TCONS_00012287 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012287
Unique NameTCONS_00012287
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length795

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012287 ID=TCONS_00012287|Name=TCONS_00012287|organism=Clytia hemisphaerica|type=transcript|length=795bp
ttcagctagaaattagaaataacaataacaaaatatataaaatgaaattg
caatcacttttattggtatTGTGTATCGTGGTATGTGGATCAGATGGTCT
TAACGTCAAAACCAAGAATGACTTTACAGCTACACCGCCCATGGGATGGC
TTCAATGGGAAAGATATCGTTGTATTCTCGATTGTGAAACCTATCCTGAT
GATTGTATAAGAGATTCGTTGTTTATGCGTCAAGGGAAACGTTTACATGA
TGATGGTTATGCAGCAGCCGGATATGTCCATGTCAACATCGATGATTGTT
GGTCAGAAATGGAACGTGATGGAAACGGTACACTTGTTGCTGACAAAAAA
CGGTTCCCGAATGGACTTAAATCTTTAGCTGATTACATGCACAATTTGGG
ATTGAAGTTGGGTATATACACAGACATGGGAACAAAAACATGTGCAGGTT
ACCCAGCCGCCATTTTTCATATGCAGAAAGATACACAGACGTTTGCAGAC
TGGGGAATAGACATGATCAAATTAGATGGTTGTAACTCGTGCACAGACCT
CTTCAAAGCTGGACATGAAGCGTTCAAATTCTACATCAATCAGACGGGCC
GTGAAATTTACTATTCGTGTGAATGGCCCACATACTTGCCAGAAGATAAA
CCAAAGCCATATGCTGACATTGCAAAAGTTTGCGACATGTGGAGGAATTA
CCAAGATGTACAGGATTCGTGGAGTAGTGTGATGAATATTATCAATTACA
ATGGAGATCACCAAGACGAAATGATCCCTTACATCAAACCTGGTG
Run BLAST on NCBI

transcript from alignment at sc0000143:436214..455707+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012287 ID=TCONS_00012287|Name=TCONS_00012287|organism=Clytia hemisphaerica|type=transcript|length=19494bp|location=Sequence derived from alignment at sc0000143:436214..455707+ (Clytia hemisphaerica)
ttcagctagaaattagaaataacaataacaaaatatataaaatgaaattg caatcacttttattggtatTGTGTATCGTGGTATGTGGATCAGATGGTCT TAACGTCAAAACCAAGAATGACTTTACAGCTACACCGCCCAGTGAGTAAT GCTTTCTTCAAAGctagcttttcaaaaaattatactCGACATCTCAGCAA GTAAGTTTGCGTCCGCAGTctagggcgacccgaaggctcccttttctcta gttgtctacccgaaggaaggggagggcgccactctgttctctggattttt tttattcaacatCTCAAAACGCTTTCAAATCTCAGTAACTGATTAGAATC GAGGTTTCATTGGTCGTTAACTTTCCTGTTGACCTTTAGAGTGTGTGGTT TTTTAAATGGCGCGAGGCTTACCGCCACTTCAAaacataccgggtgaccc acgaaaaagttcggacctttctcggcgtcttgagNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcctgttttttacactttc cgaaaagtgaattttgagtttaaaagctcataactagggaacttgtgcgt caaatttaaaaagtaatggctaggattttaagttaggatatctactttct aaatgataaaactccaagcactttgggacatttgttcggcttcaagacgc cgagaaacgtccgaactttttcgtgggtcacccggtatatgcCACAATNT CTCAGTAACTGATTAGAATCGAGGTTTCATTGGTCCTTAACTTTCCTGTT TACCTTTAGGGTGTGTGGTTTTTTAAATGGCGCGAGGCTTACCGCCACTT CAAAACACATATGCCACAAGAATCATTTTATTCGCAGAATAGTTAAAAAA TGTCTTATTAATTTACAGTGGGGTGGCTTCAATGGGAAAGATATCGTTGT ATTCTGGACTGTGAAACCTACCCTGAGGATTGCATAAGGTGAGAATTTTA TCGCAATCATCCTGTAAAATATTTCCGTGACCTTCTCTAGCCACTGGAAA CTAGGTCAAAAATCCTCCCCGATAAGAACTCTGGAATTTTATCCTCATTT GAAAACTATTCTAAACTCTTATACACACTGGGGAAAGGATTATTATACTA CATACGCCAATTTGTGGACCGCAATCACGATTGAAGATATGGGTGCTCCC AAATGTTCAAAAGAGTGCGATGTTAACCACGACGACCTATCGTGGTCACT TGACGTTGTCGTGGTTAAGAAAAAGTCTTTCAAGTTACAACGTCCAAGAC ATCTTAAGCTacatcttttgattgaataaaatatttgttaaGGTTTCTTG CAGGTTTTTATCGAAGTATAAAAAACATCAATCGGATTTTCAAGTATGCG AGGGAACCTATTGCCCCAACCTAAAAGTAACACAGTTGGTGCATGCTTTA ACATTCTTAATCTCATTTCATACCCCTAGAGATTCGTTGTTTATGCGTCA AGGGAAACGTTTACATGATGACGGTTATGCTGCAGCCGGATATGTCCATG TCAACATCGATGTGAGAAAGATTTTCGTCTATTTACAAAGTCATGATTTC AAAATGGGTCCCATAAAATCAATTTCAGCTTctgatattaaaaaaaattc cctgTTGCCTAACCGAATCCCTCAATTTTAGACCTCAAGCCGGGATGCTT GGTTTTTGAAGCGTGGAAATATGATGTTGATGTGTATGTGTTGGTACAAA GTAACAAAAATACAAATCTGAATAAAACTTCTTTCAGAATTTTGTTATAC