XLOC_004469 (gene) - C. hemisphaerica

Overview
NameXLOC_004469
Unique NameXLOC_004469
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000080:432745..438179-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004469 ID=XLOC_004469|Name=XLOC_004469|organism=Clytia hemisphaerica|type=gene|length=5435bp|location=Sequence derived from alignment at sc0000080:432745..438179- (Clytia hemisphaerica)
ATAAAGAAGAACAGTTGAGGTGACAGTGACAGGAATTCCACAGTGACAGG GCAGCAGTGCTGACAGCTTAACAGTTAGCTGTTAATCAATCAGTAGTAAC AAGACTAGTAGGGGTAAGTCGGAAAATCTGTATTTAGTTACTCCTTTGGA TTTTACTAGTTTTTCTGAAGAGTATAAGCTATACTTACCTCCTTACCTAT CCAGCAGACTTTTATCCCTCGTAACAAATCTATCTATTACTATGGCACGA AATGCTACTCTAGGGATCCTGCGACTGTGATGATCTGATTTGTCCCTTAT TCAGTTCAGCCAAAACATTTAAAACCTTGAAACTCAAGTTCATGATTTAA TCGGGAATAAAATATAATTAAAAAATATAATAAAATCCAATTCCTCACAC TCTTTCAGCCATCTTTACCACATATTTTTTTGTTCTTGTTATTATTATTT TTCTTATTTACATACTCAAGTTATTTGATTCAGTCGCATTTAATTTTATA TCTTACTTATACGAAAGTTCTGGGAACAGCAGTCTGTTCCTCTAAAGAAT CCTGCATTGTAACATGCATGCATAATTTGTCATTCTTAAACCATATGCAG TTAATTCCATGATGATAAACAAAGAGGAATGAACAGTGGTACAGTTGTTA CTTTTGGTCAGGGTTGTGGACGGCAAAATTTGTCGTTCTTTATGAAATTT GTCGTTCTCTTTGTCTATTTTTAGTATATAATCCAGGATTCTTTAGATAA ACCCCCTCACAACTCAGAGGACAAAAACCTGACAAAACATACGAAAAACT GTTCAATAGAGTTCAGTTGAAAAAATTTGTGTCTTTTAGAGGATGTTTTG CCCCTTGGTCCAAATAGGCAGGCTAGCTCTAAAGCTCTAAAACAGCATCT AATAACATGAAAACTAGAATATTATTCTTCAATGGGAATCAGAACTATAA AGTGCACTTACAAACATCAATATGTCAGATTTAACAAAATTAATAACGGC ACTGTCATCATTGACAATAAAACAAACAATTTTCTTTCAAGAGTCTTGTA AACATTCCAACAACTTCGATCGAAATGATCTGTCACTGCAAGTCTACCAT TTTTAGCACGGTCCGAGGATTGAGCCGAGAATGCTCGCAGAACACCCACT AGCTCCCGCGCGGATGATAAACTTTAATCTGTCAATCATTTTCTCAAGCG AAGAGTACACAAAGAGATTCTAACTTTACGATAGTGCCGCGGATCATCAG TGGATAGTATTCAATTATCATCATCCCTTTCTTTTCATTCCTAGAACTTT TACAAAAAAAGGAAAAATAGAAAAGTTTTTTACTGCTTTATTCACATACT GAATTTGAAAGATCTTGTATACTATGTGGCGTTTTTTTTTGCAAACTTCA AAAAACTGATTTTTGTCCCGCTTTGGCGTGACTTTAGCTTAAGTGCTTGC ATACAGCATAGGGTACAAAAGTCCAAATATGCATTTCCCACAATTTTTTT ATATATGAAGAGTTAGGTCTATACTGATAGGGTTGAGACATGCCATAACT CTACCAGACTTGCCAACTTGAGATGTTCATACGCTAAAAAGATAAAAAAT TTCAAGCGAAATCCGAAATCTTAGCCCAGTTTTTCCGACGCCGTCATATA TTTTGAAAATTGACCTCAGAATTTTTTTTGTTAGAAATTCCGTACTCTTC