TCONS_00011634 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011634
Unique NameTCONS_00011634
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2499

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011634 ID=TCONS_00011634|Name=TCONS_00011634|organism=Clytia hemisphaerica|type=transcript|length=2499bp
CTTTTATCTCCGAAAGAATATGCAACATTGAAGAAACGGGTTCATAATGG
CGGCTTCACATGTGAACAACAAAACATGAAAGTTGCTGCTAGCGAAGAAA
GGTAAAGCGCTCAAATTTCCAAGCTTTTGGCCCTCTGCTCAATTCTAAAT
CCTCACTCTGCAACTTGGTTAAAAAGATGTCTCAACTCTCAATCGAAATT
CAAAAGGATGGGGAAACCACGGAAGGTCCAATTCTTGAAACATTGATCCA
TTTGATGAGCCAATGCAATTTGAAATATGATGAAATAAAAAGTGAAGAAG
ATTCCTCCTCGTCTGTGATTGTTACTTTCAAAAGTCAGGAGGAGGCAATA
CAAGCTATGGATAATTTAAATGGTATAGATGTCATGGGATCAAATGTAGT
AGTTACAGTGCCAGAGGAAGTAAATGGTGATGCAGAAGCAAGTCATGAAG
AAGAATCTAGACCACAGCATAGAGAAACTTATGATCGAAGAGGTGGCGGT
AGATACAATAGAAGGTACACAAGTCCAAGATATCAGAATCATATGCATGA
TCAATCACCAGGCAATTATGGTTACCAGCAGCAACAGCCACATCAACCAC
AGCAAATGGATCAATATCCATGCAGATTGCTGATACCAAGTCACATGGTG
AAAGTGATCCTGGGGAAAAATGGCACGACTATCACCAGTATTCAAAAGAA
GACTAACACTAAGATTGACATACACAGGGACAAAGGTAGTGGACGAGGGA
GACAAACGGATGATACGTTAACCTCCATCAAAGGTGATCCTGAAGCTTTT
TCAAATGCAATCAAAGAACTACTCACTGTAATCAATGCAGAGcttgaaag
tgaagaaaatgaagatcctATGCCCCTTCAATTGAAATTACTTGCTCATG
ATCTGTTGTGTGGCAGAATTATTGGCAAAGGTGGAAACAACTTGAAAAGT
GTTCGACAAGAATCtggcatcaaaaagctgatcaTTTCTAATTCCATTTA
CGACGAAGGAGGTCAATTCGGTCCCAATGGTATGATGGTGTCTTTAGGAG
AGAGAGTTATAACCGTTGAAGGAACGGTTGATGCAATTTCTGCTGCAGAG
AGAATCATCAGCCAACGGTTGCGCGATTACATGGAGAAAGATTTAAAGAA
TTCAACAAACAACCAACAAGTGAGTAACGGATATTGTGGTGGTGGGCAGA
CAAACAACTATTACGGCAGTGGCGGTAATGCTTCTGGTTCCTACCCTCAA
ATGCAGATGATGTATCCTGCCAGCCGAAACCCCTATCAGCAATACCCCAT
GGGTTACGCAGGTTACTATCCTTATCCATACACAAACACTTATCCTGGTG
TTCTTGGTCAAGGTTACCCTCCATTCAGCGGTGTCATGACCTCCCCACCT
CAAGCCTTATACGGGGAAGAAGAAACCTGTGCTATCCTCATTCCTACCAA
AGAAGTGGGCGCCGTCATCGGGCGGAATGGCGGATATATCAACAAAGTGA
AACAATATAGTAATGCACAAGTGAGAGTGGTGAAGGGTGAAGAAGGCGGT
GAAAGTAGGGTGGAGATTAGAGGAACGCCCGATGCTCAATGGCGGGCTTC
TCTATGCGTGTTTGGAAAAATCAAGGAAACGATGAAAGTACCTTACAGCG
ATGCTCAATTACGAACAGAATTCATGGTTCCAGGATCGTGTGTTGGTCGA
ATCATTGGAAAGAAGGGACAAGTCGTTCAAGACATACAAGATAAAGCTCA
GACTGATATTGAAGTTCCCAAAGATAAACAAGGGGGTGACGATGTTCCTG
TCTATATCACCGGTACCTTCAATGGCACACAGATCGCGTTAAATCGTATC
CGTGATATTATGCAACGAGCTCGCGTTAAACCGATGGCTGGCGAAGAAGA
ACAAGAGTGAGTTTTTGCTCCAATCCATCAAACGGTGTTTATGGTTAATT
TTCCATTGTACTCCTCAGTTAAATATCAAATCTTCAACTCGGGacagttt
ttaatttttaggtCAAATATTTTATGTAGCGTtttaaatcatcatcatca
tcattattgTAGTTTCACGAGTTTTACAAGTATTATTTCGACACCATTTT
ATAAATTCAGCGTCATTAGTTTaataatttgtttttgattCATTGTggaa
agatttccaaaatgttaTATTCAGTCCTTTGATTTGTAAAtagaatattt
tttatgaaaaatcaaaatttttatgctTACAGCTAAAAGTATTAGAACAA
AGTAAAGAACGGGTGcagtgaaaattttgaaacagtTATATTGACGTTTT