TTCAGTCTTAATGTTTCCATCTACGACTCTTAACTTTCTGTGATTTTAAG TTCGATTTAACGTTTGATGGTCAGTTCGGAAGTCAAAGGAGGCTTCAGCA TGAAAAGAGTCAaacctctctaattcgaaccttttTGTAACCCGAACTAA AACGTTGGTCCCCACAGCTTCAAAGTCGTATAGGTCTCTCTGTAACTCGA ATCTTTCTCTTATTCGAGGAGAGTTCTTAGTACCTTTAAGATCAAACAAA AGACAGTCAACTGTAGGTCAACATCCTGATTTCGTAGGAATAGCGGAAGA AACATTCTTTCCACCTCAAAGCAAATAAACTTTGTAAACCAcgatttctt tcaattttaggATTGTTGGTCAGAAATGGAGCGTGATGCAAACGGTACAC TTATTGCTGACAAAAAACGTTTCCCGAATGGACTCAAATCTTTGGCTGAT TACGTAAGCTAAATTGGATTTTTCTCTGGGGCTACTTAgtcaatatattg acgaacaatattcaaCATTAAGGTTTGCGGatcgtaatgtacgaagtaaa caacaggTACTCTATATTCTGTCTGTAAACATTCTCCTTATATTGTTCGA ATACTGCAGATTGGTCTGACAATATactgcggacaccttttcaatatatt gctgGTACTCGGCATTTTATATTGTGTATGTAGCGCTTAAGGTCGAATGA CATCAAATTGCTGAACTTTAGCATTATGCGATTGATTAATAAATGCTATA TTGTATGGTTAGCTAACagtatatatatagtctagaagtataaaaccttc aactactcaaaatggaaacaataaatacaaaaacccacaaaacaaaaaga caatacaaatacaacaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNt aagatggaaagagtggggaaagaatgagaatttaaaaaatcggactataa cccggttcgaagccccgtacaccgtgaccgctcaccgcaaGAGCTGGCGA AATCTTGAAatcttatatattttttttcacagaTGCACAATTTGGGATTA AAGCTCGGTATATACACAGGTATGATAAACACCTCTGTATCTTATTCATT CATCTAATTGTTCCATTCCTTTTTcctcttttcttttaaaattcttcCAT TCTACAAAGAATTTGTTTTTAACTCAGACCGAGGTATCAAAAATTTAATG TTACTCTCTAAAAATTCTAATATCAttgaaaatcgatttttattttaaac agtatctcagctgacacacaaacgtcgtttcaacgttcatctaatgttca caacgtccatttaacgttagatgaacgttgaaacgacgtttgTGTCTGCT GGGATAGTTGttaagatgttttttttcgcCTCTGTTTTACATTTGGGTTG TTATTTCTCGCCAAGATTTCTTACAAAACTTTGGTTTCGTATTCTTTCTA GACATGGGAATAAAAACATGTGCAGGTTATCCAGCCGCCATTTTTCATAT GCAGAAAGATACACAGGTAATTACatgttttcttataagcatacacaAAT TTAAAAGCAGGCTCGGAGCTTAGGTCGAAGTCTTGAAAATGCTTATAAGG ATGCTTATATCCCAAGTAAGATTTTAgagaaattccgaaattccgttcaa tcccagccaaaatcaggaaactACATTTTTCGTTGGCTCAAGGTTATACT TATCACATGCTTGATTTTTTAAGTCAGATTTGCAAATAAAGAGGAAGACA TGTATCAAACTTATCGTTTATTTAAAAACGTGAATATGTAGAGATCAACA CATAATCTTTCTTTCAAGAAGCTTTCTGTGCCTCTGAAGCATTTCTACGA TGAAACAATTCTGAACATTTGAAATTATGAGAGTCTTTTCAACTTCAGAT AAGGGTTCAGTTTCATTTGTCCATATCGGGACTCTAAATGCAATAAATTG AATAAAGCAAACTGATCTtttcatttaaaggttttatttttacataagtg tttccgttttatatcagacacatatttcatatcaggacagtgtcttgcta ttgttatattatgctgatatttaagcaaaaatgtttttcttctcttcttt ctgaccaatcttgctccacatccgtgtcaatccaatgtgtaaaagcttgt aaattaaaattgatgagtaagcaaacgatatcactcttattaaaaACGAA ATCTGtaaattgtttcatttttcttcccAGACGTTTGCAGACTGGGGAAT AGACATGATCAAATTAGATGGTTGTAACTCGTGCACAGACCTCTTCAAAG CTGGACATGAAGCGTTCAAATTCTACATCAATCAGACGGGCCGTGAAATG CTTTACTCGTGCGAATGGCCTTCATACTTGCCCGAAAGTAAACCAAAAGT ATTCATGTTTTATACgtctgtttattttttatttttgatttttcactgCC TTATCGTGGaaaacttctttaaaaaaagttcggggaaaagtgacgaatat tttccccgacgaaaatttccccggccttaatgcgtttaccaactaccagc aagtgacgaatttttccccgacgaaaattttccccgataaggtataagaT TTCGAGCTTCCAAAAATTGACCTCCACAACAGCCGTTAGATGAAACTTTA AGTACACTcgtttttttacaagcataCTGGAAAATCGAGTCCAAGctcaa tatgcttagcaaaatctaattttcagccttaattaatgcttatttatatg cttagatttcgatttgttgattttctttgggttcaAGAAAATTTTGTATA TTCAAGTCGGATCATTGATTCGGCTCAAAGAattaaagttttctttgaaa tttggcgCCGCAGGTGAAAATCTTTGATCCAAGAAAgctcaaacagcttt aaaagcaaccctaaaaaggtcagcTTTCTAAAAAAGCTGcacaatttttt tgcatttcagcttaGAGGTCTGTTTAGCATTATACTTATTTTTTGCCGAA TCtgagcctaagtatgcttataaacgttatgcttataacaAAATAAGAGT GCATCTAAAATCGAGTTTACTGTAGAGAGTcttatctattttctttgata atTTGTAGCCTTACGAAGACATTGCAAAGGTGTGCAATACTTGGAGAAAC GGTGCTGATGTTCAGGtatctaaaatttattttactttctttcttctttA AGTAAGGATAATCTCACTGGTCCAAGTTTGTTTTGGCATATAATCTTTCC