TCONS_00009694 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009694
Unique NameTCONS_00009694
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2022

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009694 ID=TCONS_00009694|Name=TCONS_00009694|organism=Clytia hemisphaerica|type=transcript|length=2022bp
GGATGACCAAGAACTGAGATGCACTGATGAAGGGGAAGAGAAAAAGAATT
GGGACATGGTTTTCATGGAAGGATATTTAAAGAAATTCGGCAAAAAGCGT
AACAAGAGGCGTTATTATGTCTTACATCACCAATCAAGTGAATGGAAAAC
TAGACTGGATTGTTTCGAGAATGAGAAGAAATACAAGGCTAGTTTACCTC
CAAGACGCACCATCTACCTTGCAGACCTTTTTGATGTTGTTGCCATGGAT
TCCAGACGGTTCCCTTGCTCCTTTACTCTTTTCACCAATCAAGAGAAAAT
CTCTCTGACAGCTGATAATGAGaaacaaaaactaatttggaTCAATGTTa
ttaaattcaacaaaaatcaGGAGAAACAACCTCAGTTATGTGCCGCAGtg
gAGGAGAAAAAATGGAATGtcgtcattcaaaaacattccaTTGCTCAGGA
CAACTCATACCAAGTTGAAATGTGCTCTCAAGCAATAGACTTTATCGACT
CTTGTGATGATATTGCAATTTCTATTCCCATGGAAACCATTATTAAATAT
GGCTACACTGAAGACTCCTGCTATCTTGAGGTCAAGTGTTCTGTTTCCAT
TGGTGATGCCTCGCTTATTGATGAAGCTTCAGTGATTTGGTTGAAAATGG
ACGGGGATGATGAGGCAGAGGAATTCTGTGAAAATATCAAAGAGTACAAG
AAAAATCGCCCGCGCGCACGAACAGAAAAACGCCCATCGTTACGTCCAAG
AGCAACCGATTTGAGACGATCGTTAAGCTTTTCAGACCTTTTAGATGTGC
CTGCTACAAATACAGAGCATTCGCCACGAAATTCTGGTTACTTTGAATCA
AATCACTATGGTTTGCTCACGTTCGACCACGATATGAAACCAACAAACTC
CATAGTGAAAGCAGAAATCCCCATATTGAAACCAGCAAACCCCATAGTGA
AAGCAGAAATCTCCACCGcggaaaatcttatttttgagGGAGAGGGAACT
CAGACAGTTGATGAAATTGATTGTAAACAGTCAAATAACTTTCacacaaa
ttctgaaaattataTGGTTGACTCTTCAATCTCATATGGTGATTCAAATC
CCTTGGCTATTTCACCAATTCCCAATGGGGAATCTACTCCTGGATATGAT
AGGACAATTTCAGAGGTAGAAACATACGGAAGCGAAGAGAATTTTACCGA
GCTGATTTTCCCATCTAAGATAGACGCGAACAACAACGAGGAAACTCTTT
TCACAANTTTCAGAGGTAGAAACATACGGAAGCGAAGAGAATTTTACCGA
GCTGATTTTCCCATCTAAGATAGACGCGAACAACAACGTGGAAACTCTTT
TCACAATGGGAAACGAAGAAAATCACAATGAGGAATTAGACGAATTCCCT
AATTATAACTCCCTTAATTTCAAACGAGAAAGTCAACTATCTGATGATAT
ATTTTATGATAACTCCATAACAATTGATTACCATGGGGATGCATCAGATC
ACACTAATGATAAAGAAGTAGCAAGACTGAGGAAAAAGAGTAGCCACCAG
TATGGGAAATACAGCAATCACAGCTTGAGTTACGACCCAGCTAGTGAAAA
AGAATcagaaaaagaaaggaaaagaagCAGCCATGAGTATGGAAATTACG
ATAACCATCAGTTAGCTTGTGATTCCACAGAGGTGAAACCTGATTCTCCT
AAGGAAAAGCACGtagaaaaacaaaggaaaagaaGCAATCATGAGTACGG
AAATTATGATAACCATCAGTTAGCTTGTGATTCCACAGGAGGAAAACCTG
ATTCCCCTAAGGAAAAGCACGCAGAAAGACAAAGGAAAAGAAGCAGCCAC
CAATATGGGAAATACGACAATCACCGTTTGAGTTTCACTTCCCATGGGGA
AACATCTGATACCCTTAGTGAAAAGGAGATTGCTAGACAGAGGAAAAGAA
GTAATCACCAATATGGGAAATATGATAATCACCGTTTAAGTTATCGAAGT
AGAAGTTCAACCGAATATTATG
Run BLAST on NCBI

protein sequence of TCONS_00009694-protein

>TCONS_00009694-protein ID=TCONS_00009694-protein|Name=TCONS_00009694-protein|organism=Clytia hemisphaerica|type=polypeptide|length=438bp
DDQELRCTDEGEEKKNWDMVFMEGYLKKFGKKRNKRRYYVLHHQSSEWKT
RLDCFENEKKYKASLPPRRTIYLADLFDVVAMDSRRFPCSFTLFTNQEKI
SLTADNEKQKLIWINVIKFNKNQEKQPQLCAAVEEKKWNVVIQKHSIAQD
NSYQVEMCSQAIDFIDSCDDIAISIPMETIIKYGYTEDSCYLEVKCSVSI
GDASLIDEASVIWLKMDGDDEAEEFCENIKEYKKNRPRARTEKRPSLRPR
ATDLRRSLSFSDLLDVPATNTEHSPRNSGYFESNHYGLLTFDHDMKPTNS