GCGTTTTTATCGGACGAACCGTTGGACGTTTTGAACCTATATTATGAATT
TATGTGGGCGGATAGGGCGTTATAAAGGTAACAGAATAGATTCATTGTGT
TATcaatagtgtggtcgtgttacaaaaatacaggctgtttgtaggaaaaa
aataagatctagctgaaactttctccagaccttctctataggatgctta
Run BLAST on NCBI

transcript from alignment at sc0000131:59433..71940+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011634 ID=TCONS_00011634|Name=TCONS_00011634|organism=Clytia hemisphaerica|type=transcript|length=12508bp|location=Sequence derived from alignment at sc0000131:59433..71940+ (Clytia hemisphaerica)
CTTTTATCTCCGAAAGAATATGCAACATTGAAGAAACGGGTTCATAATGG
CGGCTTCacattagcctggatatccaggctgtaaattatttcacagtcta
gctttagatattttatgttctgatttacagcctggtctccctagagcgat
ttgcattctcatatgagaatgcagtccgcttgcttgcgctcacttcgcta
aaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCTTCACATGTGAACAAC
AAAACATGAAAGTTGCTGCTAGCGAAGAAAGGTAAAGCGCTCAAATTTCC
AAGCTTTTGGCCCTCTGCTCAATTCTAAATCCTCACTCTGCAACTTGGTT
AAAAAGATGTCTCAACTCTCAATCGAAATTCAAAAGGATGGGGAAACCAC
GGAAGGTCCAATTCTTGAAACATTGATCCATTTGATGAGCCAATGCAATT
TGAAATATGATGAAATAAAAAGTGAAGAAGATTCCTCCTCGTCTGTGATT
GTTACTTTCAAAAGTCAGGAGGAGGCAATACAAGCTATGGATAATTTAAA
TGGTAAGATCATGATTAAATCTGTTTTATTCaggatagaccttttcgcct
ttccatccgccatcttgaattgtatgcaaaaatagaggaacgaaaaagcc
gtggttggatttagttggaaatatgcaaaacatatgcaagtttacaaaaa
gattaaaaagtcaaaaaagcatCTTATtaagcagttagtcacactagctt
cccgccaaaatgcgtatcaaagattttaaaatgctGCGAAAGATAGCCCC
TGCCCAGagttggcgaccggtctagtgtttgcgaccgaacgtctttgaac
ccagaaaagtcatgcaaaaacaaacctcttgagaatttcttttggtagta
atctgccttgacctatttcccgtactgtgtNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNcgtaagaaaaaacgcttcaactcccactccaaaaaatacttg
tccaaaacgatgaatatgttagaaagcatttctgtaaaaatcagctcgat
acagtttcctttgtttgaaatattgataaaaaagttgatacaATCAGCTT
CAAAATTTGATGTCCAGTCTGCGACCaaccaaactcaaaaaatgaaaaag
aagactctacattgcgatcaaaacattccagacgcgaagagaaaaaaaca
gacaaaaaattcccgcatttttatcaaatgaagactctccatagaccgcc
actttcaaaataaaacaaaacaaactatagaaaaaaatggcgacttgaag
aaaaattctgaataaacatgccgaagggaaatgtaagtaagctattttaa
aacaaaaaaacgagtgtaaataaatgtaatacgggaaagcttatgagttt
ttttatcatcctgatcaattaatTCTACCTTACCTGtaagtagagcactg
attttttCCTTCTTGCGATCGGTAGCAGACTGGTGGTACgtcggtcggga
actgggcactagtgCCTctcgcttcgaaagttttttattctaagaagatc
gcctcaaataaaaaatcaaaacaaacacgaagacatgttaaaagttgtct
aaccgttggttgagaaggattttcaaaaaagtaaaaagtaagtgaaaatt
ttgaatcaaaaaaattttggtcgccaactgggcagggtactctacttgac
tctcaagcaaaaaaatgcgccgcaaaacttctaaagagattcatgaaaaa
ataacccggcgctttttaatgaaattaacattttcagaaactatgagaaa
ttgcctaaaatttgagccatagatgaaaaaatttgagccaagccaacctt
caaaactaatttgaagatcaacttcccaagaaaaagatcgggggaggcgg
aacccacctagatccgcgcacccgctgtttcccggaaattttgccggacc
tcaaacaatgacccatttacatgtgtggaattatttttactttagcgtat
aaacaaggccttaaaaatcgaagcgctgtctcgggaattgaatgacaaat
tttagttggttgattttgcctgctgcacgttttattttgtttcaaacttt
