XLOC_002520 (gene) - C. hemisphaerica

Overview
NameXLOC_002520
Unique NameXLOC_002520
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000045:101956..106666+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002520 ID=XLOC_002520|Name=XLOC_002520|organism=Clytia hemisphaerica|type=gene|length=4711bp|location=Sequence derived from alignment at sc0000045:101956..106666+ (Clytia hemisphaerica)
ATCAGATTGAACTCAGTTGGTATTTTGACAACGTTTAAGAACAAGTCAAG ACACACAAATCTATAAAGTGAAACTCATATTTTATCATATTCTGAAGTAT CATATATCTTTATCGCTGTTTCACGTCAACGTTGAAAAAATCGTTGGAAG TGCTGGATTCTATATTTTGGGTATTTTGACTTGTACAAAAACCACGGAAG TCAAGACTTAGAGCCACCCACGCATTCAAAACAGACAAACAGTTAGATCG AAAAGAAAGGGAAAATACATAATCTAATCACCGAATTTCATAAACCAAGG TAAGATTTGTCTCTACTTTttagggacaagctggagtttttacaagctct tatttgatttggttggtcNAAATTAGAATCTGCGAGTTACAAATTtgtgg gacaagctggagtttttacaagctcttatttgatttggttggtcgttaag aagtaataaaagaatcttattactttttctaaagaacgcgtcatctctat cactttaaatgaccaattagtgaagtatcttgtaaaaactccagctaaTG CCACTTTTTATACAccactgtctcacagccccggtggaacatCTTTCCCA CAGCAGGGGTACTCTtagggcccccccgcttgttaatttttcgaaaattt tccaacccaacccccccccggaccttattaggaccccccgtttattaatc tctaagaatattttcagctgtcagagagaaggccccttattttgctctaa atNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAATAAACAGACAAA GCCGAAAACCGACAATCAACCGACAAAAACCGACAGTACACACACAAAAG ATCGTGTTACATCGAACCTCAAGTGGAGTGAAAAAATGATAAAACGCAAT ATCTATCAGATTGAACTCAGTTGGTATTTTGACAACGTTTAAGAACAAGT CAAGACACACAGATCTATAAAGTGAAACTCGTATTTCATCATTCTGAAGT ATCATAGATCTTTATCGTTTTTTGACGTCAACATTAAAAAAATCGTTGGA AGTGCTGGATTCCATATATTTTGGGTATTTTGGCTTGTACAAAAACCTCG GAAGTCAAGACTTAGAGCCACCCACGCATTCAAAACAGACAAACAATCAG ATCGATAAGAACGGGAAAATACCTAATCACCGAATTTCATAAACCAAAGT AAGCTTTGTCTTTGTCTTTACTTTTTATACACCACTGTCTCACAGCTCCA GTGGAGCTTCTTTCCCACAGCGGGGGTATTCCAATGGGAATAGAAAGTCT ATTGTCCCAAGCCTGACATATCCCAGTGGGAATAGTTTTGGGGTGCAATC TTTTTGCAGTAgatttcaaatggggataaaatctaAGTCAATCTACcgat ggggctgaaattgtagggtatatTTACCACagaattttggtgaaattttc cagtggggctgggctcGCAGTGGGTCTTtgacaaaggtttgtttttatga tTTCACACGAATAACCTACGTAAGCACAATAGTGAAATGAAGAGGTCCCA TCAAAGCTATCACGAATTCCTTGAAAGGAACGTTTATAATAAGGCAGCTC CATTGAAAGTTGGGAGACAAGGGTGGCTTTAGGTAGGATGAATAAAACCA AATTTGTATCATTCTTCTAGCAAATGCTAACTCAGCTCCTCAATTTAACA ATCAACTACTTAAACATAAAGGGACAGAGTTAGACTGTCAGTACGAAAAC TTACGTCTGTATAtgtaagaaaataaatttaacgACTTTTCTGATAAACT CTAGCACAACCTTCTCTAGGGTTGATAGGTGAATTgtaaaaaaaactata aatGAACTAGAAACTATAAATCGAAAACGAAATCCGCTTTAACTTAATGA TGTTCCTCTAAAAGCAGTTTCCGTGAAAAGATGAAATAAACATTGTACTG ACAGGAAAGTAGTTATTAATGTCAGCCTTTTGATTGATGTGCACGTGATT TTTATCGAAATGAAATGATAaagtttcgtcagccatctttgtTACGAGGA ATGATAAGAGGATAAACTAGttgaaataaagatttttggtttttaaatAT ATAGTATTTTGTTTTTATGGTTATTTGATAGACTGACAAAGAAATGAGAA ATCGTGCGAAGTCGTGTGTAAAACTGGTGCTTTCTCTTCGACATAATATT GTTGAGGCCTCTTAGCGGTTTAAACGATTGCGTGATTGGAAATTTTCTTG CGTGAAGGCGTGACTTTGACAACTCAGCGTGATGATGTGAATCTCAGCGT