IVKAEIPILKPANPIVKAEISTAENLIFEGEGTQTVDEIDCKQSNNFHTN
SENYMVDSSISYGDSNPLAISPIPNGESTPGYDRTISEVETYGSEENFTE
LIFPSKIDANNNEETLFTXFRGRNIRKRREFYRADFPI
Run BLAST on NCBI

transcript from alignment at sc0000098:87295..95319+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009694 ID=TCONS_00009694|Name=TCONS_00009694|organism=Clytia hemisphaerica|type=transcript|length=8025bp|location=Sequence derived from alignment at sc0000098:87295..95319+ (Clytia hemisphaerica)
GGATGACCAAGAACTGAGATGCACTGATGAAGGGGAAGAGAAAAAGAATT
GGGACATGGTTTTCATGGAAGGATATTTAAAGAAATTCGGCAAAAAGGTA
TATTTCAGGAACATTAACAACTTTGGGGTAGGATTTAGATCATTTGCCGG
GGAAGCTATTCGTCTCGTAGAAAAAGATTCCTTCCCAGGGGAGGGGGTAG
TACCCCTTGCCGACGGACAtaggtgctccgctgaggttcgaaaagtggac
cctacgtggggcttgttttttcaaaaactttgccgaaatttgcgaacAAA
GTgacctgaatgggactgaaattccaaaattttcataaattttctacttt
ttccccaaattttccaaaaaaggcaccctgtgtttttgcgaccctacctg
ggactcgtggcggttaaaaaaggtaccctaaccagcggcgcatccctgta
gcccattttgccctagtatcCCCCGGGCTTTCCTTATTTATTGACAGAgt
attttcttttatatttcAATGTTTGTATCAATTTGCACTTTTTATTGCAG
TCTCTGATTGGCCTTTAAAACACTGAAGTGTGCCCTTAATCGTAAAACTA
CAATGATAACTAGCCTGTGTATTTATCTTTTCCTTAGCGTAACAAGAGGC
GTTATTATGTCTTACATCACCAATCAAGTGAATGGAAAACTAGACTGGAT
TGTTTCGAGAATGAGAAGAAATACAAGGCTAGTTTACCTCCAAGACGCAC
CATCTACCTTGCAGACCTTTTTGATGTTGTTGCCATGGATTCCAGACGGT
TCCCTTGCTCCTTTACTCTTTTCACCAATCAAGAGAAAATCTCTCTGACA
GCTGATAATGAGaaacaaaaactaatttggaTCAATGTTattaaattcaa
caaaaatcaGGAGAAACAACCTCAGTTATGTGCCGCAGGTAAGATTTCAG
TCTCATTTAAAAGTACAATTGACGCTAACTATTTCGACTTTCTACTATTC
AAAGTCACGGTCAACTCTCATAAACAATGCTGTACTATTCGATATGCTCC
CTTACtctccttaaaaatcgaattagagaacctCAGTTATGTGCCGCAGG
TAAGATTTCAGTCTCATTTAAAAGTACAATTGACGCTAACTatttcgacg
ttctactattcgatacgctcccttattcgataatattgaaagccaccgtc
aacaagaaactcataaacgacgttctaCTTTTCGATAagttcccttattc
gataatattgaaagtcaccgtcaactcTCATAAACAACGCTGTACTATTT
GATATGTCCCTTACtctccttgaaaatcgaatcagAGAACATCAGTTATG
TGCCACAGGTGAGATTTTGGTCTCATTTAAAAGTACAATTGACACTAAAT
ATCCGGTCTTATTttggtgcttccgtataaaatattacatcatgaatatc
acgaattgATCTCTTAGTTTATTTTCACGAATTTCGAAGAAAATGTCTAA
TTTTTCGGTaccatattatttttttaagtggAGGAGAAAAAATGGAATAT
CGTTATTCAAAAACATGGAANtattatttttttaagtggAGGAGAAAAAA
TGGAATGtcgtcattcaaaaacattccaTTGCTCAGGACAACTCATACCA
AGTTGAAATGTGCTCTCAAGCAATAGACTTTATCGACTCTTGTGATGATA
TTGCAATTTCTATTCCCATGGAAACCATTATTAAATATGGCTACACTGAA
GACTCCTGCTATCTTGAGGTAAGGGTTGATCCTGCTGACCTTTACAAAGC
ctagaccaagctatatccgccatctttgattggagtttttagCATACACT
TTGTTGTGAAGCCTGGGTTACATCTACAGTAGGTCGCTTATAAGCGTTTA
CACACGNACCAaactatatccgccatctttgattggagtttttagCATAC
ACTTTGTTGTGAAGCCTGGGTTACATCTACAGTAGGTCGCTTATAAGCGC
Ttacacacgttttttttataagaacatccaaaatttttgaagccttcgga
tgttcttaattttcttagttttaagcctaaaaatgttcttaacatgttct
tattttgaccattttcctaagaaataggatgtttttgagtccacaaagct
ttaagatgttcttaacttgttcttaacattttggccagcgaagccttatg
ttcttacatagtttgttcttattaaaaaacgtgtaccttaaGTGCCTTCC
CCTCGGTTCACAACAATGATGTATCATCGTCATTTGCAAAGAAAGAACTA
TGAAATCGCATTAATATTCTGTAACAAATTGTTGGCTTCATagatttctc