AGTCTGAAATCTGTTTGCTACGGAAACGAAAACCAGTTATTCCTTAACCT AACCTTGCGAAAGCGAGTAGGGCTCCTCTGGATTCTAAGATCAGAGTGTT AATCGTACATGTTGGTAGTATTACCTCAATTTGACTAGTTTTGGGTATTT CATTTGGCAAACACAGAAGACCAAATAACCGAATATGAAAGAAGCTTTAg cgttttttaaagttttttgggttaatttttagaaaataatttatataaaa agtgGTAGAAAGTAATATAAAAATATCCagggtgaaaaattatttacaaa tgTATACATATAACTTGGGAGATGACGTCGCTACCAGAGCGAATCATCGT TGGTGACAATACTGCAGACCTTGACGAGAAGAAACCATATTCCAATACAA AAGGTGACGAGTGAAGTGTCGTATGCGCCCCATGGTCTTTCGTTATCATG TTGGTCGAAAAGAGCGTCAGACGTTGTCACGATGTTTTTAGATGCTTTAG ATTGACCTTTTCGGCGAACAGTACTATAAAATCAGTGGTAATGATGTTta aaagaaagaagtttttaGCAATCGACTTGttgtaaaataattaaattGGC AAAGGCTATTACTATTAATTAAAGATGTGTAGAAGCAGAGAGAAAACAAG TAAACTCGAGTAATCCAAGTTCCTACCTATTGTATTGATTAGCTTAGata ccttttttgaagtttattgattttctgGATCTTGCCAATGTCAAGATCTG ATTTCTTTGGTCGATCTAGGTTCAGATTGTTACCCTTTGCTTCTTGTGGC TTTGGAAGCTCTTTATCAGATTGTACATCAACAGTATTTGCTTCGATGTC GTTGGAAGCagcttttttagattttctctTGCGTTTCCTTTGCTTTTGCT TGTCTATTGCCTCGCTATCTTGGATACTTTGCATTTGAGCAATTTTATCT TCACAATCTTTCTTGATCGTTTGCAAGTGTTCTTTGGTTGCCTCGAGCTT TTTGTTAGTCTCAATTTTCTTCATGTTATTCGTGTGAGCCTGAAAAGAAG TATTTGAAATAGAATTTTAATAACGGTGGTATAGTCGACACCTTCATAGC CCTTTCCGAAGACCTTTACAGCTTCCCCTTATGAAATGTTCAACAAAAAT ACTCGTGACCTAAAAATATTACCAATGATTATTTGCTCAACAAATATTTT CTCAGGGACTTGTACAACCTAGCTATTCAGTtcctaaatatctttattgg tacTGATCGATGGtaatttattgaaataaaaagcTGATCTTACCTCGTCC CTGTAAGCATTACGCTCACGGATCAAAGATTCGATCCTCTTCTTTTCACG TTTCAAATCGTTTTGCATTTTCTCCATCGAGACCTTTTGTTTTTCGATAG TAGCTTTGTTAGCATTTACTTTCTTCTTGTGTGCAGAAATATCTTCCAAA CGAGCACGAATTTCGACTTCGCGTTGGTTAAGTCTTTTTTCCAAACGGAG AACACTTTTCGATGCAGTCTCTAGTTTCTTTTCACAGAtcgctttttctt tttgtaagaaaGCAATCGTCAATTCAGATTCTTCCAGGTTGCCATCTTTT GCAGCAATCGCCTCTTGATGCATAGAATCTATCTGGTTGGCTTCTTTTTC TAACTGTTCAAGCTGTTCCGTAGCTTCAACAATCTCGTCCTTGTGAGCGT TTTTCAGACTGAGCAAAGCCTCATTCTGTTTGGCTATCTCTGATGCATGC ATTAATTCAGAGTCAACTTGTGCTAATCTCAATCCTTCGTTCTGTGTTTT TAGCAATCCCATATTTTGTTCCTTGATGTTGATTTGCTCTTTGAAGCTGT CGCACATCTTAACCAACTCGCTCTCTTTTTGCGTCAGTTCTTCAATACGT TTTTTACGCTCTTCTTCATTATCCTTCATCAATTTCTCATTAATCGCCTT TAGATCATTCAGCTCCTGTTTTTGTTTGTTAAGCGCTTCTTGGCCCTGGA CGACCTTATCTTTAGCTTCCTTGATCTCTTTGGTAGCCTTAAACAATTTC TTCTTGATGACAGCTTTCTTGTCATTCAATTCTGTGATTTGAGAAACCTG GGCATTGACTAGCTCAGTTTGTTGCTGTACGGAGTGCTGCGTATCAAGCA GTAATTTTTCTTCAGCTTCCAAGCTTTTACGAAGCTCTCGGATCGTTTCT TGGTCAAGCTCCGATTTCtctttttcaatagaaatcattctttctaaatc tttggcTCCTTGGTCTTTTACGGTATTCAGCTCCTGCtcgaaatgttttt ttatttcacagaTTTGAGCAtctttttcacaaatttctGTCTCCTTTTTG GCTATAAGGACTTGGTTATGTTCTTTTTCTTCGTTCAACAACGTGTCAAA GTGTTGTCTCAACTGAGAGGTAGTATCGGCAACACATTCTTTGATATCTA TGCTCATATCTTCAACCTCATCACGGGCCATTATCAATTTGTTATTTAAA TTTTCGATCGTGTTACGCAAAGCATTCGCCTCTTCACGATGCGCCTGATC GGATTCTTCCTTAATCGAAGATAATCGCCGAATCTCAGTCTCAGCTGCTG TGTTTCTACCGACAATGTTGTCGTATTCACCTTTCATTTTACTGTAATCA CCTTTAACTGTAAAAAGTTCTTCCAAAAAAGCTGTACAATTTGTTTGAGA AGTATCTTCGCTTCTCTTTATTTTTGTACTGGCTTCACCATCTCTTGAAG GAGTGTTTTTGCTNATTTGTTTGAGAAGTATCTTCGCttctctttatttt tttattggctTTACCATCTCTTGAAGGAGTGTTTTTACCCTCTTCTCCTC CTACATATACACCTTCGTGTGTCTTTTCCTCATTCTGGACTTTGACGACA TTTTGATAAGTTTTCATCGCAATGCCGAATTCCAGTGGGCCAACGCTCAA CTCCTTCATAATCTAAAAACAATGTGAAAGACATTTGAAGTCTAAATTTG TGGATATGAATGAACCagtaggtaaaaggattgaacTCAAAATTTACTAA AGCTGAGGCCACGCCCTTCTTGTTTGTGTCAGGGGTAACAAGATACATCA ATCTTAGCAAGAAGTACTTTGAAAGTTACATTCAAGCCGATAATCAGTCT TTATAAAAAGGGTATATTGCAAAGCATACATGTCCGGAACTTAACGGTGG TTTCACAAGAAGAACTGTTGACTCTCTTTTTAAAGCCGAAAAGTTATGCC