TCONS_00011114 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011114
Unique NameTCONS_00011114
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2229

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011114 ID=TCONS_00011114|Name=TCONS_00011114|organism=Clytia hemisphaerica|type=transcript|length=2229bp
ATTTTTTACCACTATCTTATTATATTTTCAGATgtagaaaaatgaaataa
tagaTAGAAAATAAAATCGACAACACACACGCACATACACCACACATACA
CCTGCACATACACCAGACATTCACAATCTCATTATTACATAGAAAATGAT
CACCTACATTTGGCTTCTCCTGTTATCggtcttcTTTTTTGGCCTTATTG
ATGGAGCTGACATCAAGTTCACAGATTCAAAGAGCTTGGTCACTGTAGAA
TCTGGCAATAATGTCACGTTAATGTGGAACTTGTATAACATTGAGAGGAG
AACAACTATAGCTCTATACTTTGATAACAAAAAAAACGAGATAGGATCAC
TATCAATCTCATCGATCACAAAAAATTACACAGATTGGACACTTGATACA
AAACCTTTGGCAACCAAGATAAAAGACTTCAAGATTGTGCTTAGTGAGGG
AAATGGAACTTTCGGATTTGTTTTGGAAGATTTGAGATATGATGACAGTA
GTGTCTTAATTGTGACCAATGAAGACAGTAGTGGGATTAAAGCACAACAC
AAGTTAACTATAAATGTTGAAGGTGGACCACATGAGTGCGGAGTCAAATC
ATTACCACAAAACATCACTTGCTCACATGACCAAGTCATTACACAAAAAA
TCACTCTCTGTGGAAAGCCTCAACCCGAAGTTACTTGGAAAATCGGGGAC
ACAGAATTTAACGGGACAGTTGGTAAAACTGAAACAGATAAACATCAATA
CATATACACCTTGAAAACGAAACTGACGTCAGACATGTGTGGAAGAAAAC
TTTCGTATGTAGCCAATGGTTATCATCGAAAACGAACCGCTAGTAGTATG
ATACTGGTGAAAGGCTCTGAGCCAGACGATGACGTTGATGGACTTGTGGC
ATGGGAAATCACACTTATCGCTCTCGCTGTTCTTTTCGTTGCGGTGGCAC
TCTCTGTGTTTGCTTACACCAAATATCGAGCCCATAACCAAACAAGAGAC
ACCACTGctaCGAACAACGAGACTCGATCATTGAATTCGGAGAAAGTGTA
ATCTGGATCAGGTGAAAACATCTTTGGTATTTTCACTTTCCATGTATGGT
GGACTTTAAATGACACTGGTAATTGTCGATGAAGCATCTTCTGTTCTGTG
AATGACTTTGCGAACATACAAGCGAGCACGAATTGTTTGAAATTTGTTAT
TACAAAGGAAACTCTACCATCCGCCTATATACTTGTAAAATATTATCGTA
GGAGTTGATTATCATTTTATAGATGCCGAATAAATGGTTTACCGTACGGT
acctttgttttagttctttgtCGGGGAAGGGGGTAGCCAAGcgggcacac
gacgttgtttcaacgttcatttaacgttatatggatgttgtgaacgttag
ataaacgtcaaaaaacgtcaaaaaaacgttGTGCGCCAGCTGGGAGGTGT
CCAATTAGTTATCAATTCATTTTCAATCTATTTTACATTATCAATCTATT
TTTATTATGTCATTTTGATTGGTCCTACGCAATCTGAACGCACCTTTATT
ATTTGAGATTTACATTAACTGTTTCATTTGTAAATAGACGTTATTATGCC
AtgtcttttgatgttttttattacGATGGCAGGTAGTATAGCAGAAATTG
TCCCATTCCTCTAAAGAATACTAACATCGAGGGTCAGGAGAGGCACTGCA
CCTAAGgcgcaaaaagtaaaaaatcttcCCCGACAATTGTTTCCTAAAAT
TTTAAATGGCTTGCCGGGACGGGACTCTTTCCATCTCAGAAAGTTCACCC
CTTGGTTTACCTTATTGCCCCTTTCCCTCTTAAGAATAATAAAAACGTGA
ATACTTTCCCTCTAACCCTCCCAGAAAGTTTACTCCTTGGTTAGCTACAT
TGAAATATAGGGGCATTGACATTTAGCATTTCCAATGCAATTTGATGTTT
GTATGGGATGTACAGAAATGTCTACTCTAGCAGATTTAAGTAAGGAAtat
atttttaaggtttttgttttattcAGTATTCAATTTTAAGGCATTTCTTC
TTAATGTACGGTATTTTTATTTGACTTCAAAGCCCCTTCAAAGCCTGatg
ggctagactcgagactcctggaacggaaatgaagccacttatttcccatc