tttttctctttaAGGTCAAGTGTTCTGTTTCCATTGGTGATGCCTCGCTT
ATTGATGAAGCTTCAGTGATTTGGTTGAAAATGGACGGGGATGATGAGGC
AGAGGAATTCTGTGAAAATATCAAAGAGTAAGTTAATCATCTAGACTTCT
CTATGGGACCCCTGGGCCGGCGGGGTACTATAGTTGCGAGCTGAGGGGTA
TGTCCCGCctgactttcgaccctcggacccttagcgggactaaaaaggag
aaaaaatagaaaagttttgcgatttttacgatccttagtgggactgaaat
ttgattttctattttttccaacccttacaggaACTTCAAGGTCCCGAGAA
AGGCatccttaagggcggcacatacccgtacccttcacttgcctaagtac
cccccggaTACCCCTCAATCCGGGAAATTGTCAACCACGATTGGAGATGT
CAATGTCTATGCCCAATTTAAACGCCTCTATAGGCGCTATTAAATGGTTC
ATAGGTAGCGGCGCTCCTAGCTCCCTACTGGCGGTAATCAGTCAAAAAAT
GAGCGCGAAGGAAGGCCGTATGAAGCAAAGTACCAAGTAGCCCGGAGGTC
ACTTAAAGCCTTTTTGATAGAGTGGATGGTACTGATAAGCGACCCAGTGT
AACTTGGCAGACTCCATTTTTTGGGTTTGCTTGAGCACGTAGCAAATCCA
TACCACTCAATCCACTAGATCCACGTTACAAAAAACAGTCTAGTGTTTCA
GTGATTATAGTCTGTCTTTTCTCATATTGTGCGAATCTGATTCCACattc
gtttttgtttttggaGTATTTTGACACAACAGCGCGTGTCTGTCTAAcga
gatacacgttttttattagaacatccaaaattttagaggccttcagatat
tcttaactttagTTTTTAGCCTAAAGATGTTCATaatatattcttatttt
caccattttgtgagtgggtgttttagagtttgcaaagccttaagatgttc
ttaacttgttcttaacattttggtcatcgaagaaTTATGTTCTTACAcag
tatgttcttataaaaagagagTTCTTCATATTACCATTTCACCGACTTTC
GCTTTTTGATATATGAAATCAGCAAATCTCATTTTACTTTGGCATTCAAA
CCATAACATgaccaaaattatttttcatttgaataGGTATTAGATTAAAA
TTTAGCCGCCAGTAAATCAGCAAAAGCTATCATTATAATTTTGTAAACGT
AAAAAGCTTTGAATTCCAACCTAAGAGCTTTAATTTAGAAATTAATCTGG
TGAGGACTTTTTGTTTTGTGCGTCAGATAGTGCTCCAGAATCTTTCGGAT
TTGTAGCAAAATTTCGTAATGCGCAATTGAAGTTGTTTGTTTTGTGAAAA
TAACCCACGCTACTCCACAGGAGCCCAAATTGTCATTTTTGCACTGTGAA
CAAAAAACCTGTATTGACTTGCATTATTCTCTTAAGTACATTCTCTGCGG
TGAAGTGTGATGGTACacgttttgttataagaacaaactataaaagaaca
agAACATTTTGAGACTCTAAAGCCGAATTTTATTagggaaattgcacaaa
aattctcataaaaacgttttataagaacaggtaagaacatttttggactt
aaaactcaaaaggttgagaacatccaaaggcttttgaaattttaaatctt
cTAATAATAAAAACGTGTTCTTATTAATCTTCTACGTAGTTTCCACTCAC
TTGAAACATTTCTCGACTCCGATGACAGAAGAGAGGTATCTAGTCTAGAA
TTTCACAAATTTAGGAAAAATAACACTTGAGTAAAAATAGTACATGATTT
ATAATGGATAAGACAGGATAGTAAATTATTAGTCACGGATTTCAAGCTTG
GTTTTTAAATTACCGGGTTTCagtcattgagtttaaagcccgaagggcta
gagtagaatctctaacctttttcaaacaagaaaaagtgaagtcacttatt
tcccatccaaaatgcGCCTAGAACGTGCCGCAACCATGATAAccgattgt
atctagcggtttctttatttttgaagacTGCAGtttagcgatagatttta
gtttcaatccggcgtttgtgtataAACCACGCGctggcgttctggatggg
aaataagtggtttcatttcctaTCCAGGAGTTTAGCCCTACGGACTTGGA
GGAACTCAATGGTTTCAGTGGTGAGGTTAAGCACAGTAAACTcttgctta
ttcgaacttcttttattcaaattattccataactcgaacttgTTTCCAGC
CGCCGTCAAGGATAGAAAAACCCTCTTAAAAatctttctataactcgaat
ctctctgtaattcgaacaaataagattccccgttcaagttcgaattagcg
agagtgaACTAAATACCCACTGAATTTAAAGCCCGAAATGCTAGAGTGTG
AAATCATTGCGTAAGTGAAGCAACTGCGTTCTCCTACGATgcgttttttt
gaaaaccacACGGGTCGCACGTTTCAGAGGGGAAATAAAGGGCTACATTT
CCGCTCCAAGAGTTTCCTCTCTAGCTCTTTCGGGGCTTTAATTTCGATGA
GTATACCCGTATAAATGCAAAGATGTAATTGGACGAACGAAaatagtgag
tttcaaccaatcacgcctcgtattttcactagccaaTTACATTTTCCGTT
TGCACTCGGGAATTATTTACCGGCACTTCACCTCACTAGCACGTCCATAA
AAATCAAACCGTGAGCTTTATTTTTGTGTTGCATGATGGGTACTTATGAA
ATGCATTATTTTCACATTGTTGAATGGCTCTTCAATAAGTGAGTATAAAT