AAACTTACTGCGCCCTAGGTAACTGGAAAATTCTTTTGAGTCGGGGATGG GTTGCTGGCAGGTGACTGTTGAGTAGGGCAGTCGGAATcactacatagaa atggcaactattgccttaacgggaaatatttcccgaacgggaaggaaggt gaaaaacttcccgaaatggaTAGTTTCCGAATCAGGAACTTAAccagttt cccgatcgggaatgtGACCTCTGCGCACTCCGGAAATGGTCGTGGAAGGT AAATAACTGATGCCTATTTTAAAAGAGGGTAAATAAATACCTTTCACCgg gtagttaagaaatccatcgggtaatcgcttcttaattctatccccattcc caattaaaaacttccctaTTTCAAAActtcttctcgatcgggaaacaaaa atctgctttgtttacaaaaattcaacttcccgttcgggaacaatgaaaag ttcttgaccaaaacgggaaacagaaaagtgatgaaatttttaaTCTGTAA ACAGTTTCCTTTTTGGGTTATTTCCACCTTCctgttcgggaaatatttcc cgttaaggcaatagttgccatttctatgtagtgATTCCGACTGTAGGGGT GGAAGATATAATATGTAACCAGAGCTTTTAGATTTGAAGAATAAAGCTAG AcatagccgtcacccggcgtcgcacccgtcGATCGAACGGGTTAAGCTGA ACATATCATAAGTCCTTTGGACGGTGGGGAGGGTAATAGGATATGATGCC CAAAGAACAAAATTTCCGAGTTGAAAATTGTAATCATAGACTATTATGAA CAAACCTTTCTTTGTAGAAATTCTTTATCATCGGTAACGATGCATGGCTG TTTGTTTCGGCCACCGTAAAGTTTGTCAGGAAGAGAAACATCCTTGTAAC TTATTAATATTCTTTTGATCTGACACAACTCGTCAGCTTCTGGTGTATTT CCACGGCCTGattgaaaactttgaatttgatttccGCCACGATAAAAGCC TTTTGGAAGTCTTGCTTTCGAAGATTTCTTAAGGTCTTCTGTCATCAATG ATGTAGCGCGCCACCacatctttcaaaatattttcgtcGTTAAATATTTT TCACGTCTATCCAATTCACAATGGAATTTTTAAATGAACTTTTTATTTCG GTGCATGTTTAGAATgtctatttgtaaaattatatttgacgtcaaaaaat tagaCGTCAATTAACGTCATAACGACTGCTTTTCTTATTCGACATTCTTG ATGGCgaattggcggccgcccacgctcaTTAAGATTTCATTTTGAGTGCA TATTTCGGCCATCTTTAACTTTTCCGGctatcttaaatattttcataatt ccCCCATTtggcaaaatatgaaaatgcttaCTAAGGTACTGAGTAAATTC ATCCATCGATTAATCGATCCATCCTCTTTTTACCAAGGATTCATGGAGTA GTGTGATGAACATTATCAATTACAATGGAGATCACCAAGATGAAATGATC CCTTACATCAAACCTGGCTCTTTCCTTGATCCAGATATGGTAAACAATTT TAACTTTGACTTTAAGCGGTATTGGaattaagaccatgttcagacttTAC AGTTTCGTATTTCTCTGGAATGATTTTCCGTTACGGATACGAAGTGTTCA AACTTGTTTTGGAACTGTTTCGTTTCGTAACGATGCGGAAGGGAACCATT TCATTTCGTAAAGATACGGAACCGCAACGTCTGAACATGAAAGAGTAAGA AAATattcgtgattttttttcttcacaatCCTAGGTTAAGGATTAGTTGA TCTCCTTGTTTTTCTACCTTTATAAGATGAGAATTTCTAAATGCTCCAAA ATTCGAGTAGTGGCCacaaataataatgataattcAGTAGCTTTGACTTT AGTTTAGTTTAGTGTTTTTTCTGGATTGATATTTTCATAGTTATAAGATT GTATTATTTTAGGTATGTAAAAAAGTTCTCTTTTCAGCTTTTAATTGGTG ACTACAGCTTGAGTGAAGACCAATCGAAAACACAATTTGCGATCTGGTCT ATAATGGCTGCTGTGAGTCTAATTTTAATGCATTTCAGATTGATGTATTT GTAACTCCCGGTCATGTATTTGCGTTTTTTgcgtttacacgttttttttt ttataaaaacgtcaaaaattttcgaagccttcagatgttcttattttttt ggatttgaagtctaaaaatgttcttattttcagcattttctgagaatttt gatgtaatttcttaagaaaatgcatgtttttaagtctccaaagccttaga atgttcttagaatgttcttaaatttttgggcctcgaagccttatgttctt atatagtttgttcttataaaaaaccacCCCTAcggattcattcctctttg tttatcacgggaattaactacatgcggtttaaaagaacgacaaattatgC ATGCATGttattaatgcaggaattgCAAGACGAACCTACTGCTAAACTAA ACCTACCTAAAGTTAAACTCCCTTTTTTTAGCCATTGATGATATCAGCAA ATTTGGAGACAATGAAAGATTGGcaaaaagctattttattgaacgAGTAA GAAGAATTACTACATAtttctttcaatcatttttCTTATTGAGCTTGTTA TGCGCAGTTTTATAATTTTTGCGCATAccagttttgtaatttctgcgcaa atttgtaatttttttcgcggacctttgtaatttttgcgcacCTTAAGTAT CCTTAACAAAGGTCAATCACAAAGAAGACGACtccggaaaaaaaataaat aaaaaatgtactATTCTTTTTCTGAAATTGCAAAAGTGCGCAAAGGTCCA ATTACAAAatgcgcagctcgaaattaaaaaactgcgcagaaaatttacaa aactgCGCATAACAGGGCTGTTTCATTTAAAATCCGTacaggggtggacg aaccttttcaaaaaaaaaaaatttttgaaaatgtgtggatgccctcttga aaatggcaaaatttacaacaaaaaaAAGCATGGAAAATTCTTCTTCATAG CTTAAAAGTGAGAGTAGAAGTAACTAAAACAAAGTCTTTTACCGCCTGGA AGTTAAAGAATAAccttttaccccctgaaaacaAATACTTTCCTTAGACA CCTTGGAAATTCTTCTTCGGATTAATACCTCCTGGAAAAGTATGGATAGA AAAAATGGGATTCCCACAATATCACCTTTCAAAGTTTGACCTTTGTAGAT