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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001008 ID=TCONS_00001008|Name=TCONS_00001008|organism=Clytia hemisphaerica|type=transcript|length=788bp
CTTTAGTTCAGCAAACGTTATAGCAGATGATGTTTCCAGCCCAGACGGAG
CGAAGGCGATCCCATACCTTCTCTGAAGGTGTCTTTGACGAAGCGGTCAA
GGCCCATGGAGATCTACTTTCTCCTGAAACCGCCAAGAAGAATGATCTGT
GTCGACAATACAGTGAGGGATCACCAGCTTCATTGAAAAGGACAGACACC
CGATCTCCtatccttcaaaaacttcataAAAAATTCTTCAGTCATGAGGC
GAACAGTCCGACCAATTCACTGGAAGATTTGACACCTCGATCACGTTCTG
GTACTGGTAATTCAATCGAACGCTTCTTCAAGAGAGATGGTTTGTCATTA
CTCCTTAAGCCAAAGCGTCAACCCCCCAGACATTTTGTGGGGGGGGGTGA
CacccaaaaaaatgcaaacgaAAACTGGGAGCTAAAATACAGCCAAATAC
TCGGGGGCTGACATGTTTGGGCGGGGCTGgacttttaattttatttcgtc
tattatttttctttatatcaccacatttttatccaaaaaccatttagtag
ggggaattttgttcgattttttagaatcgctcgactgttttgttagaagc
acttgttatacatttttggaaagctaaggggtaggggaatcgaaattact
atgtttccaattttttttcggacactttggtgtgattttcggacaaatat
aacggtctcaggcaaaaattatagggttaaaaattaatgaaaattttagc
tcgagaaaacggagacttgttgtatatttttggaaagc Run BLAST on NCBI transcript from alignment at sc0000007:646012..647009+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001008 ID=TCONS_00001008|Name=TCONS_00001008|organism=Clytia hemisphaerica|type=transcript|length=998bp|location=Sequence derived from alignment at sc0000007:646012..647009+ (Clytia hemisphaerica)
CTTTAGTTCAGCAAACGTTATAGCAGATGATGTTTCCAGCCCAGACGGAG
CGAAGGCGATCCCATACCTTCTCTGAAGGTGTCTTTGACGAAGCGGTCAA
GGCCCATGGAGATCTACTTTCTCCTGAAACCGCCAAGAAGAATGATCTGT
GTCGACAATACAGTGAGGGATCACCAGCTTCATTGAAAAGGACAGACACC
CGATCTCCtatccttcaaaaacttcataAAAAATTCTTCAGTCATGGTTa
gttcaaattttctttaaacaGTTTGTACataaatctttgaaattttcgAG
GAGATCTTCCGGTTGCCTTTTCGAATAGAGGTAAGCTTTTGTTATGTGTT
ATGACACTAGTTTTTCGGGTTTATTTTGTCAGCTGATGCTTCCCACGTGT
GAATCTGTTTTGGTGTTGGAGTTGTACTTTTGATACTTTTCCATCTGAAT
TTACAGAGGCGAACAGTCCGACCAATTCACTGGAAGATTTGACACCTCGA
TCACGTTCTGGTACTGGTAATTCAATCGAACGCTTCTTCAAGAGAGATGG
TTTGTCATTACTCCTTAAGCCAAAGCGTCAACCCCCCAGACATTTTGTGG
GGGGGGGTGACacccaaaaaaatgcaaacgaAAACTGGGAGCTAAAATAC
AGCCAAATACTCGGGGGCTGACATGTTTGGGCGGGGCTGgacttttaatt
ttatttcgtctattatttttctttatatcaccacatttttatccaaaaac
catttagtagggggaattttgttcgattttttagaatcgctcgactgttt
tgttagaagcacttgttatacatttttggaaagctaaggggtaggggaat
cgaaattactatgtttccaattttttttcggacactttggtgtgattttc
ggacaaatataacggtctcaggcaaaaattatagggttaaaaattaatga
aaattttagctcgagaaaacggagacttgttgtatatttttggaaagc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001008-exon-sc0000007-1491911889:646012..646257 | TCONS_00001008-exon-sc0000007-1491911889:646012..646257 | Clytia hemisphaerica | exon |
| TCONS_00001008-exon-sc0000007-1510915933:646012..646257 | TCONS_00001008-exon-sc0000007-1510915933:646012..646257 | Clytia hemisphaerica | exon |
| TCONS_00001008-exon-sc0000007-1575043694:646012..646257 | TCONS_00001008-exon-sc0000007-1575043694:646012..646257 | Clytia hemisphaerica | exon |
| TCONS_00001008-exon-sc0000007-1491911889:646468..647009 | TCONS_00001008-exon-sc0000007-1491911889:646468..647009 | Clytia hemisphaerica | exon |
| TCONS_00001008-exon-sc0000007-1510915933:646468..647009 | TCONS_00001008-exon-sc0000007-1510915933:646468..647009 | Clytia hemisphaerica | exon |
| TCONS_00001008-exon-sc0000007-1575043694:646468..647009 | TCONS_00001008-exon-sc0000007-1575043694:646468..647009 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007 | supercontig | sc0000007:646012..647009 + |
Blast
The following BLAST results are available for this feature:
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