TTCTTTGCATACGAGATTTTATCAcccgatttttttttgcttcctGTCTC
GTTTAGTTATTGATTTTCGGgctcaatttttttccagggcGGGCAGTTGG
TCTGCGACTGCAGTCGGTGGCGACCCGAAggttcctctttcgatagctac
cTACCCgagaaggtaggggagggcacctctctttctccctggattactcc
acttacccttgatccttctcttaattgctgatcatcaagcagagaggcac
caagtaccattttgggaatctttggtatgacccggctgggggttgaaccc
acaacgtGGTGCACCGTACCCGGATAttctaccactgcactatggTCGTT
TTTAAGTGTCTGAAGTAATTAGTAAGGCAAGATTTACAATGGTCGGTTTT
CCCAGAACTCGAACCCTCTACTCTCAAGTCAGAAGACGATAATCTGAATC
ACAGAGCACCAGAaagatttttcatgttttgacgGAAGGCGGAAGGGAGA
ATAAGTCAACCAATTTCAATCGAATTTCTTCTTCCGTAATAGTGGATTCC
CTGATTCCGGCAAAACGTGAAAAACCTCCACTATCTGTTAGCATGCCAGC
AACCTAAAGAGGCGACAGCTCGGTAGAGCAGCAATATATTTCTTTCGCAA
CAAAGTTTGCTAAGAGCATGGTCTGTTGACTTTCAAACTTACTTCACATT
TATTTCTCACTACAGGTACAAGAAAAATCGCCCGCGCGCACGAACAGAAA
AACGCCCATCGTTACGTCCAAGAGCAACCGATTTGAGACGATCGTTAAGC
TTTTCAGACCTTTTAGATGTGCCTGCTACAAATACAGGTAGATATTCACA
GTTGGGACTTTTTTATAGGGAATAAGGATAATACCTTTTCTTTCGACCGT
GAAAAACTATGAATTATAAGTACTCTGCAAATTAACTCCGGTggtaaaaa
tgcaaaatatgCTTGTTAGGTCAATCGAAGTTATGGCGCAGTAGTGTCGT
GGTTATCAGCCTTGACTTCCGTGCAGGAGGTCGGGTTTCAATTCCTACTC
GGTGCTGTGATTCACTTgacaagtgaatgtaccttcgtGAGTGGAATTGG
GTACCACGCCCTAATACAAGAGTGTGGGACATATGCTTGTGATAggcatt
ttcataaattattgtCAGTGCAACAACTGCCTCGTTCTGTAACCATTGCC
AATGTGATTAAGTCTTCAAGTTTTGCTTTGATGAATAGAGTAAACTTCTT
ATGAACTCTTTTGGAAAttaattaccatagcaatattttgaaaacgaggt
aagcattgctcgtgacgtaatttatgaaaaggtctattgcaaaTACTTGT
TAGGTTCGACCATGCGAGGATGCAATTCCCAAATCATTTGAGTATAGTTA
CTATACTCTAAAACTTGTGTATTTCGAAACCACGAGTTTAATTTACCCTA
TCCTAGGATAGTGGTTTTTGTCCTGGATACGGCCTTTTCCGTCCCCCAGA
AGGACTTTCTCTCCAATCTCTGCGTATATTATTTATTTCGCTTTTCGGTT
CCTTTACTTTGGTGTGTGTTTCTTGATATCGAATATTTCAActcttgtat
caaccattatGTTTTCAGAGCATTCGCCACGAAATTCTGGTTACTTTGAA
TCAAATCACTATGGTTTGCTCACGTTCGACCACGATATGAAACCAACAAA
CTCCATAGTGAAAGCAGAAATCCCCATATTGAAACCAGCAAACCCCATAG
TGAAAGCAGAAATCTCCACCGcggaaaatcttatttttgagGGAGAGGGA
ACTCAGACAGTTGATGAAATTGATTGTAAACAGTCAAATAACTTTCacac
aaattctgaaaattataTGGTTGACTCTTCAATCTCATATGGTGATTCAA
ATCCCTTGGCTATTTCACCAATTCCCAATGGGGAATCTACTCCTGGATAT
GATAGGACAATTTCAGAGGTAGAAACATACGGAAGCGAAGAGAATTTTAC
CGAGCTGATTTTCCCATCTAAGATAGACGCGAACAACAACGAGGAAACTC
TTTTCACAANTTTCAGAGGTAGAAACATACGGAAGCGAAGAGAATTTTAC
CGAGCTGATTTTCCCATCTAAGATAGACGCGAACAACAACGTGGAAACTC
TTTTCACAATGGGAAACGAAGAAAATCACAATGAGGAATTAGACGAATTC
CCTAATTATAACTCCCTTAATTTCAAACGAGAAAGTCAACTATCTGATGA
TATATTTTATGATAACTCCATAACAATTGATTACCATGGGGATGCATCAG
ATCACACTAATGATAAAGAAGTAGCAAGACTGAGGAAAAAGAGTAGCCAC
CAGTATGGGAAATACAGCAATCACAGCTTGAGTTACGACCCAGCTAGTGA
AAAAGAATcagaaaaagaaaggaaaagaagCAGCCATGAGTATGGAAATT
ACGATAACCATCAGTTAGCTTGTGATTCCACAGAGGTGAAACCTGATTCT
CCTAAGGAAAAGCACGtagaaaaacaaaggaaaagaaGCAATCATGAGTA
CGGAAATTATGATAACCATCAGTTAGCTTGTGATTCCACAGGAGGAAAAC
CTGATTCCCCTAAGGAAAAGCACGCAGAAAGACAAAGGAAAAGAAGCAGC
CACCAATATGGGAAATACGACAATCACCGTTTGAGTTTCACTTCCCATGG
GGAAACATCTGATACCCTTAGTGAAAAGGAGATTGCTAGACAGAGGAAAA
GAAGTAATCACCAATATGGGAAATATGATAATCACCGTTTAAGTTATCGA