caagttttgattaattgtcttgcgaacttgattcaggtaactgaatcatc
cttgttgtgcaaatacatcctgtagatgactgatggtGTTTTTTCTGaga
gctagatttcctagtgtgactaactgttaagaaatattataatcattaga
acaataaaagatggaatttcttaatccaaaaagaaatatttacagaacaa
caaaagccttttagaaatttgttcttaaagacattgcatattctgttttc
atgccattaaagaattccaccaagacggagtacacacatcaaactttcaa
aacgtGACGCAAATtgaaaagcagtaattatgacgtcacacattcagcgg
gttcaaatcaatgttttgatttgatcgtctgatggttctattcccaggag
aataatttaccgtccagccaaattaggaatatttttgtcctacgtgggtg
atttttcagcttgagtttatgtctaatgttatggttttttgaagtgcttg
ttctaagagatgagcgaatttgattatttctagttttcagaAGAAGCAAA
TTTAATCTTTCTTCTACaagattacactttaatataatgccaattatgca
tgtaagttttacattaatactttctttttgcatatgttttgcatactttc
taaggtaATTTCACCActgcaattcggccaccataatttttgcatacaat
tcaatattgcggatggaaaggcgaaaaggtctattaagtAGTGCTAGTCC
AGAGACTTGAGATCCCCTGCCTCTAGCTCTATTGAGCGCCATTCCAGAAT
AGGATCCTCCCGGCGCTCCTGAAACTTCCAGAGTTTTCCGGAGCAGctta
aaaaacactatttttctctccaGAAAGTTCCGGAGCTCTTCCGGTGCTTC
cagagcaagtgatttttaacacgTTCTAAAAAACCGTTTAAACATGGTtt
gaatttgtcacattatATTCAGAAGCATCACTGGTCGAAGtatcgaaaaa
attaaataacgTGAGGTTTCACTTCCATGAGTAggctgatttttttaaat
acactCATGCGCAGTTAGTTCTCACATGCATGATCAGCACTGCAAGCGCT
ATCGTAATTATATCGCGAATATCTTCTCCGGAAATTTCCGGAGTTCCAGT
GCAGACCAATCGCTGAAACTGTACCTTTGGAACACCCGAAGTGCTCCAGA
ATCTTCCTGTGTTCCGGAGCATGAAAGAAACGACACTTATTGCTCTGGCC
GTTTCCGGAGTGGCAGGAGGGTccttccagaatttgtctgtaacatgggg
gcggacgacacaggacttcagagggcaaaagtttttaccaaaattcgaaa
tttccaagatGAGCGAAAAAAACGTATGAATTTCCAAGACaattaattga
attaaaaaaggcaaaaaagagtacatggatttttattggaatttccgacc
accactgccactggaaaagaaaaattatttccaaggCTAGATAGAAtttt
aaaatgcacgtcgtccgacaggggagtaaaaaaaatttctggaatggccc
attccaGGCTGGGGGGGATAGTGCACAGCACGTCAAATATATTCGGAGTG
AGGGAGTTATTACTTTTGGTTTGGGAACGTGAAATGCGAACGCGAACTAC
TAatatgtctaaacttttcaatatatcacatcagtgtagacctaactctt
catacaaaaattacgggaaacgcatatttggactttttaccctatgctgc
actcaagcacttgagccaaaatcccgcaaaggtgggacaaaaatcagttt
tttgaagtttgcaaaaaacgccacatagaagacctttcaaattcagtatg
tgaatagagcagtaaaaaatacaacttttctatttttccttttttttgca
aaagttctaggaatgaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNgaatgaaaataaagggataatgataattgaa
tactatccattgatgatctgcggcactatcgtaaagctagaatcgcttcg
cgtactcttcacttgagaaaatgattgacagattgaagtttttcatcccg
cGGTGGGCGCCGCGTgggagctcgggcgctctgtgagagttctcggctca
atcctctgaccgcgctaaaaatggtagactgagctgtgatagatcatttc
gatggaagttgttggaatgtttacaaggctcttgacagaatgttgtttgt
tttattgtcaaagaTGCCAGTGtcgttataaattttgttagatctgacaa
attgatgtttgtaagtgcactttatagttttgattcccattgaagaatca
tattttggttttcatgttattagatgcctTTTTAGCGTTAGAGCTACACt
ttatatctccagaactaatagattttttgaaattctgtaaaaaggtccaa
gttcctaaatagttttactatggtttgtgaaaaaatcataaccatcagtg
aaatactctttcatctatttaagattgaagacaaaaatttgtgaagaaaa
ataaaccttgagcacaaaaaacttttttaaacactttttccaccgaaaaa
caaataacttttatagacttaccttcccaAAATATTGAAGAAGTCTCtgc