cagaacgcccgcgcgtggtttttacatgAACGCCggattaaaagtaaaat
ctatcgccagatttcgaaaaatgcagtcc
Run BLAST on NCBI

transcript from alignment at sc0000121:554063..570340+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011114 ID=TCONS_00011114|Name=TCONS_00011114|organism=Clytia hemisphaerica|type=transcript|length=16278bp|location=Sequence derived from alignment at sc0000121:554063..570340+ (Clytia hemisphaerica)
ATTTTTTACCACTATCTTATTATATTTTCAGATgtagaaaaatgaaataa
tagaTAGAAAATAAAATCGACAACACACACGCACATACACCACACATACA
CCTGCACATACACCAGACATTCACAATCTCATTATTACATAGAAAATGAT
CACCTACATTTGGCTTCTCCTGTTATCggtcttcTTTTTTGGCCTTATTG
GTAGGTTTAAAATTCTTTGCATCCTCGCTTGTTTTTTCGACCAACTAAAG
TGGCTGATGATACGAAACAAATAATCTTTAAATCGAGTGTTGGGTTACCT
TAGCCCACAACCCGTATCCAGTGCCAAAATATATCTAAAAACAAAAGCTT
TTTAACTAAACTAAAAGTTATTAACATTTTGAAGGTTTACTGTGACTTTT
ACAATCGTTTCTATGATGAAGCCTAAATACATTGagaaaatttagaaaca
aaGACGGGATAGATGATAAATTAAGACCATTTCGATacacatttcttttt
ttataaaggaACCCCAATTTTCGGCTCTGACTGCAGTTGCTAAGGATTTT
ccgtttttttgccaaaaagttgCTTATGGGTTTTTTAGCCAAAAATGCAT
AAcaacttcaaattttttggctttttatcTCATCTTTCGTCCAAAATTTG
GTGTTCAAATACCATCAGTACACATTTTAATGCCAAATAATCCTGAAAAT
GCCTCTTTTCAAggtatttttggtatttttggtatttttggtTGCTTATC
AGCTTCATTCTCAGTTTCACGGCTAGGTTGCTAAGGCTAAGTTGCTTAAT
ATTTTTGGCTATTCTCAGGGCTGGACCCTTACCAACTCGGtcgcttataa
aaaaatgtactgTAACTTTCGAGTTCTGTaaactcatttttattttatga
gaacagttttataagaacataaggcttaatTTAGACAAAAATTTAGAACA
AAATAAGTACAATTACAGTCTCATATTTTCAAAGTTGCTTTGTCTTAGTT
TGAGACGAAACATTTTAAGTTACCAGGGACAACTTCTTTTTCCAATATTT
GTGTCAATGCAACTTTGGAATGATCCAGCCAAATATCGCACTATTCGAGT
TTAGCGCTAGTTTTATTGCGATaaatgcaaaaattttcaattctgcTAAC
AATTTAATggtcgaaagaaaaataaatcttttccAGTCGTCTGATTTCAC
GTAACGGTTTACATAAGTTgaagtaaaaaagtaaattgTCTAAAACTGCC
CGATTTCCAGGGCTCTTAAATGCGTGTAAAAATGGCTTCGAAATCCTTTT
TCACTTTGAGTAAACCTAAACGACAATAACGTGAAACCTCTTTTCCAGAT
GGAGCTGACATCAAGTTCACAGATTCAAAGAGCTTGGTCACTGTAGAATC
TGGCAATAATGTCACGTTAATGTGGAACTTGTATAACATTGAGAGGAGAA
CAACTATAGCTCTATACTTTGATAACAAAAAAAACGAGATAGGATCACTA
TCAATCTCATCGATCACAAAAAATTACACAGATTGGACACTTGATACAAA
ACCTTTGGCAACCAAGATAAAAGACTTCAAGATTGTGCTTAGTGAGGGAA
ATGGAACTTTCGGATTTGTTTTGGAAGATTTGAGATATGATGACAGTAGT
GTCTTAATTGTGACCAATGAAGACAGTAGTGGGATTAAAGCACAACACAA
GTTAACTATAAATGTTGAAGGTGGTCGACCTCTTTAATTTCTTTACTTAA
GTGCTGAAGTCCAAAGATACACCTTTTATCTCGAAACTTGAAAGAGTGGA
CACATTAGGTTAAATTCTATTCGCttcaaaaaatacactttttcgacaGG
CATTTTTAAACCAATGCTTCAATGTTAACAGATTATCTACGGTCGATAAA
AGTGACTAGGCCACTATGatttttgagaagaaaaaaattactggttattt
ttttggttttaagtATAAATTAAATGTTGAAGacgaaaaaacctgtttcg
gagatgaattaatttgaaaatttaaaacaaaaactacaTGTCGTTCCCTT