AGTAGAAGTTCAACCGAATATTATG

Coding sequence (CDS) from alignment at sc0000098:87295..95319+

>TCONS_00009694 ID=TCONS_00009694|Name=TCONS_00009694|organism=Clytia hemisphaerica|type=CDS|length=7902bp|location=Sequence derived from alignment at sc0000098:87295..95319+ (Clytia hemisphaerica)
GATGACCAAGAACTGAGATGCACTGATGAAGGGGAAGAGAAAAAGAATTG
GGACATGGTTTTCATGGAAGGATATTTAAAGAAATTCGGCAAAAAGCGTA
ACAAGAGGCGTTATTATGTCTTACATCACCAATCAAGTGAATGGAAAACT
AGACTGGATTGTTTCGAGAATGAGAAGAAATACAAGGCTAGTTTACCTCC
AAGACGCACCATCTACCTTGCAGACCTTTTTGATGTTGTTGCCATGGATT
CCAGACGGTTCCCTTGCTCCTTTACTCTTTTCACCAATCAAGAGAAAATC
TCTCTGACAGCTGATAATGAGaaacaaaaactaatttggaTCAATGTTat
taaattcaacaaaaatcaGGAGAAACAACCTCAGTTATGTGCCGCAGtgg
AGGAGAAAAAATGGAATGtcgtcattcaaaaacattccaTTGCTCAGGAC
AACTCATACCAAGTTGAAATGTGCTCTCAAGCAATAGACTTTATCGACTC
TTGTGATGATATTGCAATTTCTATTCCCATGGAAACCATTATTAAATATG
GCTACACTGAAGACTCCTGCTATCTTGAGGTCAAGTGTTCTGTTTCCATT
GGTGATGCCTCGCTTATTGATGAAGCTTCAGTGATTTGGTTGAAAATGGA
CGGGGATGATGAGGCAGAGGAATTCTGTGAAAATATCAAAGAGTACAAGA
AAAATCGCCCGCGCGCACGAACAGAAAAACGCCCATCGTTACGTCCAAGA
GCAACCGATTTGAGACGATCGTTAAGCTTTTCAGACCTTTTAGATGTGCC
TGCTACAAATACAGAGCATTCGCCACGAAATTCTGGTTACTTTGAATCAA
ATCACTATGGTTTGCTCACGTTCGACCACGATATGAAACCAACAAACTCC
ATAGTGAAAGCAGAAATCCCCATATTGAAACCAGCAAACCCCATAGTGAA
AGCAGAAATCTCCACCGcggaaaatcttatttttgagGGAGAGGGAACTC
AGACAGTTGATGAAATTGATTGTAAACAGTCAAATAACTTTCacacaaat
tctgaaaattataTGGTTGACTCTTCAATCTCATATGGTGATTCAAATCC
CTTGGCTATTTCACCAATTCCCAATGGGGAATCTACTCCTGGATATGATA
GGACAATTTCAGAGGTAGAAACATACGGAAGCGAAGAGAATTTTACCGAG
CTGATTTTCCCATCTAAGATAGACGCGAACAACAACGAGGAAACTCTTTT
CACAANTTTCAGAGGTAGAAACATACGGAAGCGAAGAGAATTTTACCGAG
CTGATTTTCCCATCTAAGATGACCAAGAACTGAGATGCACTGATGAAGGG
GAAGAGAAAAAGAATTGGGACATGGTTTTCATGGAAGGATATTTAAAGAA
ATTCGGCAAAAAGCGTAACAAGAGGCGTTATTATGTCTTACATCACCAAT
CAAGTGAATGGAAAACTAGACTGGATTGTTTCGAGAATGAGAAGAAATAC
AAGGCTAGTTTACCTCCAAGACGCACCATCTACCTTGCAGACCTTTTTGA
TGTTGTTGCCATGGATTCCAGACGGTTCCCTTGCTCCTTTACTCTTTTCA
CCAATCAAGAGAAAATCTCTCTGACAGCTGATAATGAGaaacaaaaacta
atttggaTCAATGTTattaaattcaacaaaaatcaGGAGAAACAACCTCA
GTTATGTGCCGCAGtggAGGAGAAAAAATGGAATGtcgtcattcaaaaac
attccaTTGCTCAGGACAACTCATACCAAGTTGAAATGTGCTCTCAAGCA
ATAGACTTTATCGACTCTTGTGATGATATTGCAATTTCTATTCCCATGGA
AACCATTATTAAATATGGCTACACTGAAGACTCCTGCTATCTTGAGGTCA
AGTGTTCTGTTTCCATTGGTGATGCCTCGCTTATTGATGAAGCTTCAGTG
ATTTGGTTGAAAATGGACGGGGATGATGAGGCAGAGGAATTCTGTGAAAA
TATCAAAGAGTACAAGAAAAATCGCCCGCGCGCACGAACAGAAAAACGCC
CATCGTTACGTCCAAGAGCAACCGATTTGAGACGATCGTTAAGCTTTTCA
GACCTTTTAGATGTGCCTGCTACAAATACAGAGCATTCGCCACGAAATTC
TGGTTACTTTGAATCAAATCACTATGGTTTGCTCACGTTCGACCACGATA
TGAAACCAACAAACTCCATAGTGAAAGCAGAAATCCCCATATTGAAACCA
GCAAACCCCATAGTGAAAGCAGAAATCTCCACCGcggaaaatcttatttt
tgagGGAGAGGGAACTCAGACAGTTGATGAAATTGATTGTAAACAGTCAA
ATAACTTTCacacaaattctgaaaattataTGGTTGACTCTTCAATCTCA
TATGGTGATTCAAATCCCTTGGCTATTTCACCAATTCCCAATGGGGAATC
TACTCCTGGATATGATAGGACAATTTCAGAGGTAGAAACATACGGAAGCG
AAGAGAATTTTACCGAGCTGATTTTCCCATCTAAGATAGACGCGAACAAC
