XLOC_000464 (gene) - C. hemisphaerica

Overview
NameXLOC_000464
Unique NameXLOC_000464
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000005:1339939..1345276+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000464 ID=XLOC_000464|Name=XLOC_000464|organism=Clytia hemisphaerica|type=gene|length=5338bp|location=Sequence derived from alignment at sc0000005:1339939..1345276+ (Clytia hemisphaerica)
AGCGAATTCTCTTGTTTGATAAAGTTATTTCACAAAATTGTTCTTCTTAA AGTTTAGTTTTGACAACGAATATCCGAACATCGGATTAATGTTGGCAAAC AATTTTCTGACCATGCAATGAAGCTCAAAATCGTTGTAAAAATTTCACTT CTGCTGGGACAGATTTATGGACCAGTTCTAAGTTTTCACGATTTGAGAAA TGGTGGAGATTCTCAAAGTTTGGCAAATTTCACAGCTGATTTACACATTA CTTCATCAGACAGTGATACTTGTCCTTATTCACACATCGTAACTTGTGGT TTCATGGAAAATTatcttcaaaaagatttttcagggGTAAGAATATGAAA CATTATAGGTTAAGTTTGAACACCCGCTTCTCACAgaacccactgggacc ccttcccactgaaaaaatgGCCGAAATATCGTCCCCGTTGGAAAATTATT CTCTAATTGTTTTCCCACTGAAAATAGTGAAATAAACCAATTCTCACtcc aaaatatttactatttttcccatccccactgaattttctgacttaaaaac aaaagaattgaaatccccagccataaaaaatatggcaatatcgatcccca tcgagtttcagtccgttatttttatccccactggttgAAAAGATCCCGGg tgggcagtgggtttaccaactgacggtatgtgcggcgaaaaaaagGCTTT TAGaatcacacccttacagtgaaatttttttttttgaagttcataccctt acagtgcattttttcaaattttaaagagcaaaaaagaaaaaagattttcg gtagatttgctaaaatttccacccatacagtgcatttatcaaaagtccac tcTTTCGGTGcatttttgctattttgaaaaacatacccttaaccgccgca catatcCGTCGGTCAATTTACCTGActacccccccctcccccccgggaaa agatcctaccgggtctgtgagaagggggtgtgtttGATATCAATCTGATG CTATTACAGGACCATTTTGTCGCTAGATGTTGGTTGCAAAGCTCGGATCG AAAAGAAATGTTCCGTGTAGAAATGAGTTTTCTCAGAATTACTTACATAC TATCTTATCTGCTTTTCTTTTTAGGTGACTTTCTACAACCAGAGTTCACA TTTTCTATTCAGCAACCACACCATCAAAGATCTACAAGACATTAATTCCC GTCTCATCATCACTTATGGGAAATGTTCTGGGTTTCATGGTTTCTATGTC ATCGTAGCTGAGAGAAACTATGGCTATGAGCATGCGCCATGTTTTCTTTT GTCAATCGAAACACAATTTATTAACGATATTTTACAGCAAATTGATTGGT TTAACCACGCTATCTTACACTTGAATCCAGTCTTCCTTGATTTATTACTA GCTTACTCGTCTCAGTACCCGAATCTTCATTTCGTTCACTTTTATCTTTT ATGGTCAATCAAAGAGCGAGATTTTGATGAGCTTAAAGAGAAGTTTATGT TCTTGAGACTAGAGAGAATAAATTCAGCTGATTTCGAACAAAGTCTCGAT CGATATGTTTTAGACTTTCAATACCAAAAGATTAATTTACAATCAGGCAC GAATAACAATAAATCGAGGTAACTATTACATAATGTCAAATTTCCGCAAT