XLOC_005166 (gene) - C. hemisphaerica

Overview
NameXLOC_005166
Unique NameXLOC_005166
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000091:487478..490819+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005166 ID=XLOC_005166|Name=XLOC_005166|organism=Clytia hemisphaerica|type=gene|length=3342bp|location=Sequence derived from alignment at sc0000091:487478..490819+ (Clytia hemisphaerica)
aaaatgttttttttgctacATTAGGTTTATATACCGGACGAGATCTGTAT
TTACATTTAATGATTTTAGAgctattttgtatttaaaaattattttaata
tagatattttcaaaattttcttaagtATTTGAATGTATATAGAAATTATG
GACGAAGTGTCTGGGAACAAAAGCCTGGCACAACAAAGGACAGATTGTTT
GATATTGTTGAAGTACATAACAAAGAtcccattttcaaaacatacaaAGG
GATTGCTGTCCATGAGACCAGGCAAGAAGATACCAAACAGTAAAGGCGTC
ACTCACAACAAGTTCAGGCTTATGGTCATGTGATTGGAACAAGGCAGTAT
ATTGAAGAAGGTAATTATAGTTTATTGCTTCAAGGAAAGACCTATTTAGA
ATGTATTTGTCCGAAGTCAACGTAAATTCTTGGTTTAACTTAAAGAGAAT
CTTTTACTCTAATCGAACCGAtattagggagtggtcagaaagtatctact
agggggggggggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNAGAAAGATTGCCCTTCCGTGTGACAGAAGATCTTAcgaaaagtg
aaaggaagacAATCAAAGAGTGGTGTATGAAAGCCCAAGAAATGAACACG
TCACTAAAGAatgcaaactttaaattcaaagtcaggggagccctaggaaa
aaactctatcttaagaaaattgtaaactgaacaaagagcggttcatagag
gcccatgtgctcgcacggtggcctgcgaacttgtatatcattattattat
tattatgttaTTAATCAGTCAGTTAGAGTGTAGGGAAAAATTAGCAAGGG
GGGGGGTGTGAAATTATTTTAATACTTTtgagggggttggaaaatttttt
ccaggttTGGGGTGGTagtgcgaaattttttttaatttttagaaatatcC
TCCAGTCCCCCCTAGtggatactttctgaccacttcCTTACATGTTCAGT
AATTTTAAGGGTTACGTTCTTGTAAGGGGATGAGCTAAAATGGAGTGGAC
GTCAAAGCTTGTATGTAATAATAGTTACCGAAGCTTGCTGaatctttatc
aaattttcataatttttcaaactttcaaatctTTATTTCTCAACAAACAG
ATTGGCGAAAGAAACATTTCATTTGGTCTTTATTGAAATGACGAATCATG
AAGACCATTCCATTAACAAGCTCGTGTAATGACTTTCGCTCAAACATTTT
CATTGCTTGCCACAAGTAAGTTAAATTAAAGGATCTACTTCAAATATGCA
AGGCAATCTACAACATATGCCATGGTGCTCTAAGTAAACAGACTTAAAAC
AGTAAAGATTATTAAAGTAAAGTAAAGGTCATTCACATCAAGTAAAGCCT
GAATTTATGTGGTGAAAATTGGGCCAATTCAATAATTTCATGCAATTCGG
TGGAATTTATATTAGCGAGTGAACCAGATTTTTGGCTTTATTTTCAGCCA
CTTAATccacttaaagggataatcagatagtATGCAATATTTGGCACGTG
GGTTcttctattgtcctgagcaaattctcaaaatattttttcctaacTAT
GTATTACCCAaagttttttggcttttagaggatgaaaacaatagaatttc
aaagtAAGAACCGTGTAAAAAcccattttctaaaatttcacattttgatA
TCTCAAAATctttggaaaattgttacacaaTAATACTTTGAGAATTTACC
ATAGACGGCTTCTGCAATCTAAATATCTCATAATTGAAAGCAATTACAGA
ACTAGATTTggcgaaaataaattttagtgaCCGACCATAAAAAGAATCAA
CGTAGTGGGAAgaaattttaggcaaaattataaatttcttctcgcgaaaa
tttcttcccttaaaatTTAGTAGCAAAGAATCAAAAATTCATTACCTCCT
TCTTATAGGTGGACAAATTTTGGACAATGATGAGGAATGCAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009202TCONS_00009202Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000091supercontigsc0000091:487478..490819 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (0.13 tpm) - - (6.8 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.89	1.04	0.94	0.52	2.87	2.27	1.67	1.57	1	1.11	0.6	1.34	2.52	3.59	0.87	1.01	0.27	1	0.63	0.13	0.69	1.67	1.76	1.23	3.17	6.8	1.78	3.12	0.79	1.87