AACGAGGAAACTCTTTTCACAANTTTCAGAGGTAGAAACATACGGAAGCG
AAGAGAATTTTACCGAGCTGATTTTCCCATCTAAGATGACCAAGAACTGA
GATGCACTGATGAAGGGGAAGAGAAAAAGAATTGGGACATGGTTTTCATG
GAAGGATATTTAAAGAAATTCGGCAAAAAGCGTAACAAGAGGCGTTATTA
TGTCTTACATCACCAATCAAGTGAATGGAAAACTAGACTGGATTGTTTCG
AGAATGAGAAGAAATACAAGGCTAGTTTACCTCCAAGACGCACCATCTAC
CTTGCAGACCTTTTTGATGTTGTTGCCATGGATTCCAGACGGTTCCCTTG
CTCCTTTACTCTTTTCACCAATCAAGAGAAAATCTCTCTGACAGCTGATA
ATGAGaaacaaaaactaatttggaTCAATGTTattaaattcaacaaaaat
caGGAGAAACAACCTCAGTTATGTGCCGCAGtggAGGAGAAAAAATGGAA
TGtcgtcattcaaaaacattccaTTGCTCAGGACAACTCATACCAAGTTG
AAATGTGCTCTCAAGCAATAGACTTTATCGACTCTTGTGATGATATTGCA
ATTTCTATTCCCATGGAAACCATTATTAAATATGGCTACACTGAAGACTC
CTGCTATCTTGAGGTCAAGTGTTCTGTTTCCATTGGTGATGCCTCGCTTA
TTGATGAAGCTTCAGTGATTTGGTTGAAAATGGACGGGGATGATGAGGCA
GAGGAATTCTGTGAAAATATCAAAGAGTACAAGAAAAATCGCCCGCGCGC
ACGAACAGAAAAACGCCCATCGTTACGTCCAAGAGCAACCGATTTGAGAC
GATCGTTAAGCTTTTCAGACCTTTTAGATGTGCCTGCTACAAATACAGAG
CATTCGCCACGAAATTCTGGTTACTTTGAATCAAATCACTATGGTTTGCT
CACGTTCGACCACGATATGAAACCAACAAACTCCATAGTGAAAGCAGAAA
TCCCCATATTGAAACCAGCAAACCCCATAGTGAAAGCAGAAATCTCCACC
GcggaaaatcttatttttgagGGAGAGGGAACTCAGACAGTTGATGAAAT
TGATTGTAAACAGTCAAATAACTTTCacacaaattctgaaaattataTGG
TTGACTCTTCAATCTCATATGGTGATTCAAATCCCTTGGCTATTTCACCA
ATTCCCAATGGGGAATCTACTCCTGGATATGATAGGACAATTTCAGAGGT
AGAAACATACGGAAGCGAAGAGAATTTTACCGAGCTGATTTTCCCATCTA
AGATAGACGCGAACAACAACGAGGAAACTCTTTTCACAANTTTCAGAGGT
AGAAACATACGGAAGCGAAGAGAATTTTACCGAGCTGATTTTCCCATCTA
AGATGACCAAGAACTGAGATGCACTGATGAAGGGGAAGAGAAAAAGAATT
GGGACATGGTTTTCATGGAAGGATATTTAAAGAAATTCGGCAAAAAGCGT
AACAAGAGGCGTTATTATGTCTTACATCACCAATCAAGTGAATGGAAAAC
TAGACTGGATTGTTTCGAGAATGAGAAGAAATACAAGGCTAGTTTACCTC
CAAGACGCACCATCTACCTTGCAGACCTTTTTGATGTTGTTGCCATGGAT
TCCAGACGGTTCCCTTGCTCCTTTACTCTTTTCACCAATCAAGAGAAAAT
CTCTCTGACAGCTGATAATGAGaaacaaaaactaatttggaTCAATGTTa
ttaaattcaacaaaaatcaGGAGAAACAACCTCAGTTATGTGCCGCAGtg
gAGGAGAAAAAATGGAATGtcgtcattcaaaaacattccaTTGCTCAGGA
CAACTCATACCAAGTTGAAATGTGCTCTCAAGCAATAGACTTTATCGACT
CTTGTGATGATATTGCAATTTCTATTCCCATGGAAACCATTATTAAATAT
GGCTACACTGAAGACTCCTGCTATCTTGAGGTCAAGTGTTCTGTTTCCAT
TGGTGATGCCTCGCTTATTGATGAAGCTTCAGTGATTTGGTTGAAAATGG
ACGGGGATGATGAGGCAGAGGAATTCTGTGAAAATATCAAAGAGTACAAG
AAAAATCGCCCGCGCGCACGAACAGAAAAACGCCCATCGTTACGTCCAAG
AGCAACCGATTTGAGACGATCGTTAAGCTTTTCAGACCTTTTAGATGTGC
CTGCTACAAATACAGAGCATTCGCCACGAAATTCTGGTTACTTTGAATCA
AATCACTATGGTTTGCTCACGTTCGACCACGATATGAAACCAACAAACTC
CATAGTGAAAGCAGAAATCCCCATATTGAAACCAGCAAACCCCATAGTGA
AAGCAGAAATCTCCACCGcggaaaatcttatttttgagGGAGAGGGAACT
CAGACAGTTGATGAAATTGATTGTAAACAGTCAAATAACTTTCacacaaa
ttctgaaaattataTGGTTGACTCTTCAATCTCATATGGTGATTCAAATC
CCTTGGCTATTTCACCAATTCCCAATGGGGAATCTACTCCTGGATATGAT
AGGACAATTTCAGAGGTAGAAACATACGGAAGCGAAGAGAATTTTACCGA
GCTGATTTTCCCATCTAAGATAGACGCGAACAACAACGAGGAAACTCTTT
TCACAANTTTCAGAGGTAGAAACATACGGAAGCGAAGAGAATTTTACCGA
GCTGATTTTCCCATCTAAGATGACCAAGAACTGAGATGCACTGATGAAGG
GGAAGAGAAAAAGAATTGGGACATGGTTTTCATGGAAGGATATTTAAAGA
