TCONS_00012081 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012081
Unique NameTCONS_00012081
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length168

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012081 ID=TCONS_00012081|Name=TCONS_00012081|organism=Clytia hemisphaerica|type=transcript|length=168bp
ctttgacttacgcatatcaagaatttgaaaccatttttaaatatcgtgga
aactttggAAGCAGAGCTGCTGGATAGTCTTTATGCTTGAACACAATCAG
TATACTTATCTTAATTTTAATTGTATATAACTATTTACCCGCTAACtcgt
tttataaaatatttaccC
Run BLAST on NCBI

transcript from alignment at sc0000136:365110..365277

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012081 ID=TCONS_00012081|Name=TCONS_00012081|organism=Clytia hemisphaerica|type=transcript|length=168bp|location=Sequence derived from alignment at sc0000136:365110..365277 (Clytia hemisphaerica)
GggtaaatattttataaaacgaGTTAGCGGGTAAATAGTTATATACAATT
AAAATTAAGATAAGTATACTGATTGTGTTCAAGCATAAAGACTATCCAGC
AGCTCTGCTTccaaagtttccacgatatttaaaaatggtttcaaattctt
gatatgcgtaagtcaaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006792XLOC_006792Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012081-exon-sc0000136-1491911889:365110..365277TCONS_00012081-exon-sc0000136-1491911889:365110..365277Clytia hemisphaericaexon
TCONS_00012081-exon-sc0000136-1510915933:365110..365277TCONS_00012081-exon-sc0000136-1510915933:365110..365277Clytia hemisphaericaexon
TCONS_00012081-exon-sc0000136-1575043694:365110..365277TCONS_00012081-exon-sc0000136-1575043694:365110..365277Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000136supercontigsc0000136:365110..365277 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012081 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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