTTTTAAATTACCGGGTTTCagtcattgagtttaaagcccgaagggcta gagtagaatctctaacctttttcaaacaagaaaaagtgaagtcacttatt tcccatccaaaatgcGCCTAGAACGTGCCGCAACCATGATAAccgattgt atctagcggtttctttatttttgaagacTGCAGtttagcgatagatttta gtttcaatccggcgtttgtgtataAACCACGCGctggcgttctggatggg aaataagtggtttcatttcctaTCCAGGAGTTTAGCCCTACGGACTTGGA GGAACTCAATGGTTTCAGTGGTGAGGTTAAGCACAGTAAACTcttgctta ttcgaacttcttttattcaaattattccataactcgaacttgTTTCCAGC CGCCGTCAAGGATAGAAAAACCCTCTTAAAAatctttctataactcgaat ctctctgtaattcgaacaaataagattccccgttcaagttcgaattagcg agagtgaACTAAATACCCACTGAATTTAAAGCCCGAAATGCTAGAGTGTG AAATCATTGCGTAAGTGAAGCAACTGCGTTCTCCTACGATgcgttttttt gaaaaccacACGGGTCGCACGTTTCAGAGGGGAAATAAAGGGCTACATTT CCGCTCCAAGAGTTTCCTCTCTAGCTCTTTCGGGGCTTTAATTTCGATGA GTATACCCGTATAAATGCAAAGATGTAATTGGACGAACGAAaatagtgag tttcaaccaatcacgcctcgtattttcactagccaaTTACATTTTCCGTT TGCACTCGGGAATTATTTACCGGCACTTCACCTCACTAGCACGTCCATAA AAATCAAACCGTGAGCTTTATTTTTGTGTTGCATGATGGGTACTTATGAA ATGCATTATTTTCACATTGTTGAATGGCTCTTCAATAAGTGAGTATAAAT TTCTTTGCATACGAGATTTTATCAcccgatttttttttgcttcctGTCTC GTTTAGTTATTGATTTTCGGgctcaatttttttccagggcGGGCAGTTGG TCTGCGACTGCAGTCGGTGGCGACCCGAAggttcctctttcgatagctac cTACCCgagaaggtaggggagggcacctctctttctccctggattactcc acttacccttgatccttctcttaattgctgatcatcaagcagagaggcac caagtaccattttgggaatctttggtatgacccggctgggggttgaaccc acaacgtGGTGCACCGTACCCGGATAttctaccactgcactatggTCGTT TTTAAGTGTCTGAAGTAATTAGTAAGGCAAGATTTACAATGGTCGGTTTT CCCAGAACTCGAACCCTCTACTCTCAAGTCAGAAGACGATAATCTGAATC ACAGAGCACCAGAaagatttttcatgttttgacgGAAGGCGGAAGGGAGA ATAAGTCAACCAATTTCAATCGAATTTCTTCTTCCGTAATAGTGGATTCC CTGATTCCGGCAAAACGTGAAAAACCTCCACTATCTGTTAGCATGCCAGC AACCTAAAGAGGCGACAGCTCGGTAGAGCAGCAATATATTTCTTTCGCAA CAAAGTTTGCTAAGAGCATGGTCTGTTGACTTTCAAACTTACTTCACATT TATTTCTCACTACAGGTACAAGAAAAATCGCCCGCGCGCACGAACAGAAA AACGCCCATCGTTACGTCCAAGAGCAACCGATTTGAGACGATCGTTAAGC TTTTCAGACCTTTTAGATGTGCCTGCTACAAATACAGGTAGATATTCACA GTTGGGACTTTTTTATAGGGAATAAGGATAATACCTTTTCTTTCGACCGT GAAAAACTATGAATTATAAGTACTCTGCAAATTAACTCCGGTggtaaaaa tgcaaaatatgCTTGTTAGGTCAATCGAAGTTATGGCGCAGTAGTGTCGT GGTTATCAGCCTTGACTTCCGTGCAGGAGGTCGGGTTTCAATTCCTACTC GGTGCTGTGATTCACTTgacaagtgaatgtaccttcgtGAGTGGAATTGG GTACCACGCCCTAATACAAGAGTGTGGGACATATGCTTGTGATAggcatt ttcataaattattgtCAGTGCAACAACTGCCTCGTTCTGTAACCATTGCC