TCTTCGTCATCTCTTTGAATACTTACATTTCTACTCAGGTGGACCACATG
AGTGCGGAGTCAAATCATTACCACAAAACATCACTTGCTCACATGACCAA
GTCATTACACAAAAAATCACTCTCTGTGGAAAGCCTCAACCCGAAGTTAC
TTGGAAAATCGGGGACACAGAATTTAACGGGACAGTTGGTAAAACTGAAA
CAGATAAACATCAATACATATACACCTTGAAAACGAAACTGACGTCAGAC
ATGTGTGGAAGAAAACTTTCGTATGTAGCCAATGGTTATCATCGAAAACG
AACCGCTAGTAGTATGATACTGGTGAAAGGCTGTAAGTTTCATTTTCTTA
CAACATTTACATTCAATCCGTACCATACCTCTTTTGGTTTTATTTAAGAA
ATTTTGGGTCAGTTGGATCTTCCTTTGTTCAAGTAATTTTGCGCTATTTG
TCATTATCTAACATTTCAAACCCGGCCGTTATTTACACCACTTTTCATTA
TGTCCTCCCgcctggattcagggggggggggggggNNNNNNNNNNNNTAA
TTTTCCACCCCGGCCCGTTTTTTCCCCCCTTTTCATTTTGCTCCCCCgcc
tggattcagggggggggggtggatttTGGAGCGAAGATCAAGTATGGTTC
CTTTCAAACCTGTGAATTATCAGTAAAGAGcatcaaaaattacaattttt
taatcaaaatccaaaattgaagGCATTCTGAGGCCATTTGAATAgttttt
agacaattttttgtcaataaaattctTCATGCCCGTAATTTTTCTGAGCG
GGGGGACTCGAAAATTTTTTGGAGCCAGGGTTGGGAAAAATGAGGGGTGG
GGGGTGGAAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNATTTTAGGtattgagggggggggggttggaaccTGAAAGACACTA
CACTGTGCTTTTAGTACCAAACACTTAGTTATAAAGGACTGAAATTATGC
ACTACTAGCGTTAAGATGTTAACTTTAGACTTAGTTCCTTAGCAATTTTA
ACGACTGAAGTTAAAGTCATTGCAATTTTTACTATTTATAAGCCTAAGTA
GCAGTTATTCTAGCGGCGCTAGCTCGCGTTAAGTCAATATTGGCCAGCAG
GTAATACGAGCCGACATTAAAGGTATCGTAGCTTTTTGAGATGACTTTAT
ACCTTCTAACCACCTTGCATTTGCTCTAATGAAATCATTTTGACTTGGCA
GTGGGAATTGAAAACGTATTTCAAAGGTCAAACCAATCAGAATCCTTTAT
AAGTTGGGGCGTGAAAGATTATGGATTATGCGACGTTGAAGTACAATTTT
CATTTCCACGTACCAACATAACCACAAAGCTTGTATCGGCTTCGAACAAA
ACGTTTTCATATCGTGGCCCTCGAGCTGCAGAGGTCCAGACTCGCTACCG
TACTTTTGTTTACGTAAACTTATCACCTGGTGAAAAAATTCGCATTAGTC
AAAGCGGATGGAAAAATGTAACGATCATAAAAGAAAAGATGACAACAACA
CAAAAACCGACTCCGACAACGACGACGAAGAATAGATGGGGTGACATTGA
CAATGAAGATTCTGATGATAAAGGTATACATAATTCTTCACTGTGAATTT
GCTTTATCTTACAGTAaaggcgtacggggtttgcaatttccgaaataccg
aataattttgttaaaatttccgagattctgtaaaaaaatacttgcaattc
cgataccgattgttttgggtattttccctcgttttgactaatttttcatc
aaatttgattattCATGTTTTAATTCcaaaaaagggggataaaaacttaa
taataccgaaattctgaagcaaaaattcataaatttccgATACTGAAACA
ATTTCAGCATTCCGAAAtaaccgaaggaattttgcccgatttccgaaatt
ccgaagaaaaaaggttCGATCTCtacaattccgaaataccgtacgccccc
agTAAGTTTGGTCAGATAATAAAAACACTCGAGGGCAAAGTTTTGTCGAT
TTTCCCTTATCTCTagtttgaagaatttttttaaatctttgttgcACTTT
AATATTTGAAAACTAACCCCTCAAAATCGGTCGAGGGGAGGGGGTCCTAA
TAGCGTTCGTCTTAGGTCTCAATTTCTTATTTCTTATCAGGGAAAGGTac
aaattgcttgaaatttggTCTCTTGGTAAATGTAGATTTGTTTTCTCTTT
ATTGAGATTGTCTTGAGAAACTCTCAAGTTTGATAATAATTCAAACATtt
caattcacttttttttcaaggaGAAGTGAGCATGTTTCTTTTGGTCGGTG
ATATCATTGGATTTGTGCTCCTCTTTATTTTGTTGGGTATCTTGTGGAAG
TTGGGAAAGGTTGTGCAGCGACACCACCACAAGAGAAAAGGTTTCTTTAC
TTAAACTCGATCATCTCAAATTTACCTAGTTATAAATCAATGATGTGTCG