taattaaagtaaatgagataagataagataaaataaaaccttaaaatcaa
ccagcatttacaaccttttgtccaaagcaaaagacgtgcttttctcgcca
ccatcttgttttagaatgagaattatttttggTTCCAGTTCCCACagtct
ttttttcatccaatcagattgcacgatttcacttttgctttctctagtcc
aataagactgcgggatttgagtcatgtgacatctcgaTTGAAAAACCCGT
GCGGAATAAAATAGAattacagggggtcacactagtggctacaggaactg
aaagcaaacaaATAAGGCCAACatgtttggtttttctgaaggacaaaagg
tatatagGAAGCTTTATTGAtgaaggagggataaggctgggactatctat
ttaaaagaaatagacataaaaagaaactttcttgggtgataattaagatt
ttacttagaaacttagGGACTGGAGCGAATATAAAGTAAGATATTGGCGC
AAGTTAAAGCTTTTCAAGATGAGAGAGGCACACTGTCATTCTAACGCCCA
ATTTCATGATGCCAGGTTTAAGTCCCTCTTCCTCAACCGCTATATAACTA
CatatcgtcaactgctctaacttgggactatctgacaaaacatgtgACGG
CAATGCGGCCACcatttcatttgatttgagttaatggaTGGTGTATTAAA
GCTTTTTAGTGTGGGTGGCCGAGCGCATAAAAGTAACAtacgaaagcgaa
taaaatctaatacaatcaaacttaatcgcagcaatcgaacggcaaatctt
gggtaatattcaatttcaaattgcgttcaattgaatCGGCGTTCAATTCC
TttgattgacatcgtctggaaaTTTAActgtaagtgaaaatacaagccag
ataccgtgagattgggtaacttgtatcagtggaggctaacatgcatagcg
cTCAAATGataacctggctggtcattaaaatacaaagttaaatcaaaaca
aaaatgatagtagagctgcgagcagagctgcatagttcatttgtcttgaa
attttgctgctttgattggtcagtcatttgatggctatgcaagtttccct
cccaGTTTTCAGATCGTGGCAGAGCTGCCCCTGAGATATTTTTTGTGTGC
TGAATCTCTGCCCCTGAATTTTTCTGTGCTGTGTTTTGGTACCGCAATTG
AGATGTTCAATAGTGTTGAGGGCATTATTTTTCAGGACAGAAGACCGTGT
TTTGCCAAAAGGGCGGTCGATTGGGCATAAACTTATTAAGGTCCCTGATT
TTTAACTACTTATCAAAAtcatttacagaaaaaaagatGTTGGCCGTTGG
CGGTGGTCTGTAGATGCTGCCCTTGGGTTCTTGGATCTTGCACTTTCTGC
CCCTGCCCTGGTAAGAAGGTGCTGCCCCCGAGATCTCGATGAAATCTGCC
ATGATCTGAAAATtggtttccctccactgatgcaagttacccgacttcat
ggTAATCAACTGTCCcaatgtttcgaccaatcatcccaagtaagagcagt
tgacggtcgagtgtaaataaaatgtaaaactaatttagcaattttttagg
gtgagaaaatcaaatatcCCAGGGCTTTCGGGGTGTTTGCCCCCTGAACC
CCCACCAGCAGGGATAGGCTTATCAATAGGATCACAATTAAATTTGTATG
aaattttactttgaaaaatggaaaatttgaaaaatgaaggaaTTTCCATT
TGCCATTACTAAACCAAGGCAAAGGGTATGCTGAATCTCTTGGTATGTCC
TTCATGCAGAGTGTTAGTATATTAAGTCAATCTTGAATTTGTAGGTATAG
ATGTCATGGGATCAAATGTAGTAGTTACAGTGCCAGAGGAAGTAAATGGT
GATGCAGAAGCAAGTCATGAAGAAGAATCTAGACCACAGCATAGAGAAAC
TTATGATCGAAGAGGTGGCGGTAGATACAATAGAAGGTACACAAGTCCAA
GATATCAGAATCATATGCATGATCAATCACCAGGCAATTATGGTTACCAG
CAGCAACAGCCACATCAACCACAGCAAATGGATCAATATCCATGCAGGTT
TGTGGACGACGAATCTGTGTTTTTCTCCTTGCTAAATGAAGTCAAAGATT
TTCTATCATTAAAAGCTCTCAGAGCTTCCCAAAAGCATGTTCTAGGAGAA
CCCATGATGCGCCCCAAATATAATTTATCTCttctatatttattttattt
gtctGGTCAAATCAACAGGCCAAAACTACTACGCACAATCTTCAAACTTA
CTACCATCCTTTAAACTtcaagattaaaaaaaagatttcttataCTGATG
AATAAATGGAATCAGCATTTTTCATCTGTCATTCATTCATCCTGTCATCA
TTTTCAGATTGCTGATACCAAGTCACATGGTGAAAGTGATCCTGGGGAAA
AATGGCACGACTATCACCAGTATTCAAAAGAAGACTAACACTAAGTAAGT
AAACTAAAAATGGTTGAATATACTTGTATACTATATTTTACTTTAGGGAG
TGTGACGATAGGAAGAGgtttaaataaaataattctgaagGATTCCTTTC