TCTTTTATTCTGTCAAAGGATTTTAGATATTGACTTAAGGTATCCATGTC GATATTTTGACGACCAGTCGCTACCGGACATTTAGTCTCACATGTCTCGG TTCCAGTCTTCTTTTTCCCGTACCATGATGGTAGCTTTTCTAACTTCGAA TTAAGtgctaaaatttatttttcccatcaaTGCTGTCCACAGCCATGCCT TCCGTGAATTCAACATCATACCCTTTCCCTGTCTAAGTTTCATTATATGC TAGAtttacaagatttttttaatgttgtGTCAGAGATAATGTGATCTTGC CCTAAAATCATCTCGCATACTGCATTCATATCCTTCTTCCAGAATCCTTT TTTAGATTGACTTATTTTTAACACCATTTATCTAGACATGTCGAGGATGC GAAACAAAACCGTTTAAGTATTTTACGACCAAATCAAAGtcgtaaaaaaa aacatgctattttgagccaaaaaatcacGATACGAGTTGCAACTGTATTT TTCAAGCCATTAGTTTTCGAATTTATTGATAACTCTACAACCAATCAAAA TGGAGTGTGCTTTAAAGGACATAACTGCCGTATTCCTGTTGTTCAAGATG AAACGAACCATAAAACAAGGATAGGCTGTTGTATTGGTTATTTTATAGAC GTTTTCAATTTGCTAGAACGTAAAATGGGATTCACATACGAGCTTTACGT AGTTCCCGATGGAGCTTACGGTGCTTTAATTGACGGACGCTGGAACGGAA TGATTGGAGAACTTGTCGCCGGTAGAGCAGACGTGGCGTTACAATCTTTA AGTGTTACGTATCAGCGCCAGAGAGTTGTCGACTTCGTTCCGTACCTATT AACGTCAAATTTTGGACTTATACGCTCGATATCAAGAACAGACcaaaaac aatctttcaaaattCGTTGGGATTTTGCCACTGCTTTATCCACCATGTTG GCAGCCTCCTTTCTATGTGCTACTATTCTAGTCATCGTTTTTCTTTACGT ACACGAAAACCTTTTACATTGGTTATTTGCTGCAAATGTTTATTTTCCAA TTGGGGAAATATTCACTTACACACTTGGACTAGCTTTTCAAAGAGATATG GGTGCACTGAACCCCCGTCAATGGTCAGGCAGATTGGTTGCACTTGGTTA CGCAGCCGCAATGACTGTCTTTATGTCAGCATATACAGCAAAAATATGTG CAAGTTCCATTGATAATCAACCTTTGGATGATTTCAAAGGATTTAGTGGA CCTGAGGTAAATTGGATGTTTTCTTAGCATTGCCATCTGCCTCTGGCAGC TCCTTCCTCCATTTTTACGCACGCCGTACCTAATTATACAATCCTGTAGC CTTCTTATCTGACACTCGATGTGtagaaatttccaaattttcgagaaaat gtTTACCAtctgaaattttattttcgGGAATTTTGCCAGACCACGTCATA TTTGGCATCGGGAGGCCTGAACTCTAACCCTCATTTCCGGGGACTGTCTG GTCCTACAACCTTTCAGGCTTCTAGGTAAAGAAAGTTcaacccgactggg gatgcggAATATCAAAGGGCGGCTATCATTCCTCCTTGATGGGGAATTGG CCCACTCCTTTATAGCTTTATcttgggcggccgccaatccgctattggaa tatcagataagtaaCAAAAATTGTCTGAAATAGAAGTTTCCAACTTTCTA CTATTTAgctttcaattttcagtttcaAAACCCATCCAATTCATACAAAA TTGGTACAATAACTGGAAGAGGACAATCTCaagaagaatattttaaaaat cataacTTGGAACAATATCGAAAGATGCACGATTTTATGCTGGAAAACAG CGTCCAATCAGACGAAGAAGCACttgaaaagattttaaatgGGTAAAAAT CGatatatttttacaaataattTTGAGCTTAAGAACTGAACTTAACTTTA TAACTGAATTTAAAGGTACCCTCTTAGtcctcaaaattaatttttcttcc GTTTGTGTAGAGTCTAACTCAAACACACAAAGTGAgtttcaatacacctt