TTCATTATGATGTAATAaacaacccagctggcacacaacgttgtttcgac
gtttatataacgttaaaaagacgttatgaatgttagatggacgttgaaac
aatgttgtgtgccagcttggaaACCCTTTTACATTGAAGGATTGAATTGA
CTCAGATACTGATATTGACTAGTTAGAAAACGGaaaggaaaaatcttttt
ccaatGAAACATAATTAAACTAGGGGCACatctaatacaataatgaccgg
ttagtgagggctgtactgatacaataatgaccggttagtgagggctgtac
tgagaaataatgcccgaggtcaagtaacgaccgagcttgcgaggttgttg
cgttgaccgagggcaacaTTTTTAGTACAGCtcgaaaaaaccggtcatta
ttgtatttgttaaccgtttccttcagcttcaattgatttttagcgcttta
tccaggaaaaatagcgaaaaaatccgtgacgtcagaaataaaaaatgaga
gaaatgatgtcaacgcattgttaattttcctttgaaaaagtgacgtcaca
atgaattttcctgacgacgggcaactctgggcagtggtaggcccgtcgtc
atgcgaaaagaaccaattgcattgcacAAAAAGCCATGAAGCCCGCTTTg
aaaaaagtaaccggttaacaatgtcTGATATATTATTTTATCTGATAACG
AAGGTGTGAATACTCATTTAATACCTAACCTCTAATTCCttttcgatttt
cttttttagtttctGCAAAAAGGTAAGTGAATATCATTTCATTACTTCTT
GTCAGTTTGATAAAGTCTATAtaatcaatcgtaaaaggggttacgcacgg
agaacgagtctcgtgttcgcaaagcgaaagggattctatAGACGCCTCAA
GCCCACTAGTTATGTAAGGCTATCAATccgctgctcaaaagaatatcgta
ctttttttccgaaaatcccaaaccccaaagaaattccaaaaatataaaat
tccataaatataaaaattacaacttactcggaaagttaaaggaagcaaaa
taaaccgatttatgaaatgtaaaatgacaacttaaaacggatcaaaactc
aaaatactgcGAATCTTGTGACGATGACGTCANNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNGGGGAACTTCTCGACTTTCAACTATCGTCAAGCTGTAAA
CGTGTCGAATTTTCGAAGTAAGAAGTGTCAATTGTTGAAGAATCgatgct
gaaaagtcaaagaCGCAGTTTTGTGGAGAATTGGGAGAGGCACGAGagag
cttttacaaaaatccctcgttacctggtttaatcaaagacattgaaatTC
CCgtgttttcaagtttttatgcatgcattgataaaaaactgtttggtttt
cacgaaacaaacgaaagtgccgaaagctgaatttatttgctttgTGTCAC
GTGTCGTGTGTGTGtcgagtagttttgtaataatttctatatatttcatc
agttttaatttcactgactttttggaaagaatggagtaagagctcatcaa
aaagttgtttttttacgtttttccattatttatttcgagagttcagttct
tttcggctgttttgttttgattttctcacgctGCTTACCCAAATGTTAAC
CAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTCGATAAATTT
TCCGATCCAAAGAGGGGTTAGCCATttccaaactcctttccaattccatc
ttattccccataaaattcccgatagaatgaggggtcaacgaattcctttc
caatctcgagttagcgcatttcttttgttttgatgacgtcatcagctgaa
aatggctaaaaattcagccaaatttgaaagtcctactcaagccttataaa
cccttTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNt
gggtccctttacccctaatgttgtcaacagtcaattcgcgaattttgaaa
tttttgcggtcaacaggtaccttatgccccaagggtcccaaaaaaacaaa
acNNtaaatttgcgaaagattgacactgcaacgacttcttcttagaaaac
gctaattttcacgaaattttcaaagttgaaacattccagaggctaaacat
ggtggaatagcggctagacgaaaaaaaaggtgaaaaNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGTacccgcatatcattgaaattt
tgtaaattttgcttacgcgcatgcgtttgccaaaagagtcgcactccgct
cgcttacgctcgctccgtgcgtaattaTGGTCTGGCAGAGAGGAACATAC
AAGATTCTCGCTTTACATCCGTgaaatcaatcgtaaaaggggttacgcac