AATGTGATTAAGTCTTCAAGTTTTGCTTTGATGAATAGAGTAAACTTCTT ATGAACTCTTTTGGAAAttaattaccatagcaatattttgaaaacgaggt aagcattgctcgtgacgtaatttatgaaaaggtctattgcaaaTACTTGT TAGGTTCGACCATGCGAGGATGCAATTCCCAAATCATTTGAGTATAGTTA CTATACTCTAAAACTTGTGTATTTCGAAACCACGAGTTTAATTTACCCTA TCCTAGGATAGTGGTTTTTGTCCTGGATACGGCCTTTTCCGTCCCCCAGA AGGACTTTCTCTCCAATCTCTGCGTATATTATTTATTTCGCTTTTCGGTT CCTTTACTTTGGTGTGTGTTTCTTGATATCGAATATTTCAActcttgtat caaccattatGTTTTCAGAGCATTCGCCACGAAATTCTGGTTACTTTGAA TCAAATCACTATGGTTTGCTCACGTTCGACCACGATATGAAACCAACAAA CTCCATAGTGAAAGCAGAAATCCCCATATTGAAACCAGCAAACCCCATAG TGAAAGCAGAAATCTCCACCGcggaaaatcttatttttgagGGAGAGGGA ACTCAGACAGTTGATGAAATTGATTGTAAACAGTCAAATAACTTTCacac aaattctgaaaattataTGGTTGACTCTTCAATCTCATATGGTGATTCAA ATCCCTTGGCTATTTCACCAATTCCCAATGGGGAATCTACTCCTGGATAT GATAGGACAATTTCAGAGGTAGAAACATACGGAAGCGAAGAGAATTTTAC CGAGCTGATTTTCCCATCTAAGATAGACGCGAACAACAACGAGGAAACTC TTTTCACAANTTTCAGAGGTAGAAACATACGGAAGCGAAGAGAATTTTAC CGAGCTGATTTTCCCATCTAAGATAGACGCGAACAACAACGTGGAAACTC TTTTCACAATGGGAAACGAAGAAAATCACAATGAGGAATTAGACGAATTC CCTAATTATAACTCCCTTAATTTCAAACGAGAAAGTCAACTATCTGATGA TATATTTTATGATAACTCCATAACAATTGATTACCATGGGGATGCATCAG ATCACACTAATGATAAAGAAGTAGCAAGACTGAGGAAAAAGAGTAGCCAC CAGTATGGGAAATACAGCAATCACAGCTTGAGTTACGACCCAGCTAGTGA AAAAGAATcagaaaaagaaaggaaaagaagCAGCCATGAGTATGGAAATT ACGATAACCATCAGTTAGCTTGTGATTCCACAGAGGTGAAACCTGATTCT CCTAAGGAAAAGCACGtagaaaaacaaaggaaaagaaGCAATCATGAGTA CGGAAATTATGATAACCATCAGTTAGCTTGTGATTCCACAGGAGGAAAAC CTGATTCCCCTAAGGAAAAGCACGCAGAAAGACAAAGGAAAAGAAGCAGC CACCAATATGGGAAATACGACAATCACCGTTTGAGTTTCACTTCCCATGG GGAAACATCTGATACCCTTAGTGAAAAGGAGATTGCTAGACAGAGGAAAA GAAGTAATCACCAATATGGGAAATATGATAATCACCGTTTAAGTTATCGA AGTAGAAGTTCAACCGAATATTATG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009694TCONS_00009694Clytia hemisphaericatranscript
TCONS_00009695TCONS_00009695Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009694-proteinTCONS_00009694-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000098supercontigsc0000098:87295..95319 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.04 0.11 0.02 0.04 0.11 0.36 0.05 0.28 0.23 0.16 0.14 0.23 2.12 2.03 0.51 0.68 0.52 0.21 3.61 1.86 0.37 0.74 0.29 0.63 1.04 0.8 0.38 0.06 0.68 0.9