ttcgaccgtagccgccaattgccacgcGGGCATCTTCTtatccgttttac caccctcgACCCAatctttttttacacctttttctattgtctataggtgc gaaaaaagactgggacggttttagggtatGGTAAAACGGACAGAAAAAAT ACCCgcgcgcggcaattggtggttacggtcgaaaaggtgtatactgTGAG AAACACAGTTCggacttttttttgaaatttaacttttgaggtaccttatc ggggaaaacttcgtcggggaaaagtgacgaaattttgccaagcgacgaat atttttccccgacgaaaattttccccggccttaatgcgtttaccaactac cagcaagtgacgaatatttttccccgacgagaATTTtctccgacgaagtt ttccccgataaggtagcctatactagacgtcacggctTTTTTTTGCTACG ctgtaacgtctattccactttgcgactttttcgaatgttttgagcccagg ttttcgggctctaaacattcgatttttttgacgtcactttaaacgttTGA AACTTCTGCAGTATCAAAAAAGTCGAacttgcgtcaaaacacttgaaagg cttctattttttgaaaatcgtcaaagtggaactcactaaaaAACGGGATG AAAAActccggtttttggtgaggtgctcgctacctTTGAGGGCGTGTTGT GggaattttatcgcgcatgccTCAATGTTACTACTCTTCTAAAAGTAACA GAAGAGCATTATACTCTTCATTTTAGAGTGAAAACATTATATCGGTATAA ATGTTTGGATTTCCGCAGTTCCTTTGggacttaaaaaataaaattatagt AAAACTGTATTTTCTTGATTGAAGTTTCAAAGTCTTATTCCATGTTTAGA ACCCTACAAGCTCATATTATCGAAGTTACTTCAGTTGTACAAGGATTGGC ATCAAAGCTATCAAGACATTGTGATAAGGTTACCGTCTATGAAGAAAATC TTGGTCAGCACGAGTTAACTTTTGCTTACGCTAAAGGTTTTACGTACGGA AAACAAATCTCTGATACGTTACAACGTATGAAAGACCGTGAGAAATTCGA ACCAATACGTAAGAAATGGATTCAAGAGAGTTTTTGTTTTACCAAAGTCG TCTCGCAACAATTTGAATGGACCTATTTTTCAGGCATTCTTGTTATCATG GGTATTTCCTTAGTTTTAAGTATGCTCATAGTTTTGGTAGAGAACCTTTA CGTACATTTTGGTTTGAAGAATGCACTAGATCAAAAGAAGAGGCGAGGAT CTTTACAGAATGGAGCGTCCAGTTACAAACAAGCTGTTATCTCGAAAACA TCGAACCTTCCATATAGTGCAGATAATAATGCGATCATTTGGTAGTTTTA CACCCCCATCTCATAGAcatagctttaaaatgttcttaacttgttcttaa tattttggccatggaagcctttgctcttatatagtttttttttacgTGAC ATTAATCAAATATTCCGTTGTTGATTTGATAAAATTCAGACGTTTCTAGG TTAAAAAAGGGTAAGAATTCAATAAAAGATTACAATGTTAGTGTCGGTAA GCTAGCGGTGTCGTTTTTTTCGTCTAGTTTGATAGGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000746TCONS_00000746Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000746-proteinTCONS_00000746-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000005supercontigsc0000005:1339939..1345276 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.77 0.9 0.67 0.53 0.02 0 0.09 0.04 0.14 0.02 0.07 0.04 2.88 2.43 1.86 2.39 1.88 2.73 2.45 2.68 2.72 2.32 1.75 1.79 0.94 0.96 0.49 0.41 1.25 1.05