ggagaacgagtctcgtgttcgcaaagcgaaaggatTCTATAGAGACGCCT
CAACGCTCAAGCCCACACTAGTTATGTAAAAAGAGGTGAAGGCTATCAAT
ccgctgctcaaaagaatatcgtactctttttccgaaaaaatcccaaaccc
caaagaaattccgaaaatccaaaattccataaatctaaaaattacaactt
aaaacggatcaaaactcaaaatactgtGAATCTTGTGATNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NTACTGTGAATCTTGTGATGaggacgtcattttggccctaaatgTCGTCa
ccgaaagggtaataaatttttaactttactGAAATGAAATCGATTTCTAA
TTGATCCGTTAGATTCTATCGATGATTACCAAACCAATGAAGACTcgata
agtaatagttatcgcatgactttgagcgcaatatgagaaatattttacga
gtgaggcgagcctttttattaaacgtaaaatttaatagatttaatctatt
tacagaaagttaaaggaagcaaaaattcccgagttaaaaaaagaaaaata
actcggatagttaaaggaagcacaatTTACCGAGTTACAAAATCAAatat
aactcggaaagctaaagaaagcaaaaattccaaagttaaaaaatgaaaaa
taacttccgggtctctataatttcgaatgcttttgttcgaaaatcttgtt
agattcgaattttagattcgaacaaaaacattcgaccgaagttcctgcca
aaattatgcacatcaaaaccagaagcttcaaaataaatgcagcagctttt
tcagagatgtgaaattattatacattacagtaaacacagaaaaagaagat
gtattgtattttttcgattgagaagaaattcttcattatTGCGTTTCTCT
ATaagattgataacacttttcgatgtttttgtttcgatgtaTAGATGAGA
AAATGCATACTGGTTTAAGCTCGCTATGAATggtctgaaacaacattttt
gcaacaaaaactaattggggcgaacttctcgactttcaactatcgtcaag
ctgtaaacgtgtcgaattttcgaagtaaaaagtgttgattgttggagaat
tgatgctgaaaagtcaaagacacagTTTTGTGGAGGATTGGGAGAGACCC
Aagagactttttacaaaaatccctcgttacctggtttaatcaaagacatt
gaatttccctcgttttgttttggaaaatattcttgacaagtattaaagaa
tttcaagtttttatgcatacattgataaaaagaactgtttggttttcacg
aaacaaacgaaagtgccgaaagctgaatttatttgctttgggtcgtgtca
cgtgtgtgtcgagtagttttgtaataatttctatataattcatcagtttt
aatttcactaactttttggaaagaatggagtaagagctcatcaaaaaata
gtttttttacgtttttccatattttattccgagagttcagttcttttcgg
ctggtttgttttgattttctcatgctgcttacccaaatgttaaccaagtt
ttatttaaagtcgtcctaaggcctcataacacccctctctcattgcattc
tcgataaattttccgatccaaagaggggttagccatttccaaactccttt
ccaattccatcttattccccataaaattcccgatagaatgaggggtcaac
gacctcccaattcctttccaatctcgagttatcgcatttttttgttttga
tgacgtcatcaactgaaaatggctaaagatTCAGTCAAATTTTAAAGTCC
TATTCAAGCATTATAAACCTTTCaatctcattccccataaagttctcgat
ccaatgaggggtcaacgacctctcaACTCTtattcaaactcgagatatcg
catgttttctattttgatgacgtcatcaactgaaaatggctaaaaattca
gccaaattNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNtgaaattttgtaaattttgcttacgcgcatgcgtttgccaaaa
gagtcgcactccgctcgcttacgctcgctccgtgcgtaattaTTTTAAGT
TATCTTTTACTGAACAATGATGATAAACCACTCTTTTTCATCTGAATTGC
AGAGAAGTAGGAGAGAGCATTGACCCCAATACCCAAAGTATTTCCTCGTA
TGTTTTTGTAAAATTCTCAATTATTTTTCACgaatttctttacttttatt
ttacagATCTCGCAAGGTAATGGCAAACCGTGCATTAAAAGCGGTACAAG
ACAATGCGAAACCTTCAACAAGTAAAGCCAAAAAGTCCAAACGAAGACAG
TGAGTAAATCAAATATAAATGTACCTCTGAATTTTCCAAATGATCTATGT