GTTACGCATGATTAGGCCAAAAACACGGCGCTATGCGTGATTTCGGCTGT TTTATTAGGCCTTTCTACAGTACTCATTTATCTCTAACGAAAAGGTTTTT ATAGTTTCTGTATAGGAAGTATAGGGGTCTGCTGCGGGTCAAAATACTGC TATTTTAGTCGACAAATATACAGTTATGAGAAAATTTTGGCGATTTTCGT GTTTGTAATAGAGCTAAAAGATGCATATGGCATGATAAAATACTCTTTTC ATGTTATTGGAAACTCGTCAGGATAGTATTGAAATACTGAGAACTCTCTC TAAATCGAATCactattatttgaatcttttcgAAAATGCTATAAATGTTT AAACTAGCCCctgcaattcgaatctttctctaattcgaataagatttttg gtcggattagagagagagtcaactgtactgAGATCCAATCCACGTTTTCT CGTCTAAAAAACTTCATGTCTATTCACAGGTATACTACAAGAACACAAAA TGAAGACAGGTCTCAACAGCAACTTGGCTGTCAAAAGTATCGGTCAATCT TTAGCCAAAATGGGGGACGATTTGAACAAGAAGTATACAAGCAATACAAA TAATCGAAATACCAAAACAAACAACTCCACTTCAAGCACTCGAGGAGGAT CCCTTAACTCGTCCACTGGCAATAGTACctacttgaataaaaatagcAGC AAACTTGGCAAGAAAAATACCTCGATGTAATATGAACTGGTGTGCAATAC AAGCAGAGGATTATGGGATATTGTTCACAATGACCTGGCACCAGGGTAGA AAGCTATACGAGGGGATACCCTTTTGTAAATAATGGTGCGCGTCCAGAAA ATAATGGTATTTGTATGCGATGAGATTTGGACTTTATTGTTGAGTTGGGA GAATAATTCTGGTCTTATCTAATGACATACAAGAAGTCTAATTCTAATAT TATCggtaaaataaaatattgtGAAATCTGTTTTTTGATCTCAGTCACAG CTTGACTGGAAtcgatgtacacgttttttttgtaagaacaaactatacat aaaaaaacataaggcttcgatggtcaaaatgttaagaacattgtaagact ttgtggactctaaaacactcaatttcttagaaaaattgacaaaatactca caaaatggtaaaaataagaacatgttaaaaacaattttaagcttcaaatt ctcaaaaagttaagagcatccgaaagcttcaaaaacttGTTCTCATAAAG AACGttatcaaaatatattataaaaggAAACAATGCCCTGAAATTTAATA CGAATTTTGCACTTTAACACTGTTTTATTATGACCTTGTATTTGGATAAA TTATTTGATTTCTGGGAGAGCCAACTTTCGTTTTAACACACAATGACATG CGATATTGTCGACCTTCATACTTCTCTCTCATCAAGTAAATAAACTAACT TGTACATAGTGTAATATAATCAGACAATTATTGAGTAATTTTTTATGATG TTTGTTTGTAAATATGTCTTcgcatgcaaaaaatcaaagaatcgaCAGTC aacattttgcaatttctcATAAGCTTGCAACGAAATATAAGATTACAATA CAGCCGTCTAGGAAAATATTATGGGTGTAGCCTTACAGTATCATAAAAAC TTCTGCCATTTCAAGACAGTAATAACACTGTTTATATAAGACCAATTTTA CAGGAACAAAGAGAATCTTAGAATGTCGAAATATAAGGACAACGCTGAGT CTGGTATAACTGCTCAGACTCAACGAGTGCAGCCTAAAATGCCTCAGTAT TGCCCTGAAATACAGGACCTGAGAACAATTTGAGACTCAAAGTGAGAACA GTCGATCCTCATccaaaacttcttttaaaaatcttaacATATagtcttac aaaaaaaaattagataaagCAAGTTATTTAGAAATTCAAACGTAGGCATT CTTCCGTTTCTGAAGCTCGTTAAGCAACGAGAGCCACGAGGTCTTATGTT ATTTAATAGCTAAATCTCATCCGCCCTTTTTCCCACGCCATTTTCGCCAC GTTCTTTGTCATGAGAGttggaaagagaaaaaaaacaaccaaaatgcaCG CAAAAGTTTTATCAGAGGAGTTCCTCTTAATAAGGCACAAGTTAGAATTT GAAAACACCCAAGTAAacctttttagtatttttgtcatCTACATGCTCAA AATATATTGTTAATTCTTATATTtaattattttgtaaatattttgtataG ATCATTGCAACCctataattttttattaaataattatcaaaaaaaacaat aatcagaaaaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004476TCONS_00004476Clytia hemisphaericatranscript
TCONS_00004477TCONS_00004477Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000045supercontigsc0000045:101956..106666 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02 0.06 0.02 0.1 0.47 0.26 1.61 1.45 0.73 0.25 0.3 0.45 3.3 2.56 2.74 1.67 0.79 1 2.83 1.37 6.69 5.95 4.6 4.04 3.27 2.86 1.36 1.72 2.43 3.36