AATTCGGCAAAAAGCGTAACAAGAGGCGTTATTATGTCTTACATCACCAA
TCAAGTGAATGGAAAACTAGACTGGATTGTTTCGAGAATGAGAAGAAATA
CAAGGCTAGTTTACCTCCAAGACGCACCATCTACCTTGCAGACCTTTTTG
ATGTTGTTGCCATGGATTCCAGACGGTTCCCTTGCTCCTTTACTCTTTTC
ACCAATCAAGAGAAAATCTCTCTGACAGCTGATAATGAGaaacaaaaact
aatttggaTCAATGTTattaaattcaacaaaaatcaGGAGAAACAACCTC
AGTTATGTGCCGCAGtggAGGAGAAAAAATGGAATGtcgtcattcaaaaa
cattccaTTGCTCAGGACAACTCATACCAAGTTGAAATGTGCTCTCAAGC
AATAGACTTTATCGACTCTTGTGATGATATTGCAATTTCTATTCCCATGG
AAACCATTATTAAATATGGCTACACTGAAGACTCCTGCTATCTTGAGGTC
AAGTGTTCTGTTTCCATTGGTGATGCCTCGCTTATTGATGAAGCTTCAGT
GATTTGGTTGAAAATGGACGGGGATGATGAGGCAGAGGAATTCTGTGAAA
ATATCAAAGAGTACAAGAAAAATCGCCCGCGCGCACGAACAGAAAAACGC
CCATCGTTACGTCCAAGAGCAACCGATTTGAGACGATCGTTAAGCTTTTC
AGACCTTTTAGATGTGCCTGCTACAAATACAGAGCATTCGCCACGAAATT
CTGGTTACTTTGAATCAAATCACTATGGTTTGCTCACGTTCGACCACGAT
ATGAAACCAACAAACTCCATAGTGAAAGCAGAAATCCCCATATTGAAACC
AGCAAACCCCATAGTGAAAGCAGAAATCTCCACCGcggaaaatcttattt
ttgagGGAGAGGGAACTCAGACAGTTGATGAAATTGATTGTAAACAGTCA
AATAACTTTCacacaaattctgaaaattataTGGTTGACTCTTCAATCTC
ATATGGTGATTCAAATCCCTTGGCTATTTCACCAATTCCCAATGGGGAAT
CTACTCCTGGATATGATAGGACAATTTCAGAGGTAGAAACATACGGAAGC
GAAGAGAATTTTACCGAGCTGATTTTCCCATCTAAGATAGACGCGAACAA
CAACGAGGAAACTCTTTTCACAANTTTCAGAGGTAGAAACATACGGAAGC
GAAGAGAATTTTACCGAGCTGATTTTCCCATCTAAGATGACCAAGAACTG
AGATGCACTGATGAAGGGGAAGAGAAAAAGAATTGGGACATGGTTTTCAT
GGAAGGATATTTAAAGAAATTCGGCAAAAAGCGTAACAAGAGGCGTTATT
ATGTCTTACATCACCAATCAAGTGAATGGAAAACTAGACTGGATTGTTTC
GAGAATGAGAAGAAATACAAGGCTAGTTTACCTCCAAGACGCACCATCTA
CCTTGCAGACCTTTTTGATGTTGTTGCCATGGATTCCAGACGGTTCCCTT
GCTCCTTTACTCTTTTCACCAATCAAGAGAAAATCTCTCTGACAGCTGAT
AATGAGaaacaaaaactaatttggaTCAATGTTattaaattcaacaaaaa
tcaGGAGAAACAACCTCAGTTATGTGCCGCAGtggAGGAGAAAAAATGGA
ATGtcgtcattcaaaaacattccaTTGCTCAGGACAACTCATACCAAGTT
GAAATGTGCTCTCAAGCAATAGACTTTATCGACTCTTGTGATGATATTGC
AATTTCTATTCCCATGGAAACCATTATTAAATATGGCTACACTGAAGACT
CCTGCTATCTTGAGGTCAAGTGTTCTGTTTCCATTGGTGATGCCTCGCTT
ATTGATGAAGCTTCAGTGATTTGGTTGAAAATGGACGGGGATGATGAGGC
AGAGGAATTCTGTGAAAATATCAAAGAGTACAAGAAAAATCGCCCGCGCG
CACGAACAGAAAAACGCCCATCGTTACGTCCAAGAGCAACCGATTTGAGA
CGATCGTTAAGCTTTTCAGACCTTTTAGATGTGCCTGCTACAAATACAGA
GCATTCGCCACGAAATTCTGGTTACTTTGAATCAAATCACTATGGTTTGC
TCACGTTCGACCACGATATGAAACCAACAAACTCCATAGTGAAAGCAGAA
ATCCCCATATTGAAACCAGCAAACCCCATAGTGAAAGCAGAAATCTCCAC
CGcggaaaatcttatttttgagGGAGAGGGAACTCAGACAGTTGATGAAA
TTGATTGTAAACAGTCAAATAACTTTCacacaaattctgaaaattataTG
GTTGACTCTTCAATCTCATATGGTGATTCAAATCCCTTGGCTATTTCACC
AATTCCCAATGGGGAATCTACTCCTGGATATGATAGGACAATTTCAGAGG
TAGAAACATACGGAAGCGAAGAGAATTTTACCGAGCTGATTTTCCCATCT
AAGATAGACGCGAACAACAACGAGGAAACTCTTTTCACAANTTTCAGAGG
TAGAAACATACGGAAGCGAAGAGAATTTTACCGAGCTGATTTTCCCATCT
AA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005422XLOC_005422Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009694-proteinTCONS_00009694-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009694-exon-sc0000098-1491911889:87295..87391TCONS_00009694-exon-sc0000098-1491911889:87295..87391Clytia hemisphaericaexon