ACTTGAAAAATGTAGTAAGAAAGAAGTAAAGGAATGAGTTTCTCAGGAAC
TGGATGCCGTGTCCAGTATCTTATTTCTCCATAAGTCTTCTTGCATTGAT
GCGCTCACAAGTACAGGCATTTAGATGTAACATGAGCTTTTCAAACTTTC
CCTTCTATTGCTAGGGTTGATCTAGAAGTAAGTTATGGACGCTGTGTTAT
TTAGAATTACTTCTTTTTACTGTAATAGCAGTTTTGTGTTAAAgatgttt
gtattttattgtaCTGATCTTTTTAGAGCGCAAGAAGCTGCAATCCAGGA
GCCGTTTGTTCAAGGCCAATCCACTTATGACACCGTCGCGGAACCGTATG
TGAAAATTTACTTATCCATTTTATCGCGAATACTTAGGACCAAATACGGG
AAAGAAAACTGTATTTACCTCATtccacaaattttgacatgaaTCGTGAT
TGGATATTTTCTAATTAGCTACGCAACCCTAAATATCAAACCCAATTGAT
TTTCCTTTATTTATTATGCGACATTGAATTTTAAAGGTCTAATTACTTTT
TTTAGCTTTTNGCATaccttgtaatttttttaatcgtagggcgagcatgg
ttacaatagcatacttctcctgtttctttatacctccatgatttaACAta
gttttgatatttcttttttcagggTTGGACAAAAGTCAGAGGAGGAACTA
TCGGTAATAAACATGAATGTTAATGTGATCATTTCGCTTTACACAATTTT
TTAGACCTTAAGATGATATACTGCTAAAATAACTTTTATTCAgttattct
tttgaaaaatatcctTGCATATGCCGGCCATTCTGTAGCAATATTCAATC
TTTTGAATATTTAATCCTTAATGCTGATAGTTAGTTCAAACCAATCCTCA
TATTTGATTCAATCCTAGTATTTCATTCAATTCTCATATTTCATTCAATC
TTGGATTGAATGAAATATAGGAATTGGATTGAACTAAACATTAGCATTGA
TAATTGGATTCAACCGATACAGAATGGTACAGGCATATTTGCATTTTAGg
cttcaaaatatcaaaacatttttcctCTTTATTCACAGAAACTGTACGCC
AAAGTGGACAAGTCCAAAAAGAAGAAACCACCGGTCGCAAACGTGCTTTA
TTCCGAACTCAGTGCTTTGGGTGGTCGTACTGGTGATAAAACTAATGCAC
CGAAATCTGAATATGCAGAAGCCAAAGACCTTTGACGGTTGAATTTGTAG
CGTCGCTTCTAAGctaaaatttcattcatttttgaccttatgatttttgc
ctgagaccgtcatatttgtccgaaaatcacaccaaagtgtccaaaaaaaa
attggaaacatcgtaatttcgatttctctaaggttgaagtttccaaaatt
gtataacaagtgcttctaacaaaacaatcgagcaattttacaaaatgccc
tctactaacgATAAGACTGGCTGATTTCCACATCATTTTGAGTTCGTCAT
TTATTTTTGTCACACATGGTGCCAGCTTTTGAAATTTAGGAAACCTCAGC
AGAATTTGAAGAATATTGGTCGATTCTTTTCGTGAAGACAATTCCCCgcc
tgaagcaaaaaaattgaccACAGAGGCAAGGCTTTACCgattatcttttt
tattttctgtcttttcacaataaatgcttaaccctatttttatcaagGGA
GTGTTTTCCACCACCCTGGCGCTTTTTTGTTAATGACTCacagaaagttt
tttttgacaCGTTTGATATAATCTTATTAGCCATAGGTAAAAATATACCA
GGCATGTCATataatccagctaaaaccctgtctCAAAAACgtggcataac
ttttgatatagttATCCAattaacttcaaattttgacaggttttagaaaa
tattttttaaacctaaacttttttgaatttttctagtTCTAAAGTTATTT
CGCTCAAAGAAGTTTCAAGTGTATAtaaagatattttatttttgtaaatt
ttaaggaattttttatctttataaATATCTTTGAGGGTTCATTTCgtgtt
gttgattttttatattttgatagtatttttagtcaatttttttaaagaaa
taaattaCAGAACTTTCAAGCCAGTAAGGCTCACTGTAGATCTCATTCGA
CGTAATTATGTGACTTATATTCTCCATTTTTATCAGCAAAGTAACAATTT
TCTACTGTATAGGGCGAGGCCAATTtagtttgttgttttacgggccaagc
tacccaaaaaagagggtcggtcggtcggcgaaaaaataaaagtagaattt
tacttataaaatctcctaaaaaggcagcaaaaactacttcCTCCAGACAA
AACacttttatttcgatttttggaatttcagggacggtcgggcccgtaaa
acaactaatcaaattggtctcgcctaagtatatttttttattcatggaaa