AAACGTCAAGTTCCCTTTTTAGACAGGGGTTTTATGGAGNAATTTAATAA GTGACCCATCAAAATTTAAGTTTATCTTTCTTCTTTTCAATGAAATGGGA ATGGTTCTTTTAAAAATTTTAGATTTCGAAAATATTAGTTTCAAAGAGAG AAACTTTTTTGTGGCGCACCCGGTAGTGTTAATTTTCTTGCTCAATTATG GATGGAAAATAAAATTTTAAACATACAATTAAAACAAAGACGTATATGCA TTGGTTTTTTGAGTTAAAAAAAAGAGATTTTAGTCTCAATACTGCCATGA AATCCTTATTTTAAACTCAAATCAACCTCCTGACAAACTATTCAAAATCA CAGCTGGCCTACAATTTTAGCGTGACAGACACAAAATATGAAATTCTTTT AGTATATCTAGATTGTAACAAAAAAACTCAATGAAAAATTAAAAATGGCA AGGCTTAGTCTGAAGAGATGTTTGATCGGCTTTACATTGATTTTATGTTT TTGGCTTGTATGGAAGGTCAAGTATAAAAATCAAGGATTCATGAAATATC TACCCAAAGTAAATTTCTCATCTGTTGTCACACCATATGAATATCAAATG AAAGGGGATTTTCTACCTCCTCACTTACGTAAACAAAAACTTATCCTTTT CTTCACATCACATTTCTACAGTGACATCTGGAAAGGATTAGGTCCTGATG TATTACCTGGGTACACCCAAAATGCACATTGTAACATTAAAGAATGTTCA ATGACTTATGACAAAAAGAGAATAAACGAGGCAGATCTTGTGATATTTCA TGGTGTAGATTTTGAATATAAGAATTATACTGATAAACATTTCCAAGCAA TGTTAAAGAAGAAACCATCTCATCAACGATGGGTGTTTTGGATGCATGAG ACTCCTGTTTACTATCCAGAACCTGGAAATTATGATAATTTATTCAATTG GACTATGACATTCAGTCAAGGGTCTGATATCTACCACCCATATTACTCTT ACAGAAGGCTAACTGCTGATGATGACAGACCTGGAAAGTACATGAACTAT GCTCTTGGAAGAACAAAGAAAATAGCCTGGATGGTAAGTCATTGTGGTAT GACAAGAGGTGAATATGTTATGGAACTGCAAAAGTATACTGATGTTACTG TTTATGGTTTGTGTGGGGCATCTTATGATAATATGGCAGGCATATGTTCT CGTGTTGAAAGTGAGTGTATGGATCAATTGAATCAATATCGATTTTATCT TGCTTTTGAAAACTCATTTTGTGAAGACTATGTGACAGAAAAGTATTATA AATTTGGCATAATGTATGGTGCTGTACCAATAGTGATGGGCGCTAGATAC AATGCATTGAATTCTATACCAGGGTCTTACATTGATGCTTCCACATTTCC TTCAGTACAAGCTTTAGGAGAATACATTAATTTCCTCAGTGAAAATGATT ATTATTACAATCAATATTTTGAGTGGAAAAATCACTTCAAAATGGACGAT GGAATTGATAAGATTTGTTTACTTTGTCATGCAGCCCATGATGTAACTAG AAAGTCTAGTTTCCATAAACATTTCCATGCTTTTTGGAGCAAACAAGCAA TGTGTGATCCCTATGAACCTGTCATTCAAAAGTTTGGTCACCAAATTGAA CAGTCCAAACTTTCTAGAATAGGCGAAGGTACAAAATCATAGACCTATTT TATAATCAAAACATTATCTTTTTTTTATAACTCTTCCATTTTTACCTTTT GCACTTTATTTTTTAGATTTAGATTTATTTTTTAATCAATACTAAATTTA ATAGTTTTATCAAGTAAAATTACACATCTAGAATTTCTGCCTTGTGTCTT CTTTTTCACTTTGCAGTAGTTTTCTTTAAGGTAGGCAATATTTCCAATTG GTCTTCTTGATAGTATTGTATTCTTTCCTCTTTAATAGATGAATAGTAAA GATAATTAAATGGATATTTCAAAAATAAGAAATAGTTTCCAGCTGAAATT TGGTTTGCATTTTATTTCAAGAACTATAGTAAAAGGTAATACATTTCATT CAAAAATCATATTGCTTCAACCAGAATGCATTACGCAGCTAATACCTAAA CTCGTTACACTGGTGGTGAAATGTATAATCTGTAAAAATCATAAAATTGT