CTAGAATTCCAAAACTCTTTACTGTTAAAATCATAATCGTAAATCAGTTT
TAGTTTAGACGGTCCACTTATCGCCCTACccattctaattgtgaattaaa
gtggataataaagtgggctgtctaaagtcgaTGCCCTCTTTTGCCGTCAA
TGCATGCATGATTTCTTTtaatcttttccaagcaaagattttaactgcca
actttatgcccactttttgcctactctaacaattagaataggcagggcag
aaagtcggctgTTTAAACTAGAGCTCATTGTTTAGTGGTGCCCCCGCACT
ACGATTCGCATCGCTTTGTAAATAACCTAGGTCAGCACATGCTATAAGGG
GAATAAAGCTAccactactctgatacaagatAAAGAATAGAAGATGCACC
ATTTTTCAATTGAAATTACCTTTACTTTTCCAGGATTGACATACACAGGG
ACAAAGGTAGTGGACGAGGGAGACAAACGGATGATACGTTAACCTCCATC
AAAGGTGATCCTGAAGCTTTTTCAAATGCAATCAAAGAACTACTCACTGT
AATCAATGCAGAGcttgaaagtgaagaaaatgaagatcctATGCCCCTTC
AATTGAAATTACTTGCTCATGATCTGTTGTGTGGCAGAATTATTGGCAAA
GGTGGAAACAACTTGAAAAGTGTTCGACAAGAATCtggcatcaaaaagct
gatcaTTTCTAATTCCATGTATGTACACTTATTTTGAAGTCCAAATTTGG
TTTAATATtgggtgtgccacaaaaaagttttcttcTGGACTTAATTTTCT
CGCTCTCTTTGAActctaaaataataaaaattgttGCCTTGGAAAGGGGA
AGATTATTAATTTTCTTAGCTCAAAAGTTGTGTTCAAATGAATGAAAAAC
TCACTTTCAAAAAGTgcttgaaaatgtttaaaatctgGCTATCAAATTAA
ATATTTGGAGTATGCATTCTATCATTTATTTCAAGTATAAGTTTAGAGAT
GAATTTTAAGTTaataaatttgtgtttttaAACTGCAAATTGCAAACAAA
AGCTCATTATCAAAAGGTAATTGCTATTGTCGTTTTTAGAAGCAAATTTG
ATAAGCCAATATTTGACTTTTTTCGTTCATTCTATCATTTATTTGAACCA
ATGAACCAAATTTCTCTCTTTCAGTTACGACGAAGGAGGTCAATTCGGTC
CCAATGGTATGATGGTGTCTTTAGGAGAGAGAGTTATAACCGTTGAAGGA
ACGGTTGATGCAATTTCTGCTGCAGAGAGAATCATCAGCCAACGGTTGCG
CGATTACATGGAGAAAGATTTAAAGAATTCAACAAACAACCAACAAGTGG
TAAGCTGATTAGATTTTTATTGCAACACTTATGTAGCTTACAAATGTGGA
TAAAGGTTAATGACCTCAGAATTGTTATTGGACAGTGTTGTCCTCCATTG
CGATAATTAAGCTcctttctctttgaaaaaagaattgctTATGctaattc
tacaacaagaaaaAACAGACCATGTATTTGAAATGATTCTTTGTGCATCT
AAGTATTACGAAGTGAAAGGTGTTATGGACTAATGAAAAGTTCCTCATTA
CGTAAGgtaatattcatgatatgcaccgtcattgcaatgtcttccccGAC
CCAAcagatgattggttgaaagtaacgtaaaatcagtcattACGTCACTT
ACacccaatcagctattgggtccgttatgtaatatcagaagacattgcaa
tggtgcatgtTATAAATAAACATGATTTGGAATTCCATTTTCCTCACAGA
GTAACGGATATTGTGGTGGTGGGCAGACAAACAACTATTACGGCAGTGGC
GGTAATGCTTCTGGTTCCTACCCTCAAATGCAGATGATGTATCCTGCCAG
CCGAAACCCCTATCAGCAATACCCCATGGTACGTTTCTTATGGAGTACTT
TATAGAGGTTTTGGATATCTCTTCACCTCATATTATCTGGCACTTTGGGT
AATGAATTCGTTAACCAGTATCAGTGaggaagtttgtttttgtttcattt
gttgcgggatttgataaattgtttttttcttatcaCATGCAAAAGCTaga
atctcaaaattttcaacacCTTCCCTTCATTTGCATTTAACAACTTAAAA
CTTGGTGTCATTGTTTGTGATTTTAGGGTTACGCAGGTTACTATCCTTAT
CCATACACAAACACTTATCCTGGTGTTCTTGGTCAAGGTTACCCTCCATT
CAGCGGTGTCATGACCTCCCCACCTCAAGCCTTATACGGGGAAGAAGAAA
CCTGTGCTATCCTCATTCCTACCAAAGAAGTGGGCGCCGTCATCGGGCGG
AATGGCGGATATATCAACAAAGTGAAACAATATAGTAATGCACAAGTGAG
AGTGGTGAAGGGTGAAGAAGGCGGTGAAAGTAGGGTGGAGATTAGAGGAA
CGCCCGATGCTCAATGGCGGGTAAGATAATCGATAATTAACAAGTTTGAA
TTTTGTAACTTGTGTATGAAACTTTATGTTCACTTTGCGTGCAGACTTGC
CTTAAAGATGCCTTTCTTTAGTATTTGCTTTTAAATAGACCCTAATGTGG
GTGTGTATAATGAtgtatttaaagtaaaaattgatCGAATCTTTAAAGCG