ataacaaaataactgaaaaatgGACCATTGACACGACACTATAAACCAAC
TAACAGCAATTttactgactgactgactgacatTGACAGTGAATGATTAA
ATTTATTGACAATAATGACACAGAATTTGTAAGTAGAGATTTTATTTCTT
ACTTTTGTATTGTGTTCGtattattttacatttttttgtacAGAATAAAA
CCTCCTTTAAACTCAGTAATGCTAgtctattgttttcattttcaggaaaa
aatttAAGGAAATGTTTTTCCTCATTAAGAAAAAATAGCGTTTGATAAAT
gagtttttgaatttaaaagagaaaatGATCAAACGGTTTCAATTTGTTCT
CATTTTCTTTCAGCTGAGCCAGACGATGACGTTGATGGACTTGTGGCATG
GGAAATCACACTTATCGCTCTCGCTGTTCTTTTCGTTGCGGTGGCACTCT
CTGTGTTTGCTTACACCAAATATCGAGCCCATAACCAAACAAGAGACACC
ACTGGTaagctcagtttttctttgGTAGGAGATTCAATAAAGTCACCCTG
AGATTGATGTAAAAGCGTTGTTTGAATGTGTGATACACGCtttcttataa
gaatggtgtaaatccatctCATCATggatcatggatattcttaacttttt
tgggaaaatcatcctaaaatattcttacagaaTTCTTAGgctaggatcct
aattcagactagatttaacatttattacatacgtctcaagcataaaatgg
catttttgtgaaaggagtgagccttacttgggggtaattggcaatttata
attgaaaatactctaaaaaaGGTATTCtcagcttgagtagcaaaattccg
tgatattcttagcatattcttaatcctttggccattttcattatGGACAT
TCTTAAagagtgtattcttattaaaaaaacgtgtatattgtGAGATAtga
gaaaataatcaaaataattgGAAGTGAAAAATTGTAGCATGTTATCCCTT
CATAAtcatcgtattatcatataacgtcCAATTTGTTTTACACGGATTAT
GAACGACTCTAGTCTATCTTCAAATTCAATGATAGAccgtttattttcat
tttcagctaCGAACAACGAGACTCGATCATTGAATTCGGAGAAAGTGTAA
TCTGGATCAGGTGAAAACATCTTTGGTATTTTCACTTTCCATGTATGGTG
GACTTTAAATGACACTGGTAATTGTCGATGAAGCATCTTCTGTTCTGTGA
ATGACTTTGCGAACATACAAGCGAGCACGAATTGTTTGAAATTTGTTATT
ACAAAGGAAACTCTACCATCCGCCTATATACTTGTAAAATATTATCGTAG
GAGTTGATTATCATTTTATAGATGCCGAATAAATGGTTTACCGTACGGTa
cctttgttttagttctttgtCGGGGAAGGGGGTAGCCAAGcgggcacacg
acgttgtttcaacgttcatttaacgttatatggatgttgtgaacgttaga
taaacgtcaaaaaacgtcaaaaaaacgttGTGCGCCAGCTGGGAGGTGTC
CAATTAGTTATCAATTCATTTTCAATCTATTTTACATTATCAATCTATTT
TTATTATGTCATTTTGATTGGTCCTACGCAATCTGAACGCACCTTTATTA
TTTGAGATTTACATTAACTGTTTCATTTGTAAATAGACGTTATTATGCCA
tgtcttttgatgttttttattacGATGGCAGGTAGTATAGCAGAAATTGT
CCCATTCCTCTAAAGAATACTAACATCGAGGGTCAGGAGAGGCACTGCAC
CTAAGgcgcaaaaagtaaaaaatcttcCCCGACAATTGTTTCCTAAAATT
TTAAATGGCTTGCCGGGACGGGACTCTTTCCATCTCAGAAAGTTCACCCC
TTGGTTTACCTTATTGCCCCTTTCCCTCTTAAGAATAATAAAAACGTGAA
TACTTTCCCTCTAACCCTCCCAGAAAGTTTACTCCTTGGTTAGCTACATT
GAAATATAGGGGCATTGACATTTAGCATTTCCAATGCAATTTGATGTTTG
TATGGGATGTACAGAAATGTCTACTCTAGCAGATTTAAGTAAGGAAtata
tttttaaggtttttgttttattcAGTATTCAATTTTAAGGCATTTCTTCT
TAATGTACGGTATTTTTATTTGACTTCAAAGCCCCTTCAAAGCCTGatgg
gctagactcgagactcctggaacggaaatgaagccacttatttcccatcc
agaacgcccgcgcgtggtttttacatgAACGCCggattaaaagtaaaatc
tatcgccagatttcgaaaaatgcagtcc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006224XLOC_006224Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011114-exon-sc0000121-1491911889:554063..554262TCONS_00011114-exon-sc0000121-1491911889:554063..554262Clytia hemisphaericaexon
