XLOC_005243 (gene) - C. hemisphaerica

Overview
NameXLOC_005243
Unique NameXLOC_005243
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000093:323736..327430+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005243 ID=XLOC_005243|Name=XLOC_005243|organism=Clytia hemisphaerica|type=gene|length=3695bp|location=Sequence derived from alignment at sc0000093:323736..327430+ (Clytia hemisphaerica)
ATTTTGTAACCACAAGTAATGATATGGATAGATTACCTAGCACTTCCATA
CTTGATCCACCACCATCATACGAGGCGTCCATTAATAAACAGCACCATAA
CAACGGAGCTCCAGTCGAGCGGCATGACATTGAAGGTCAACAAAATAGGA
GTGAAGGTAAGCGTACatttctttatttattttttgtttaataaTTTCGT
TTGTCCGTTTATTAGTTGTATATTCATTTTTTTGGTTGGATTGAAGTGAG
TTAAAACAACACCAAGTTTGgtatttttaaaataatctaAAATTCTCTGC
AAATTTGCTTAAGATGATTAATTACAAGTGATAATTCTATATAATTTGTA
TATTCTTTTTGTCGCGCATAAAGGAACTTAACATAACATTAGCAGCGTAA
ATTGGTACTTAAATATATTAATGGCTTGAAACACATCCAGAATTTTgatc
attcaaaaattttatggtttttggaataagtccaaaaaaagaagaaaaaa
tgttctaaatgtggttggaatgttttgaaaatttcttatttttagcaTTA
TCAGCATTTTGCATCTGCAATGCTTttaaagccttcaaatgtttttttct
tttgacctcAAAGTATAACATTCTTAAACTTTGTCTTATAAGTAAACCTA
ATAAGGCTCAGATTGGCCAGGTCTTTGTAAAATTGAGGGGTTCTTATAAA
ACTCACCGGACGGAAAAAAAGAAGCCAAAACTTTGAATGCATTTTTAAAT
TACAACGAGatataaagaagaagaagaagagcatAGGAAGGCCTATGCTA
AAGGGAATAGGCCTCCTGAAAATAGTCAAGAGAATCACAGCGCAAACAGA
TAACAACGAGATATACCACCTGACAAATCCATCTATCTTGCAAAATGACT
TCCAATCCGCTTTTGGATAAGGAAGAAATAAAACGCTTTCGAAAGAGAGA
AAGAAAACATTCGGCAACAACGTGGTGTTGAAAGTAGATACAGTgaacgc
tctctaattcgatggtatactattcgatacgctttattattcgataatat
tgaaaaagtCCCTGTCGacaagaaactcttataaacaacgctctactatt
cgatgcgctcccttattcgatgaaaatcagattccccttgaaaatcgaat
tagagagcgtcaactgtactttaAAAGGTTGATAGTTCCTTGTATTCTTG
TATATTTTGACATAGCAAAAAGATCGTAGTTTTAAAAAAGCCTCGTATTT
TTCTTTCGAGGTTCGGAATTTTTTTCTGAGGTAATTCTATCTACCTAACA
ATTAAAACAAGAGACGGGAAATTTTTTTCGTGATCATAACAATATGTACA
TCgacaaaatttgatttcattATAAATAATTTACGACTACCGTTCGATGA
AACCTCTCACAGGTTTTATTTTTCCTGCTCAACAACGCACCTCTGTTTcc
aaaaccaaataaaaatattgaatctCTATTGGTTATCGGAAATGCTACTC
TCACATACACTTCCTGCTCAACAACACCTACGtttccaaaacaaaataaa
aatattgaatctCTATTGGTTATCGGAAATGTTACTCTCACATACAAACA
AACAACTTTCTATCTATGATAAATGCTGTTGATATTGTTGTTTATTTCGG
TGTCACTGAACttatgccccccccccaaaaaaaaaaaaaacttttatttt
ttacttaaaggtttttttgtttttgttttttttcgtgTGGCTGgaccttc
cccccccccccaatatcaaaatgcttcctacggcactgtatcTGTTACGA