GTATTAGATTTAGATTCTATTTGAGTTTTAGAAGTAAGTTTACAGAAGGC TAGTGGATTCGATCATTCGTAAATCTGATCCAGCTCATCTCACCAAAAGA AATTCTGACACCCTCTGTACTTCGAAGTATTTGCGAATTCACTTTTGACT TCGATTTATCAAGAGTCAAATGTGTCCCAATGGATATGCTGTTGCTTAGG ATCACACACTGTAACTGAGAAGTACAATCATGGACATCATTTGGACAAAA TAGTTGAGACAAAGATGATTTCCCTGTGAAATTTTAAGCACCACGAATta tttttaagcgcgttaaactacagtgggaaaatagagttttaacatgagac ttaagacttagaccTTAGGATCCgaggatccaaaagctcaaggatggtcc aataaggcttgaaatatagcctagaaaacCACCGAActcctctaaaatcg aaatattcgatgaaagaaagtggaagtgctaaaataaaaattctcgGCGC CCGAagttaaattctgaaaaacgttaaataCACcgaaatctcaatatatt tcgaccatgattgtactttCAGCGCTCGAGTAAAAATAGGTAGATGCATG AGAATAGGTTCCTTTGAAAACTCATACTCACGCAGAATTCCTCCCCTCAC ACAGACCTACTTTCACATCAGTGCTGTAGAACTTGAGTAGTTTATCTCAC AATTAACTATTTGTAAAATGTTGGTATCTTATTCTTCAGGGAGATCATTG CAGTAGATCAAGATTCTCTTGGCAAGATGGGAAGACGAGTTTACAAAGAT AATAACCAACAAACATGGACCAAACCTTTAGCTGATGGTGGAATGGCTGT GGCTATCGTGAGCACACGTGAAGATATTCCTGTTTTTATGAGCGTCGATT TCAAACTggtaaaatattctttttattaCGCTTCGGTTTCATGGGCATAC CAGGCTCCAGGTGTGTTAGGTGGGGCACCACTCTTTTTTTCCCTGGATTG CTCTACTTAATaatgatccttctcttaattgctgagcatcaagcagaggg ACATGATatacagtagcgtagacaggagggatGCAAAATtcgtgtaggag agcagatgaCACTGTTACTATCTGttcataatataaaaacatgattactg tgtcataaaaatctgctctcctacacaaattttacgcccccttgtctacg ctactgagaTATACCATTTGTACTAAGTACCAACCTTGAATACGTATTGT GAGAGTTTAAACGTTTCCATTCGACTATTATTGCTTGCTTCATTTTCATT CCAGCTGAACATTACTGGATCATGGAATGTACGTGATTTGTATGCTTTGA AAGACCTTGGCTCTTACGAAGGAAGTTTCAAAGCCATGGTCAATCCTTCT GGTGTGGTCATGGTCAAACTGACGAAAGCTTCGCGTGTCATTTATGCTGA TtttatttagtaaaaaaaagAACCATTCAATGATCTGGTTTCTctattta ggaatttttttattgaacagAAAGTTTTGAGATAATTgtgttttttattc agttttttagagattttttttgttttttatttgaaatagtTTTGTATATA GATTGTCTTAAATTTAGTAaataggattttttaagcataaCGCATGCAGT TTGTGTTCCTACATAATCCATAATTTGATTCAAAATGGCGATAAAAGAGG AAAGACGAAGCGGGTGAAAACCAGTATGTAacatttaatatattttttcg ttttagtAGAATATTAGGAAAACAAAAANAAAGACGAAGCTGGTGAACCA GTATGTAACATTTAATATATATTTTCGTTTTAGTAGAATagtagaaaaac aaaaatgaaaaaactgacATCAGTTTTGGTATTCTGTATCCTGGTTGGGT GTGGCATCAATGGTCTTAACATCAAGAACAAGAAAGATTTTCGAGCTACA CCGCCAAGTACGTAAaacttaactttttgatttgatgTAGGTacatctat caaccttttattAACTTCGGCTTTTTAGTGTTTTGGTTATTGGTTTTGGT TACAAGTTCACTTTAAACGTTCACGACACCAAGGactaaaatgacgtcaa tttttgacgaagaccctgcaatgttattttttgtaagagcaacggaactc tagtttttttttttaattattttcaactgaggattgtttgtaaaaacatg aaactgccagtattgaaaaaataattttcattactttaacTACGATAGTG TTTTGGTTATAAATTTTCaaggaaatgacgtcaaaattctttgttttatg AGAATGCCAATGCAACGCCTTCCTCCTGATTCTTCCTTGTAAACTCGAGC CCAGCCTCCCCACGTTTTAAAGGTTGATAATAGTAtcttcatgatatgca ccattgcaatgtcttccacggacccaacagctgattggttgactGATTGa ctgacgtattgactgattttacgtcacttacaaccaatcagagtccgtga tgtaatgtcaaaagacattgcaatggtgcatattatgTATTGGAAAGGAA GAGTTTTTGACTCTTTTACTCTCTCGTATTTACAGTCCTTATCAGTCCcg gtcccggggggggggggactagggcaagatgggttacggggatgctccgc tggtcagggtaccttttctaacctccacgagtcccaggtagggtcgcaaa aacaccaaaatagaaaaatcagtccctcttAGGgtgctttttttggaaaa tttgggaaaaaagtagacaattttggaatttcagtcccattcagggtcac ttttttcgctaatttcgagtcccacgtagggtccatttttcgaacctcag cggagcacccccgtcggtcgaCAAGGGTagtcccccccccccccggggtc cCGGCctagtttttcttttgttcgGTCACTACGAAATTTGTTCATCATTA AATTATTATCTTAAATTTACAGTGGGATGGCTTCAATGGGAAAGATATCG TTGTATTCTCGATTGTGAAACCTATCCTGATGATTGTATAAGGTGAGAAT TCGCTTGAGTATTCTTCCTCTATCAGCCTATTCAATATTTAATCCGTAAA ATCGCACTTAAAAAAACACTACTcctgaaaatgactaaaaactgaaaaga atccaaaatttaaaatcactTTTTCATTAGTTCACAAGGTATTATAGTAG GGGTGATCCATTTTTACCTGTTTTGGGGGTTAGGAGTTTTACCTGTAACG