TCONS_00011114-exon-sc0000121-1510915933:554063..554262TCONS_00011114-exon-sc0000121-1510915933:554063..554262Clytia hemisphaericaexon
TCONS_00011114-exon-sc0000121-1575043694:554063..554262TCONS_00011114-exon-sc0000121-1575043694:554063..554262Clytia hemisphaericaexon
TCONS_00011114-exon-sc0000121-1491911889:555411..555782TCONS_00011114-exon-sc0000121-1491911889:555411..555782Clytia hemisphaericaexon
TCONS_00011114-exon-sc0000121-1510915933:555411..555782TCONS_00011114-exon-sc0000121-1510915933:555411..555782Clytia hemisphaericaexon
TCONS_00011114-exon-sc0000121-1575043694:555411..555782TCONS_00011114-exon-sc0000121-1575043694:555411..555782Clytia hemisphaericaexon
TCONS_00011114-exon-sc0000121-1491911889:556151..556444TCONS_00011114-exon-sc0000121-1491911889:556151..556444Clytia hemisphaericaexon
TCONS_00011114-exon-sc0000121-1510915933:556151..556444TCONS_00011114-exon-sc0000121-1510915933:556151..556444Clytia hemisphaericaexon
TCONS_00011114-exon-sc0000121-1575043694:556151..556444TCONS_00011114-exon-sc0000121-1575043694:556151..556444Clytia hemisphaericaexon
TCONS_00011114-exon-sc0000121-1491911889:568376..568516TCONS_00011114-exon-sc0000121-1491911889:568376..568516Clytia hemisphaericaexon
TCONS_00011114-exon-sc0000121-1510915933:568376..568516TCONS_00011114-exon-sc0000121-1510915933:568376..568516Clytia hemisphaericaexon
TCONS_00011114-exon-sc0000121-1575043694:568376..568516TCONS_00011114-exon-sc0000121-1575043694:568376..568516Clytia hemisphaericaexon
TCONS_00011114-exon-sc0000121-1491911889:569119..570340TCONS_00011114-exon-sc0000121-1491911889:569119..570340Clytia hemisphaericaexon
TCONS_00011114-exon-sc0000121-1510915933:569119..570340TCONS_00011114-exon-sc0000121-1510915933:569119..570340Clytia hemisphaericaexon
TCONS_00011114-exon-sc0000121-1575043694:569119..570340TCONS_00011114-exon-sc0000121-1575043694:569119..570340Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000121supercontigsc0000121:554063..570340 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.54453	1.24682	1.38593	1.36387	0.360471	0.402875	0.738218	0.56391	1.53316	0.761406	2.14127	2.79239	9.03971	8.08998	16.646	17.3579	4.26851	5.62582	4.70872	5.44512	2.80276	2.53111	1.75087	2.61191	2.49087	4.36731	0.843125	0.948914	1.16722	1.07817
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011114 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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