TAATAAAAATAGAATGTTTTAAAGAAAGTTACTTGAAACAGAAACCAAAG ATTCATTCTTACCTATGTATCCTATATACTTATTAAAGAGCTGTGAATTA ACCATTCAATTGGAGTGTTTACTCTTTTGTTAGTACTGAACACAGTTGAT GGTCATATTTTCTTTATCAATAGAATATTGCAGAAAAATGAGCAATTACA TGAACTATTCTGAAGCTTCAAAGCTTTATGATGAAGCACGAGTTGCAGCA GATGCTGAAAACATTTACAACATTTTCACTGGGCTTCTCAAGAAACCAGC AAACAAAGTATTTCATTTATCAATGATTTCTTATGTTTGTACATTGAGCC GGTTTGTTAACAACCTCGTTTCCTGCGTATTATCAGCTTTTTATGATTTT TTATCAAAGTATTATTTTGCATGAGCCTACACCAGGGCATTCTCTGGCGT TCATCATTTTTCTTCAAAAACTTTTTAAATAATTCAAAAATAAATATTAT GGTGTATTTTATTGTAATTTTATTGCAATTTTTCTTTAACTTTTAGATCG ATCTTTTGGATATTGGATGTGGTACAGGCAACTACAGTTATTCTTTCATG AAAAATGGTTTACAAAGCATTACCATTGCTGATGCTTCTCAGGAGATGTT AGACTGTGCCAAAATCAAAATGAAAGTATTTGAAGATAAAGTCACTGCAC AAGATATCATTTTACCAAACTTACCATTTCCTGAGAAAAGCTTTGATGTT ATTTCTTGCATGCAGGTTTTACACCATATTGATTCTGCTGCTTTAAAAGA ATCAACCAAGGAACATCTTCAACGGGAAGACTATCCAAACATGCTTGAAA CCTTGAGTCAAGCTTACGATGTTTTAAAACCTGGTGGGGTACTAGTTATT GATGTTATGTTTGAAGAAAATTGTGAAAGCTTTTGGTGGACCAGATTATG TCCAATAGCTGCTAAGGCGTTCAAAAGACTAAGAATGAGCCAAAAGGACA TGATTCAGTCCTTAGAAAAACTTAATTTCANTTGGTGGACCAGATTATGT CCAATAGCTGCTAAGGCGTTCAAAAGACTAAGAATGAGCCAAAAGGACAT GATTCAGTCCTTAGAGAAACTTAATTTTGAGAATATTGTTTGCACATACT TTCCAGGCTCTCGCTTAGTTAAAAAGGAGATTTATGATGAAATTCAATGT ATAGATGATCCTAAATGGAGATATTATCTTTCTCAGTACAAATTGGTTGA AAAGTCTGGTGAATTAGATAACCTAATTAAAATTGTAAAAGACGCAGAGA CTTCTGGAAAACTGAAAGAGTATTTTGACGATTGGAGTGAAAAGCTCTGG ACACATGGGAATCATAGTGCTGTTTTTGCAATGAAGCCTTTAGCATAGAT TTTTGTTTAATTTTTATTAAGTTTGATTTTTCATAAATTTTTCAATTGCT GGTAAAAGACTTATTTATAAATTATTAACTACGGTGAGGGCTAGAAGGTT TATAAAGGTTTTTATACGTTTAGAATTTTTTATAAAGGTCATTTAAATAC ATACACATGTTTTTTCTGGGAAAAATCAATGTATC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007917TCONS_00007917Clytia hemisphaericatranscript
TCONS_00007916TCONS_00007916Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007917-proteinTCONS_00007917-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000080supercontigsc0000080:432745..438179 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
57.63 56.05 17.52 11.81 14.04 11.21 12.41 12.66 11.79 9.71 6.08 5.72 6.28 5.32 9.59 6.1 7.43 4.02 2.09 3.45 4.29 4.09 50.25 47.57 3.43 4.9 7.65 7.8 24.19 26.54