TCAGTTGTTttaccataaaaacttttgccaggCGTAATTCGCCGtccccc tctcaaaaaagtatcaaaatccTATTTACTTTTGAACCAATTACATGTGG TTGCCATGAAAGATGCTACAGATCCTAAGGGTTAGTCGTCGCTCACAAAA AGTTGGTTCTCTAAGAAGTTCGAGAGAACAATCCCTTGCATCTTGTTTTA CTTTGTACAATAACCATTAACGAAACGTTCTCATATTTCTAGAGATTCGT TGTTTATGCGTCAAGGGAAACGTTTACATGATGATGGTTATGCAGCAGCC GGATATGTCCATGTCAACATCGATgtgagaaagattttttctgcgaaata tttcttttactATATCTTATTTATTGCAACCATGGGATTTATAACATAAT ACCCAGTGGCTTTTATGATGATTCCCCGTCGGCACCTTTTGAACTCATAC AATTCACCTTGCACAATCTCACAATCTACTGATATTGGTGATTAAATTTG AGTCAAACTTTCCAACTCTCAATGATAGAGGAGCTtacctttcaaacttt ttatctAATTGGTGAAAGAAGGGGAGAATCTATAAAATACTCATTTATTT TGTTCAGCAAAGAAGATGATAACTAATTAAAAAAGGACTTTCATTCAAAA TGTGCTAGAAAGTTCAAATGGAATCAACTTTGTAAACAACGATTTCTTTC TTCATTTAGGATTGTTGGTCAGAAATGGAACGTGATGGAAACGGTACACT TGTTGCTGACAAAAAACGGTTCCCGAATGGACTTAAATCTTTAGCTGATT ACGTAAGCTGGCTTCAATTTAATATTTACCTCTAGATACAATGAAGTTTA TCCTGACTAGTCTCTAAAAACATATTAGATGTAGTAGATGAGCTAAGGCA TGGAAATATCTCTATCTGTCTGTCAGTTGCAGAAACATTGTAGCAAATGG TTGGATGTTGCCTGACAATTTGCATACTTATATTTTAATGGAAAATGTTT CTTGGGAATTCTCCTTGTTATTAAGTTATTCCCTTGGTGAAAAATGGagt ttttttccgattttcgaaaaactccTGTGTGACGTTCGACTATTTTGCTT ACTATTCTGCTTTACAgaagattgttcttaatttgttctcgGGTTGGGAC CTAAATTGAGCCCCGGGTTTTAAAGTATATAAACTATCTTTCTCACATCA TTTTAGATGCACAATTTGGGATTGAAGTTGGGTATATACACAGGTAAATG GATGAATCCGTCAATATTCACATTTTGCCGATAGTTAATGGCTTTCGAAA TAATAAAACTGTGCTATATCTAAACGACACAGTAATAACTATAACAGAAG ATACTATAACTTtattaatcgcacgatgggttattttttcttatttggca cgccctcaaagagagcaattaatcgttaatcacactctccaatgctgcgc caatgtttacaaaattgattttaatgttttttcttacattttttttttgc atcgaacgttttaattgcattcaaaattcattttgtgagaaagaaaatct ataaacaacaataaaagaaagacatagagagaagagaaaaatataaaact ctcagtgtaatttctttaatttactttcctaactgggaaaaattAGTgac agccattgtgcgattagctcgtaaccacataataactcgtacaattcgaa aattgcactcgtgatttttttgtttcgagtttaataacaaaaaaatcact cgtgcaattatattcgaattgcactcgatatcatgtgattacatatactt atTTCATTTATAGACATGGGAACAAAAACATGTGCAGGTTACCCAGCCGC CATTTTTCATATGCAGAAAGATACACAGGTATAGACTCAtaattaatttg tttttcttgaaattttaattGTTGCTAGATAGTGTACTCTATTCAAAACA TTTcaatcttcataactcgaacatttCTGATCCTTGCAAATACAGAGGGG CTGTATCCGAGATATAAGAGAGTCGAAGCTTCTGATCTCCTTACATTTAG CATGACTAGCGAAACAAAAATGCGAATCTTCATTGGTCAACGTTGCACCA TGCCTTATTATTGAGTTAATACATTTGCAATTCATTCGGAATAACCcgcc gtttttatcttaaacttgTGGAAACTAAAAGTGTTGATTCACCTTCGTCC TCAGTCATTCAGGATCtacaatcagtcagaaaaatattgacaggagAGGC TTTAAAATGACTCCCCTTCCCCCTGGTATAAATGTTGGGTAGTTGGAAGT GTCTGTTGCATAACTCGTCTGTTGGGTCGCTCAAAAACATTGATATGAGG GGGAAGGGGAGTGAACTAGATTTCTACTCTACTGCCAACATATTAACTGA CTGATTGTAGATGAATCAGATGCTAACTGTCCCCGTCGCAGGAAAACCAA GCtacataaactcgcttttgaAGTATAGTacgcaatattttcacatttta aTTATGAAGTCTTTCTATTCAATTTTCCTTTCTATCCACCCAGACGTTTG CAGACTGGGGAATAGACATGATCAAATTAGATGGTTGTAACTCGTGCACA GACCTCTTCAAAGCTGGACATGAAGCGTTCAAATTCTACATCAATCAGAC GGGCCGTGAAATTTACTATTCGTGTGAATGGCCCACATACTTGCCAGAAG ATAAACCAAAGGTAAATGTTAAAGATTAACACGTTCGCTGCCAACTACGT GTAGtatggggggggggcgtacggcgTTTGCGATTTTCGAAATACCGAAT AACTTTactaaaatttccgaaatttcgTAAAAGAATACTTGCAATTTCGA TACCGAtttttttggggtatttttcttcgttttgactaacttttcatcaa atttgatttttcatgtatgaattcctaaaaaaggggataaaaaactttat aatgCCGAAATgccgaagcaaaaattcatatATTTCCGATTCCGAAACAA TTttagaattccgaaataccgaaggaattttgcctgatttccgaaattcc gaagaaaaaggGTCGATCTCCGCAATTCCAaaaaaccgtacgccccccat aCGTAGAAGGGGGCGGGAGGTCAAAATATCTGTggtattttttaaatcta tgtAAAATTCTGCGTCGTTTGGTATACAATGTACAGGCATTGGAAAATTC AGGTCACAGGAACctttgaaagtcaattttcgaaACTATAGTTCTCTTCT GTATAAGTGTGCAACTCTTGTTTATCGACACTCTGCGTACATTTCTGGTT