XLOC_004165 (gene) - C. hemisphaerica

Overview
NameXLOC_004165
Unique NameXLOC_004165
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000076:490896..494293-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004165 ID=XLOC_004165|Name=XLOC_004165|organism=Clytia hemisphaerica|type=gene|length=3398bp|location=Sequence derived from alignment at sc0000076:490896..494293- (Clytia hemisphaerica)
AAAGAAGTTCAGACGAGAAAAAGAAAACTCTATAAAGGTAAGACGGTATT
AGAATTCAAGGAGATTGTCTTCTTGATGCTTAAACCTTGATTTATCACAA
TTATCGTATAACTTCGAATAAAAGCCCTTGGGCGTTTGTCAAATTATTTG
AATTTCAGGAGGGGCGCTTATTCGAGGGGGGGGGGTTTAAAAGAAGGAGG
GTGTTTATTCGACATAATACGGTAATATTGATTATTTTTATTGTGTGTTG
TCAGTTTGAGTTATGGAGATGAGGCCTCAGGCTCATGAGGCGAAGGGGTT
GTCGTATTTTCATAATTGTTACTTCTCGCTTTTGCTATTACTTTTCTTCT
TTTTTAATTTTTTTGCATATTTTGTCTTAACTTTCCGTTCTCGTTTTTTT
TAAAGGTATTTACTTCTTGCTTCTGCTATTACATTTCTTTTTTATTACAT
TTTTGTATAATGCGATACTTTCCATTCTCGTTTTTAAGGGATTCCATTTT
CAGGAAAAAACTTTTACAACCAAAATGTCCACGGCATTGACAGAAGGAGC
TAAACTCTTCCAAAAGGAAATTCCATACATTACCGAGCTAGAAGGAGATG
TGGAAGGAATGAAGTTCACCATCAAAGGTGAAGGGACTGGAGATGGAACT
ACTGGATTGATCAAAGCCAAATATATTTGCACCACTGGTGATCTTCCCGT
ACCTTGGGCTACCATCTTGAGTAGCTTATCTTACGGTGTCTTGTAAGTAT
AGCAACAGATATATAGAGCCCGAGCAGCACTGAAAAGTGTGCCGTTATCG
GTAGGAAATCCCATTGAGGTATTACAATAGAATTTCAGTGCGCGACCAAT
AAGAAGCTTCGTGAGTTTTCAAAATAATGGCAACAATATTTTTTGCGATA
TTCAATTTTTTTTGCTTGGAAGAGCTTAAAGTACGCCATCTAGACCTTAG
GGCTTTACAGAAATCTGTGAGTATAGCTCCATGTAATTTGAGACTCCCTA
ATCAAAAGCACAATATTCGAGACGTTTTTAATCATTTTGGTCGAAGTATA
GATTCGCCCGATCAAAATTCGCCAAATCTTTCTGTGAAAATCCATCTGTA
ATATGCCCTTTTCCTGTTGGATAAAACTGCTGATATTTTTCTCATAGCTG
TTTCGCCAAATATCCACGTCACATTGCCGACTTTTTCAAGAGCACACAAC
CTGACGGTTATTCACAAGACAGAATCATTAGTTTTGATGACGATGGTCAA
TATGACGTCAAAGCAAAGATCACTTACGAAGATGGAACACTTTATAACAG
AGTCGTGCTTAAAGGTTTGATTTCCATTTGTCTTAAAAATTATCTACCGT
ATTAGACGTATTCTCGTCATAGTGAAGTATAAAAAAATGCTTTTCTGCCT
AAAAATTCTACATAATTCACCAAAATATCAATAATATGTGCTGATCTTCT
GTGTAGAAACGATTTTCTGTCTCAAACAAAGGACCTTGCTTTGACCACTG
GATAGTGGATAGTCTTAGTGAAGTATATAAAGATACTTTTCTGTCTCAAA
ATTCTATAGATAGTTAACGAAAATTTCAAGAATATGTGCTGGTTTGTTGT
CTAAAATCCATTTTCCGTCTCAGAAGAAAAACCTTGTTTTAACCACTGTC
GATTAGACACTTTTTACCTGCTGGCATACTTTTCTACCTCAAAGTTCTAG
ATAATTCACCAAAATTTCAATAGTATGTGCTGATCTTCTGTGTGAAAACC