TCCAttccaaaaaaagatttcaactgTGATTGGAGATTAAGTTGAACCAC
CTCTATGGGTGCTATCGAATCGGCGCGCTTGGTGGCACCGACTGCAAAAA
GAACATATTGAGTAAGAACCTCTTCTTCTAGAAAGGCTGGTAATAACATT
CATCCCTTTCTTCCGTTACAGGCTTCTCTATGCGTGTTTGGAAAAATCAA
GGAAACGATGAAAGTACCTTACAGCGATGCTCAATTACGAACAGAATTCA
TGGTTCCAGGATCGTGTGTTGGTCGAATCATTGGAAAGAAGGGACAAGTC
GTTCAAGACATACAAGATAAAGCTCAGACTGATATTGAAGTTCCCAAAGA
TAAACAAGGGGGTGACGATGTTCCTGTCTATATCACCGGTACCTTCAATG
GCACACAGGTACTTGCACTGCCTtcgttttgtattttttcattcACTTTC
AGCAAAAAGTGTTCATTTTCATCAAGTTAAGTGCTCTTTTATATAACATT
GGATGTAGCATTTTGTCTGTTACTACCCTGGAGCTTTAATATCTTGGAAA
CCCCGATAAACGACCTAAAAGTTGGTCGAAAAAATCTTGATATTTCAGTG
GTTTAAGTAttatttattatatacctgtaggcaaaaacaggccattgaat
aattcctgatataccatggctattataccacggtagaattttttttcaaa
ttttgctttcaaagtttgatttttttgttgctgttgttgttatcaaagaa
attcattaaaataaatcccttgtcaatttcataaacaaattttatgactc
taagtaattaagaaaatcattaaaaaagaaaaacattcgaacgttcgatt
atgggagtgttttaagtGAAACGTTTGGCCATTGACATaattaatgtttt
atttttgcctggaggtatataataaaacatatattcaataggttttcgtt
ggttattggatttattaaccctcggtgatgtatattcaactcggcttcgc
ctcgttgaatattacatcaccgagggttaataaatctcaataaccaactt
ttacccattgaatatctgcttaatattcCACTCTTTTTCAGATCGCGTTA
AATCGTATCCGTGATATTATGCAACGAGCTCGCGTTAAACCGATGGCTGG
CGAAGAAGAACAAGAGTGAGTTTTTGCTCCAATCCATCAAACGGTGTTTA
TGGTTAATTTTCCATTGTACTCCTCAGTTAAATATCAAATCTTCAACTCG
GGacagtttttaatttttaggtCAAATATTTTATGTAGCGTtttaaatca
tcatcatcatcattattgTAGTTTCACGAGTTTTACAAGTATTATTTCGA
CACCATTTTATAAATTCAGCGTCATTAGTTTaataatttgtttttgattC
ATTGTggaaagatttccaaaatgttaTATTCAGTCCTTTGATTTGTAAAt
agaatattttttatgaaaaatcaaaatttttatgctTACAGCTAAAAGTA
TTAGAACAAAGTAAAGAACGGGTGcagtgaaaattttgaaacagtTATAT
TGACGTTTTGCGTTTTTATCGGACGAACCGTTGGACGTTTTGAACCTATA
TTATGAATTTATGTGGGCGGATAGGGCGTTATAAAGGTAACAGAATAGAT
TCATTGTGTTATcaatagtgtggtcgtgttacaaaaatacaggctgtttg
taggaaaaaaataagatctagctgaaactttctccagaccttctctatag
gatgctta
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006529XLOC_006529Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011634-exon-sc0000131-1491911889:59433..59484TCONS_00011634-exon-sc0000131-1491911889:59433..59484Clytia hemisphaericaexon
TCONS_00011634-exon-sc0000131-1510915933:59433..59484TCONS_00011634-exon-sc0000131-1510915933:59433..59484Clytia hemisphaericaexon
TCONS_00011634-exon-sc0000131-1575043694:59433..59484TCONS_00011634-exon-sc0000131-1575043694:59433..59484Clytia hemisphaericaexon
TCONS_00011634-exon-sc0000131-1491911889:60065..60384TCONS_00011634-exon-sc0000131-1491911889:60065..60384Clytia hemisphaericaexon
TCONS_00011634-exon-sc0000131-1510915933:60065..60384TCONS_00011634-exon-sc0000131-1510915933:60065..60384Clytia hemisphaericaexon
TCONS_00011634-exon-sc0000131-1575043694:60065..60384TCONS_00011634-exon-sc0000131-1575043694:60065..60384Clytia hemisphaericaexon