TGACCGATTATTCTTtcttcatgatatgcaccattgcaatgtcttccacg gagcCAACAAcagattggttgaaagtgacgtattgattgatttgatgtca cttacaaccaattaGCTATTAAGtctatgatgtaatgtcagaagacattg caatggtgcatatcatgaattctttaTGAATATGAATAAAAACCCTTTCG GTGCACAAGCAGAGAGTTCGCGCATTCTCAAACCGAGTCAGACCGAGGTT AAGATTTGAATAAATTTGAGTATTAGGTCTGGTACAGATAGAACCTATAA AAATTTCCAAGAGATTTTGACAAATTCTTAACATTGCCTTGTCTCGACCA AATACCGCTGTTGCTTATCAAGTTtatattgttatcatcaaaacaaaatt ttaacctATGCTTATCGTATCGACTTTTTTAGCCATATGCTGACATTGCA AAAGTTTGCGACATGTGGAGGAATTACCAAGATGTACAGGTAATTAAAAT TATCgatttcaaattcaattgaCTCTCACCTGAATCTTTTCAATGCTACA GAAAAGGTTCAAGGATGCTCTCTCGAGTGCTTCAATGTAGTGATAAGGTC TAAATAGTGTGATAAGTCGAGGTGTGAGGGAGAATCACAATCAGCGGGAG GGATGTGCTTTTTAGGAACCTGGGGAGTAAACCCACTCCTTtggtatttt cttattttcttaatttcttcCTCACAAGTGTAAACACCTAGTTAATCCTT CCAAATCATTTTAGTGATTCAAAGAAAGGGATCGATTTCATTCTGAATTA TATTCCTTACATTCAAAGAAATTAAGTTACACAACATATTCACAGGCGAA ATGGATCAATGGAATCAGGACCGATTGCGCCTCGACAACGGCTTcccgtt ggttagacgcaaaaacATCGAAAAACTTAGACCAACAGAACGTTGTTATC GGTGGGTGgttctgattacccatgattcatttcgaccgtgaaatgCACCT CATTGCTCAACTACGACGCTTTTTAAAATGATAGTTCATTTTTCCCTGTT TCTCATTACCAGGATTCGTGGAGTAGTGTGATGAATATTATCAATTACAA TGGAGATCACCAAGACGAAATGATCCCTTACATCAAACCTGGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006912XLOC_006912Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012287-exon-sc0000143-1491911889:436214..436354TCONS_00012287-exon-sc0000143-1491911889:436214..436354Clytia hemisphaericaexon
TCONS_00012287-exon-sc0000143-1510915933:436214..436354TCONS_00012287-exon-sc0000143-1510915933:436214..436354Clytia hemisphaericaexon
TCONS_00012287-exon-sc0000143-1575043694:436214..436354TCONS_00012287-exon-sc0000143-1575043694:436214..436354Clytia hemisphaericaexon
TCONS_00012287-exon-sc0000143-1491911889:450986..451055TCONS_00012287-exon-sc0000143-1491911889:450986..451055Clytia hemisphaericaexon
TCONS_00012287-exon-sc0000143-1510915933:450986..451055TCONS_00012287-exon-sc0000143-1510915933:450986..451055Clytia hemisphaericaexon
TCONS_00012287-exon-sc0000143-1575043694:450986..451055TCONS_00012287-exon-sc0000143-1575043694:450986..451055Clytia hemisphaericaexon
TCONS_00012287-exon-sc0000143-1491911889:451506..451587TCONS_00012287-exon-sc0000143-1491911889:451506..451587Clytia hemisphaericaexon
TCONS_00012287-exon-sc0000143-1510915933:451506..451587TCONS_00012287-exon-sc0000143-1510915933:451506..451587Clytia hemisphaericaexon
TCONS_00012287-exon-sc0000143-1575043694:451506..451587TCONS_00012287-exon-sc0000143-1575043694:451506..451587Clytia hemisphaericaexon
TCONS_00012287-exon-sc0000143-1491911889:451973..452065TCONS_00012287-exon-sc0000143-1491911889:451973..452065Clytia hemisphaericaexon
TCONS_00012287-exon-sc0000143-1510915933:451973..452065TCONS_00012287-exon-sc0000143-1510915933:451973..452065Clytia hemisphaericaexon
TCONS_00012287-exon-sc0000143-1575043694:451973..452065TCONS_00012287-exon-sc0000143-1575043694:451973..452065Clytia hemisphaericaexon
TCONS_00012287-exon-sc0000143-1491911889:452470..452506TCONS_00012287-exon-sc0000143-1491911889:452470..452506Clytia hemisphaericaexon
TCONS_00012287-exon-sc0000143-1510915933:452470..452506TCONS_00012287-exon-sc0000143-1510915933:452470..452506Clytia hemisphaericaexon
TCONS_00012287-exon-sc0000143-1575043694:452470..452506TCONS_00012287-exon-sc0000143-1575043694:452470..452506Clytia hemisphaericaexon