TCONS_00009694-exon-sc0000098-1510915933:87295..87391TCONS_00009694-exon-sc0000098-1510915933:87295..87391Clytia hemisphaericaexon
TCONS_00009694-exon-sc0000098-1575043694:87295..87391TCONS_00009694-exon-sc0000098-1575043694:87295..87391Clytia hemisphaericaexon
TCONS_00009694-exon-sc0000098-1491911889:87932..88232TCONS_00009694-exon-sc0000098-1491911889:87932..88232Clytia hemisphaericaexon
TCONS_00009694-exon-sc0000098-1510915933:87932..88232TCONS_00009694-exon-sc0000098-1510915933:87932..88232Clytia hemisphaericaexon
TCONS_00009694-exon-sc0000098-1575043694:87932..88232TCONS_00009694-exon-sc0000098-1575043694:87932..88232Clytia hemisphaericaexon
TCONS_00009694-exon-sc0000098-1491911889:88881..89062TCONS_00009694-exon-sc0000098-1491911889:88881..89062Clytia hemisphaericaexon
TCONS_00009694-exon-sc0000098-1510915933:88881..89062TCONS_00009694-exon-sc0000098-1510915933:88881..89062Clytia hemisphaericaexon
TCONS_00009694-exon-sc0000098-1575043694:88881..89062TCONS_00009694-exon-sc0000098-1575043694:88881..89062Clytia hemisphaericaexon
TCONS_00009694-exon-sc0000098-1491911889:89659..89771TCONS_00009694-exon-sc0000098-1491911889:89659..89771Clytia hemisphaericaexon
TCONS_00009694-exon-sc0000098-1510915933:89659..89771TCONS_00009694-exon-sc0000098-1510915933:89659..89771Clytia hemisphaericaexon
TCONS_00009694-exon-sc0000098-1575043694:89659..89771TCONS_00009694-exon-sc0000098-1575043694:89659..89771Clytia hemisphaericaexon
TCONS_00009694-exon-sc0000098-1491911889:93210..93331TCONS_00009694-exon-sc0000098-1491911889:93210..93331Clytia hemisphaericaexon
TCONS_00009694-exon-sc0000098-1510915933:93210..93331TCONS_00009694-exon-sc0000098-1510915933:93210..93331Clytia hemisphaericaexon
TCONS_00009694-exon-sc0000098-1575043694:93210..93331TCONS_00009694-exon-sc0000098-1575043694:93210..93331Clytia hemisphaericaexon
TCONS_00009694-exon-sc0000098-1491911889:94113..95319TCONS_00009694-exon-sc0000098-1491911889:94113..95319Clytia hemisphaericaexon
TCONS_00009694-exon-sc0000098-1510915933:94113..95319TCONS_00009694-exon-sc0000098-1510915933:94113..95319Clytia hemisphaericaexon
TCONS_00009694-exon-sc0000098-1575043694:94113..95319TCONS_00009694-exon-sc0000098-1575043694:94113..95319Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000098supercontigsc0000098:87295..95319 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0385628	0.112814	0.0221565	0.0427172	0.105557	0.170814	0.0503169	0.278489	0.23086	0.163404	0	0	2.09646	1.80826	0.212377	0.195354	0.36099	0.207702	3.60637	1.85933	0.374511	0.735463	0.29168	0.63235	0.975218	0.767964	0.146528	0.056432	0.684827	0.7613
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR011993PH_dom-like
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009694 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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