TTCTGTACCTAATTTCCGTATTATATATTGATATATTGACATGGTGACTA
AAAGGAGACAAGACACTCAGCCATACCAACCTATAGAAAGTAAAcattac
acccctgtatcacaaaCCCGATGGGACCCCAGCGCCACTGGGAAATGTAC
TCAAAATTTCGTCTCCAGTTGAAAAAATACCCTACTACAATTTCAgcatt
tcagccccacttggaaaAGGAATTCTTTTCATTCCCACTTAAAATTCAAC
ggaaaaattgcactccgaTTAACCacccccactggaattttcgggaaatg
atcaaaatcaaaattaaaccaACCTACGCTATTTCAATCCTATCGATTTT
TGACAGTTGTTGGTTCGCCTATAGCCTTCTTTTGTTtggcaaaaaatgta
aattttgcttaATGTAGGAGTTTTGGTGGTGGGCTATCAACTTCAATGTC
CAGGAAAGAATAGAATTATTTTTAGTAAGACATTTTAAGAATCTTGATAA
AATATTACTTCCTTAAACTTGACCTAGTCTAAATTATTTCTAATCCATCG
AGAATCAATCTACGCACAaggttgttttgatgttttaaagGACCGATGGC
CGGTTTGAATCTCCACTTACTCCAATGTTCCGTACAGTTCTTAGATAGCC
GTACTAGCTTCCCCACAAACCTCGTTTAAATAATCGAAAGACAAAAgtca
gatttcacttttattggtagaaagaaaagaaGGGGTGAGACAAAATTCGA
TGAGACACGAGAAAGAGTTTCAGgttgggatggagcatgttgcattccac
caacgcgaaaaaaaacttctcgtccCAAGCCTTTAGACTTGCTCTTTTTT
TACTGTCCGGCGCCAATTAAACTGGGAGGGGCTAATTATGAANTCGTCCC
AAGCCTTTAGACTTGCTCTTTTTTTACTGTCCGGCGCCAATTAAACTGGG
TGGGGCTAATTATGAACGTGCATTGAAATAAAGACGAAGATAGTTTCTTT
ACCGGATATTTGGAAAATGGTTACTAGCTTCTTTAAGCTACTATAACAAA
AGACTAAATTTTAGAATGATTTCCTGCATTACAAATGTTTTGCCGCAAAT
TCTATAAATTTCCTTAATTGgatgttttgaaaaacattaaCCGGAAATTC
CAGGGCAAAATTGCATCCTACGTTCGTGACTTCATTATGAGATGCTTCGA
ATTCTAATTTCATATTTCTGTTTCCCCCAAGGTTACAAACAAATTCGTCT
ATTTTTAGCTTGcttaaattagatttttgaaagtttacATGATGAGCCAG
GACAGAAATTTGACACTGGGGTTCAGGAAAAAATTAAGGGTTGAATATGG
GGGAAATACAAATTCATTAATCgtattccaattttttttgaaaataaatc
gcGAAACtcgtgaaatatttttcacacaAATTGAtccctttctttttttt
aaggtGAAGCAGACGAAAGCCTTCAATCTACCACTGGCGTGCCACCACCC
TCGTACAAGACTGCAAGTATGGTCAACcaatgaagaaattttcgtaTGAG
GACGAGGAGGCACCATCGGTTAACGACGCAATAGGGCCGATGACTTGAAA
CCCCTagtcaatacaccttttcgaccgtagccgccaattttttctttgtt
ttaccaCCGTCCTAGTCTTTTTTtcacacctatagacaatagataaaagg
tgtcaaaaaaggattggatcgagtttaaggGGAAAAATACCCGCGTgtca
attggtggctacggtcgaaaaggtgtattagttTCCTTCACTAACTTGGA
CTGGATACGATCGCCGGacttaattttttcaagttttcgaGTATACGGAC
GCAGTAGTACACATATAGAAACTCTTTACAGACAAAGAATCAGGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009360TCONS_00009360Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000093supercontigsc0000093:323736..327430 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.18	0.89	0.72	0.71	0.49	0.29	0.47	0.55	0.15	0.48	0.28	0.06	0.24	0.06	15.23	5.41	0.14	0.35	0.39	0.2	0	0	0	0.19	0.1	0.09	0.13	0	0	0