TCONS_00012287-exon-sc0000143-1491911889:453077..453141TCONS_00012287-exon-sc0000143-1491911889:453077..453141Clytia hemisphaericaexon
TCONS_00012287-exon-sc0000143-1510915933:453077..453141TCONS_00012287-exon-sc0000143-1510915933:453077..453141Clytia hemisphaericaexon
TCONS_00012287-exon-sc0000143-1575043694:453077..453141TCONS_00012287-exon-sc0000143-1575043694:453077..453141Clytia hemisphaericaexon
TCONS_00012287-exon-sc0000143-1491911889:453807..453974TCONS_00012287-exon-sc0000143-1491911889:453807..453974Clytia hemisphaericaexon
TCONS_00012287-exon-sc0000143-1510915933:453807..453974TCONS_00012287-exon-sc0000143-1510915933:453807..453974Clytia hemisphaericaexon
TCONS_00012287-exon-sc0000143-1575043694:453807..453974TCONS_00012287-exon-sc0000143-1575043694:453807..453974Clytia hemisphaericaexon
TCONS_00012287-exon-sc0000143-1491911889:454996..455052TCONS_00012287-exon-sc0000143-1491911889:454996..455052Clytia hemisphaericaexon
TCONS_00012287-exon-sc0000143-1510915933:454996..455052TCONS_00012287-exon-sc0000143-1510915933:454996..455052Clytia hemisphaericaexon
TCONS_00012287-exon-sc0000143-1575043694:454996..455052TCONS_00012287-exon-sc0000143-1575043694:454996..455052Clytia hemisphaericaexon
TCONS_00012287-exon-sc0000143-1491911889:455626..455707TCONS_00012287-exon-sc0000143-1491911889:455626..455707Clytia hemisphaericaexon
TCONS_00012287-exon-sc0000143-1510915933:455626..455707TCONS_00012287-exon-sc0000143-1510915933:455626..455707Clytia hemisphaericaexon
TCONS_00012287-exon-sc0000143-1575043694:455626..455707TCONS_00012287-exon-sc0000143-1575043694:455626..455707Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000143supercontigsc0000143:436214..455707 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
23.5585 21.3066 12.534 8.32845 4.67151 3.01038 11.7071 16.6909 19.9543 16.6718 22.7913 18.4919 17.4055 15.2946 34.0266 45.5176 17.6199 20.3567 19.5268 20.9226 10.5356 9.20983 15.8079 15.8805 15.7965 14.6967 11.5875 10.7178 31.5631 22.2659
Blast
BLAST of TCONS_00012287 vs. Swiss-Prot (Human)
Match: NAGAB (Alpha-N-acetylgalactosaminidase OS=Homo sapiens GN=NAGA PE=1 SV=2)

HSP 1 Score: 238.039 bits (606), Expect = 3.342e-75
Identity = 112/247 (45.34%), Postives = 156/247 (63.16%), Query Frame = 3
Query:   60 LLVLCIVVCGSDGLNVKTKNDFTATPPMGWLQWERYRCILDCETYPDDCIRDSLFMRQGKRLHDDGYAAAGYVHVNIDDCWSEMERDGNGTLVADKKRFPNGLKSLADYMHNLGLKLGIYTDMGTKTCAGYPAAIF-HMQKDTQTFADWGIDMIKLDGCNSCTDLFKAGHEAFKFYINQTGREIYYSCEWPTYLPEDKPKP-YADIAKVCDMWRNYQDVQDSWSSVMNIINYNGDHQDEMIPYIKPG 794
            +L+  +++ G     +   N    TPPMGWL WER+RC ++C+  P +CI + LFM    R+  DG+   GY ++NIDDCW    RD +G L+ D KRFP+G+  LADY+H+LGLKLGIY DMG  TC GYP      + +D QTFA+W +DM+KLDGC S  +    G+      +N TGR I +SC WP Y     P+  Y+ +A +C++WRNY D+QDSW SV++I+N+  +HQD + P   PG
Sbjct:    1 MLLKTVLLLGHVAQVLMLDNGLLQTPPMGWLAWERFRCNINCDEDPKNCISEQLFMEMADRMAQDGWRDMGYTYLNIDDCWIG-GRDASGRLMPDPKRFPHGIPFLADYVHSLGLKLGIYADMGNFTCMGYPGTTLDKVVQDAQTFAEWKVDMLKLDGCFSTPEERAQGYPKMAAALNATGRPIAFSCSWPAYEGGLPPRVNYSLLADICNLWRNYDDIQDSWWSVLSILNWFVEHQDILQPVAGPG 246          
The following BLAST results are available for this feature:
BLAST of TCONS_00012287 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NAGAB3.342e-7545.34Alpha-N-acetylgalactosaminidase OS=Homo sapiens GN... [more]
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