TCONS_00011634-exon-sc0000131-1491911889:66777..67029TCONS_00011634-exon-sc0000131-1491911889:66777..67029Clytia hemisphaericaexon
TCONS_00011634-exon-sc0000131-1510915933:66777..67029TCONS_00011634-exon-sc0000131-1510915933:66777..67029Clytia hemisphaericaexon
TCONS_00011634-exon-sc0000131-1575043694:66777..67029TCONS_00011634-exon-sc0000131-1575043694:66777..67029Clytia hemisphaericaexon
TCONS_00011634-exon-sc0000131-1491911889:67340..67426TCONS_00011634-exon-sc0000131-1491911889:67340..67426Clytia hemisphaericaexon
TCONS_00011634-exon-sc0000131-1510915933:67340..67426TCONS_00011634-exon-sc0000131-1510915933:67340..67426Clytia hemisphaericaexon
TCONS_00011634-exon-sc0000131-1575043694:67340..67426TCONS_00011634-exon-sc0000131-1575043694:67340..67426Clytia hemisphaericaexon
TCONS_00011634-exon-sc0000131-1491911889:67966..68250TCONS_00011634-exon-sc0000131-1491911889:67966..68250Clytia hemisphaericaexon
TCONS_00011634-exon-sc0000131-1510915933:67966..68250TCONS_00011634-exon-sc0000131-1510915933:67966..68250Clytia hemisphaericaexon
TCONS_00011634-exon-sc0000131-1575043694:67966..68250TCONS_00011634-exon-sc0000131-1575043694:67966..68250Clytia hemisphaericaexon
TCONS_00011634-exon-sc0000131-1491911889:68707..68881TCONS_00011634-exon-sc0000131-1491911889:68707..68881Clytia hemisphaericaexon
TCONS_00011634-exon-sc0000131-1510915933:68707..68881TCONS_00011634-exon-sc0000131-1510915933:68707..68881Clytia hemisphaericaexon
TCONS_00011634-exon-sc0000131-1575043694:68707..68881TCONS_00011634-exon-sc0000131-1575043694:68707..68881Clytia hemisphaericaexon
TCONS_00011634-exon-sc0000131-1491911889:69332..69460TCONS_00011634-exon-sc0000131-1491911889:69332..69460Clytia hemisphaericaexon
TCONS_00011634-exon-sc0000131-1510915933:69332..69460TCONS_00011634-exon-sc0000131-1510915933:69332..69460Clytia hemisphaericaexon
TCONS_00011634-exon-sc0000131-1575043694:69332..69460TCONS_00011634-exon-sc0000131-1575043694:69332..69460Clytia hemisphaericaexon
TCONS_00011634-exon-sc0000131-1491911889:69709..70002TCONS_00011634-exon-sc0000131-1491911889:69709..70002Clytia hemisphaericaexon
TCONS_00011634-exon-sc0000131-1510915933:69709..70002TCONS_00011634-exon-sc0000131-1510915933:69709..70002Clytia hemisphaericaexon
TCONS_00011634-exon-sc0000131-1575043694:69709..70002TCONS_00011634-exon-sc0000131-1575043694:69709..70002Clytia hemisphaericaexon
TCONS_00011634-exon-sc0000131-1491911889:70354..70590TCONS_00011634-exon-sc0000131-1491911889:70354..70590Clytia hemisphaericaexon
TCONS_00011634-exon-sc0000131-1510915933:70354..70590TCONS_00011634-exon-sc0000131-1510915933:70354..70590Clytia hemisphaericaexon