ATTTTCTGTCTCAGAAGAAAAACCTTGCTTTGACCACTGGATTCTCGTCT
TAGTGGAGTATATAAAGATACTTTTCTGTCTCAAAATTCTATAGATAGTT
AACGAAAATTTCAAGAATATGTGCTGGTTTGTTGTCTAAAATCCATTTTC
TGTCTCTGAAAAACCTTGCTTTAACCATTGTCAATTAGACACTTATTACC
AGCTGTGATCCTTTTCTTAAAAACGATTCAAATTCATTTTACTGTAAAGG
CACTGGATTCAAATCGAACGGCAACATTTTGGGGATGAGAGTTCTTTACC
ATTCACCACCGCACATCATCTACATCCTTCCTGATCGTAAAAATGGTGGC
ATGAAAATCGAATACAATAAGGTAAGGTCTTGCTCTTATCAATAATGTTT
TTAATTATAGTTTTTAATACTTCTTACCCCCACTGCCCCCATAAGAGGTG
AAAGACTTAATTTCGAAAATTTTGCTTCTTTTTGACTTTTTTACGACCTT
TTGAGGTTTTTTTTCTAGTCAAAATTTTCAACTTTGGTAGAAATTACGAA
TTGACAAAACTTTTATACCCTGTCATACTTTTTTTTGGCGCACCCAGTAG
AATACAAGACGATTTTTAGTGGAAGATCTTATTGTCACATTTTCAAATCA
AGGCTCACCACCAGCCTAAGCCAGCTGCACATTTTTTATAAGAACAATAT
ATATAAGAATATATGACTTTGATAGCCAAAATATCAAGAACAAGTTAAGA
ACATTTCTAAAAGCCTTAGAGGACTTTAAAACATCCGATTTCTTATGAAA
ATAGACAAGAATACTCAAAAACGGTGAATATAAGAACATTTTAATAAAAT
TTTAGATTAAAAACTCCAAATGTTGAGGACATCAGCCGATAACCGAATGT
CGTTCATACCGGGTTCCTTAAGTGACGCAAAAAAATTTCCTTCCCATCCT
CCACTCTGAGCTTCTATTCTTTGACACTTTCTTTGTATTGCTAAGTTTTG
AAAGTTTTTGATGCATTTCCCGAAATATCGAAACTTTTGCCGCTGATGGG
ATTCCAACAGAAAACTTCAAAATTGTTTGATGTCCTTATTTTAAAAACGT
ATAAATAACCTTGTATCTTAATTATTTTTTACACAGGCTTTCGACGTTAT
GGGTGGAGGTCATCAAATGGCACGCCACGCCCAATTCAACAAACCATTAG
GAGCCTGGGAAGAGGATTTCCCAATGTATCATCATCTTTCTGTTTGGACA
TCTTTCGGTAAAGATCCAGATGATGATGAAACTGACCATTTAACCATCGT
TGAAGTCATCAAAGCTATCGATTTGGATACTTACCGTTAAGACTTTAAAA
AATAATACCTGCCCGCGTGTCGAATTCTGAAGACTTTAAGAAAAATGAAA
TAGCAGGTCAAAAATTATTTCATATAAGAATTTTCCATAGATGTTAGGAA
TTAAAACTTGATATTTTGCACTTTTTCATGCTTAAAGATCAGATTATTTA
TATATTTGTTTATTTTTTCAAAACTTTTAAGGAATGGTAGTGAACTTAGT
GGATCAGGAATAGTTTTTACTCATATGAATTATATTAATATCTAAATACT
TAATTTTTCAAAATAGAAATTTATTGTACCGGTGACAAAATATTTACC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007401TCONS_00007401Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007401-proteinTCONS_00007401-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000076supercontigsc0000076:490896..494293 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (0 tpm) - - (324.72 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
188.43	180.59	324.72	319.22	0.36	0.27	0.7	1.52	1.33	0.82	0.85	1.88	0.22	0.87	1.2	0.75	83.18	85.2	0	0.04	287.03	186.37	56.96	61.23	20.02	40.79	2.84	2.37	18.51	23.34