TCONS_00011634-exon-sc0000131-1575043694:70354..70590TCONS_00011634-exon-sc0000131-1575043694:70354..70590Clytia hemisphaericaexon
TCONS_00011634-exon-sc0000131-1491911889:71274..71940TCONS_00011634-exon-sc0000131-1491911889:71274..71940Clytia hemisphaericaexon
TCONS_00011634-exon-sc0000131-1510915933:71274..71940TCONS_00011634-exon-sc0000131-1510915933:71274..71940Clytia hemisphaericaexon
TCONS_00011634-exon-sc0000131-1575043694:71274..71940TCONS_00011634-exon-sc0000131-1575043694:71274..71940Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000131supercontigsc0000131:59433..71940 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.92748	7.68854	1.11583	1.29541e-08	94.7669	83.3191	36.7564	59.5474	24.9137	31.8921	47.0136	30.1946	17.041	29.9506	23.5036	24.0215	25.8935	27.2982	6.28563	10.9625	23.8212	20.9143	32.776	22.6004	60.4449	44.4708	20.2698	12.9794	7.65674	10.0299
Blast
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BLAST of TCONS_00011634 vs. Swiss-Prot (Human)
Match: IF2B2 (Insulin-like growth factor 2 mRNA-binding protein 2 OS=Homo sapiens GN=IGF2BP2 PE=1 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 1.516e-47
Identity = 130/427 (30.44%), Postives = 208/427 (48.71%), Query Frame = 3 
Query:  621 CRLLIPSHMVKVILGKNGTTITSIQKKTNTKIDIHRDKGSGRGRQTDDTLTSIKGDPEAFSNAIKELLTVINAELESEENEDPMPLQLKLLAHDLLCGRIIGKGGNNLKSVRQESGIKKLIISNSIYDEGGQFGPNGMMVSLGERVITVEGTVDAISAAERIISQRLRDYMEKDLKNSTNNQQVSNGY----CGGGQTXXXXXXXXXXXXXXPQMQMMYPASRNXXXXXXXXXXXXXXXXXXXXXXGVLGQGYP-----PFSGVMTSPPQALYGEEETCAILIPTKEVGAVIGRNGGYINKVKQYSNAQVRV--VKGEEGGESRVEIRGTPDAQWRASLCVFGKIK-ETMKVPYSDAQLRTEFMVPGSCVGRIIGKKGQVVQDIQDKAQTDIEVPKDK--QGGDDVPVYITGTFNGTQIALNRIRDI 1859
             R+L+P+  V  I+GK G TI +I K+T +++DIHR + SG   +      +I   PE  S A + +L ++  E +  +  + +P  LK+LAH+ L GR+IGK G NLK +  E+G K  I  +S+ D         + +   ER ITV+GTV+A ++AE  I ++LR+  E D+        +  G      G   T     S        P     +P + +                      G     YP     PF      P    Y E+E   + IPT+ VGA+IG+ G +I ++ +++ A +++   +G +  E  V I G P+AQ++A   +FGK+K E    P  + +L     VP S  GR+IGK G+ V ++Q+    ++ VP+D+     ++V V I G F  +Q A  +IR+I
Sbjct:  196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKP----VTIHATPEGTSEACRMILEIMQKEADETKLAEEIP--LKILAHNGLVGRLIGKEGRNLKKIEHETGTK--ITISSLQD---------LSIYNPERTITVKGTVEACASAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTH---------------------SGYFSSLYPHHQFGPF------PHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPDENEEVIVRIIGHFFASQTAQRKIREI 578
The following BLAST results are available for this feature:
BLAST of TCONS_00011634 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
IF2B21.516e-4730.44Insulin-like growth factor 2 mRNA-binding protein ... [more]
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